RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 CNGA1P29973 690 aa19.59■□□□□ 0.73
HSPG2-208ENST00000471322 ZNF75DP51815 510 aa19.59■□□□□ 0.73
HSPG2-208ENST00000471322 AMPD3Q01432 767 aa19.59■□□□□ 0.73
HSPG2-208ENST00000471322 KRT79Q5XKE5 535 aa19.59■□□□□ 0.73
HSPG2-208ENST00000471322 RNF207Q6ZRF8 634 aa19.59■□□□□ 0.73
HSPG2-208ENST00000471322 PLA2G4DQ86XP0 818 aa19.59■□□□□ 0.73
HSPG2-208ENST00000471322 TRMT44Q8IYL2 757 aaKnown RBP19.59■□□□□ 0.73
HSPG2-208ENST00000471322 DEFB118Q96PH6 123 aa19.59■□□□□ 0.73
HSPG2-208ENST00000471322 KBTBD4Q9NVX7 518 aa19.59■□□□□ 0.73
HSPG2-208ENST00000471322 PCDHA12Q9UN75 941 aa19.59■□□□□ 0.73
HSPG2-208ENST00000471322 STK24Q9Y6E0 443 aa19.59■□□□□ 0.73
HSPG2-208ENST00000471322 ASTN1O14525 1302 aa19