RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 ZNF446Q9NWS9 450 aa20.59■□□□□ 0.89
COL20A1-205ENST00000471582 FAM53CQ9NYF3 392 aa20.59■□□□□ 0.89
COL20A1-205ENST00000471582 SPDYE4A6NLX3 237 aa20.59■□□□□ 0.89
COL20A1-205ENST00000471582 GCOM1H8Y6P7 765 aaPredicted RBP20.59■□□□□ 0.89
COL20A1-205ENST00000471582 SOCS7O14512 581 aa20.59■□□□□ 0.89
COL20A1-205ENST00000471582 POLR2MP0CAP2 368 aa20.59■□□□□ 0.89
COL20A1-205ENST00000471582 CAP2P40123 477 aa20.59■□□□□ 0.89
COL20A1-205ENST00000471582 CHMP4BP1P59074 171 aa20.59■□□□□ 0.89
COL20A1-205ENST00000471582 CBX1P83916 185 aa20.59■□□□□ 0.89
COL20A1-205ENST00000471582 GIT2Q14161 759 aa20.59■□□□□ 0.89
COL20A1-205ENST00000471582 FGFBP2Q9BYJ0 223 aa20.59■□□□□ 0.89
COL20A1-205ENST00000471582 MRPL11Q9Y3B7 192 aaKnown RBP20.59■□□□□ 0.89
COL20A1-205ENST00000471582 NPHP3-ACAD11A0A0J9YXS1 232 aa20.58■□□□□ 0.88
COL20A1-205ENST00000471582 CCDC40Q4G0X9 1142 aa20.58■□□□□ 0.88
COL20A1-205ENST00000471582 TEX35Q5T0J7 233 aa20.58■□□□□ 0.88
COL20A1-205ENST00000471582 CCDC122Q5T0U0 273 aa20.58■□□□□ 0.88
COL20A1-205ENST00000471582 KIAA1328Q86T90 577 aa20.58■□□□□ 0.88
COL20A1-205ENST00000471582 FAM207AQ9NSI2 230 aaPredicted RBP20.58■□□□□ 0.88
COL20A1-205ENST00000471582 FEM1BQ9UK73 627 aa20.58■□□□□ 0.88
COL20A1-205ENST00000471582 GUCA1BQ9UMX6 200 aa20.58■□□□□ 0.88
COL20A1-205ENST00000471582 DICER1Q9UPY3 1922 aaKnown RBP20.57■□□□□ 0.88
COL20A1-205ENST00000471582 TAL1P17542 331 aaPredicted RBP20.57■□□□□ 0.88
COL20A1-205ENST00000471582 AMPD2Q01433 879 aa20.57■□□□□ 0.88
COL20A1-205ENST00000471582 TRIM59Q8IWR1 403 aa20.57■□□□□ 0.88
COL20A1-205ENST00000471582 JAKMIP2Q96AA8 810 aa20.57■□□□□ 0.88
COL20A1-205ENST00000471582 CCDC42Q96M95 316 aa20.57■□□□□ 0.88
COL20A1-205ENST00000471582 TSGA10Q9BZW7 698 aa20.57■□□□□ 0.88
COL20A1-205ENST00000471582 DEFB129Q9H1M3 183 aa20.57■□□□□ 0.88
COL20A1-205ENST00000471582 MMRN2Q9H8L6 949 aa20.57■□□□□ 0.88
COL20A1-205ENST00000471582 PGAP2Q9UHJ9 254 aa20.57■□□□□ 0.88
COL20A1-205ENST00000471582 FAM184BQ9ULE4 1060 aa20.57■□□□□ 0.88
COL20A1-205ENST00000471582 CFBP00751 764 aa20.57■□□□□ 0.88
COL20A1-205ENST00000471582 LMNB1P20700 586 aa20.57■□□□□ 0.88
COL20A1-205ENST00000471582 GMPSP49915 693 aaPredicted RBP20.57■□□□□ 0.88
COL20A1-205ENST00000471582 PSMC6P62333 389 aa20.57■□□□□ 0.88
COL20A1-205ENST00000471582 PABPC4Q13310 644 aaKnown RBP eCLIP20.57■□□□□ 0.88
COL20A1-205ENST00000471582 BMS1Q14692 1282 aaKnown RBP20.57■□□□□ 0.88
COL20A1-205ENST00000471582 MIGA2Q7L4E1 593 aa20.57■□□□□ 0.88
COL20A1-205ENST00000471582 CYP2W1Q8TAV3 490 aa20.57■□□□□ 0.88
COL20A1-205ENST00000471582 EIF2AK1Q9BQI3 630 aaKnown RBP20.57■□□□□ 0.88
COL20A1-205ENST00000471582 SYT17Q9BSW7 474 aa20.57■□□□□ 0.88
COL20A1-205ENST00000471582 NUCKS1Q9H1E3 243 aaKnown RBP20.57■□□□□ 0.88
COL20A1-205ENST00000471582 TUFT1Q9NNX1 390 aa20.57■□□□□ 0.88
COL20A1-205ENST00000471582 TBC1D7Q9P0N9 293 aa20.57■□□□□ 0.88
COL20A1-205ENST00000471582 EPHB6O15197 1021 aa20.56■□□□□ 0.88
COL20A1-205ENST00000471582 LCA5LO95447 670 aa20.56■□□□□ 0.88
COL20A1-205ENST00000471582 EYA4O95677 639 aa20.56■□□□□ 0.88
COL20A1-205ENST00000471582 ASNSP08243 561 aa20.56■□□□□ 0.88
COL20A1-205ENST00000471582 MUTP22033 750 aa20.56■□□□□ 0.88
COL20A1-205ENST00000471582 CACNB1Q02641 598 aaPredicted RBP20.56■□□□□ 0.88
COL20A1-205ENST00000471582 TMCO3Q6UWJ1 677 aa20.56■□□□□ 0.88
COL20A1-205ENST00000471582 EPM2AIP1Q7L775 607 aaPredicted RBP20.56■□□□□ 0.88
COL20A1-205ENST00000471582 SMAP1Q8IYB5 467 aaPredicted RBP20.56■□□□□ 0.88
COL20A1-205ENST00000471582 NEK11Q8NG66 645 aa20.56■□□□□ 0.88
COL20A1-205ENST00000471582 BAP1Q92560 729 aa20.56■□□□□ 0.88
COL20A1-205ENST00000471582 REEP2Q9BRK0 252 aa20.56■□□□□ 0.88
COL20A1-205ENST00000471582 TRAF3IP3Q9Y228 551 aa20.56■□□□□ 0.88
COL20A1-205ENST00000471582 GJA3Q9Y6H8 435 aa20.56■□□□□ 0.88
COL20A1-205ENST00000471582 ATAD5Q96QE3 1844 aa20.55■□□□□ 0.88
COL20A1-205ENST00000471582 SHTN1A0MZ66 631 aa20.55■□□□□ 0.88
COL20A1-205ENST00000471582 MEIS1O00470 390 aa20.55■□□□□ 0.88
COL20A1-205ENST00000471582 ZRANB2O95218 330 aaKnown RBP eCLIP20.55■□□□□ 0.88
COL20A1-205ENST00000471582 VAV2P52735 878 aa20.55■□□□□ 0.88
COL20A1-205ENST00000471582 PPP2R5CQ13362 524 aa20.55■□□□□ 0.88
COL20A1-205ENST00000471582 RASA3Q14644 834 aa20.55■□□□□ 0.88
COL20A1-205ENST00000471582 SPA17Q15506 151 aa20.55■□□□□ 0.88
COL20A1-205ENST00000471582 BMT2Q1RMZ1 405 aa20.55■□□□□ 0.88
COL20A1-205ENST00000471582 CCDC174Q6PII3 467 aa20.55■□□□□ 0.88
COL20A1-205ENST00000471582 NELFCDQ8IXH7 590 aa20.55■□□□□ 0.88
COL20A1-205ENST00000471582 MICALL2Q8IY33 904 aa20.55■□□□□ 0.88
COL20A1-205ENST00000471582 KRT222Q8N1A0 295 aa20.55■□□□□ 0.88
COL20A1-205ENST00000471582 SLC5A5Q92911 643 aa20.55■□□□□ 0.88
COL20A1-205ENST00000471582 PURBQ96QR8 312 aaKnown RBP20.55■□□□□ 0.88
COL20A1-205ENST00000471582 HSD17B14Q9BPX1 270 aa20.55■□□□□ 0.88
COL20A1-205ENST00000471582 WDR18Q9BV38 432 aa20.55■□□□□ 0.88
COL20A1-205ENST00000471582 TRIM10Q9UDY6 481 aa20.55■□□□□ 0.88
COL20A1-205ENST00000471582 ZNF541Q9H0D2 1346 aa20.55■□□□□ 0.88
COL20A1-205ENST00000471582 POTEB2H3BUK9 544 aa20.55■□□□□ 0.88
COL20A1-205ENST00000471582 ATP8B1O43520 1251 aa20.55■□□□□ 0.88
COL20A1-205ENST00000471582 PSMD10O75832 226 aa20.55■□□□□ 0.88
COL20A1-205ENST00000471582 OTOP1Q7RTM1 612 aa20.55■□□□□ 0.88
COL20A1-205ENST00000471582 CDAN1Q8IWY9 1227 aa20.55■□□□□ 0.88
COL20A1-205ENST00000471582 SYN2Q92777 582 aaPredicted RBP20.55■□□□□ 0.88
COL20A1-205ENST00000471582 TANGO6Q9C0B7 1094 aa20.55■□□□□ 0.88
COL20A1-205ENST00000471582 ARHGAP20Q9P2F6 1191 aa20.55■□□□□ 0.88
COL20A1-205ENST00000471582 MYO6Q9UM54 1294 aa20.55■□□□□ 0.88
COL20A1-205ENST00000471582 RABGAP1Q9Y3P9 1069 aa20.55■□□□□ 0.88
COL20A1-205ENST00000471582 SMCHD1A6NHR9 2005 aa20.54■□□□□ 0.88
COL20A1-205ENST00000471582 CETN3O15182 167 aa20.54■□□□□ 0.88
COL20A1-205ENST00000471582 SETQ01105 290 aaPredicted RBP20.54■□□□□ 0.88
COL20A1-205ENST00000471582 RAD51AP2Q09MP3 1159 aa20.54■□□□□ 0.88
COL20A1-205ENST00000471582 LRCH2Q5VUJ6 765 aa20.54■□□□□ 0.88
COL20A1-205ENST00000471582 PDXDC1Q6P996 788 aa20.54■□□□□ 0.88
COL20A1-205ENST00000471582 CEP72Q9P209 647 aa20.54■□□□□ 0.88
COL20A1-205ENST00000471582 CNOT7Q9UIV1 285 aaKnown RBP20.54■□□□□ 0.88
COL20A1-205ENST00000471582 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.54■□□□□ 0.88
COL20A1-205ENST00000471582 ANO9A1A5B4 782 aa20.53■□□□□ 0.88
COL20A1-205ENST00000471582 LRRC53A6NM62 1247 aa20.53■□□□□ 0.88
COL20A1-205ENST00000471582 EML1O00423 815 aa20.53■□□□□ 0.88
COL20A1-205ENST00000471582 KCNMA1Q12791 1236 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms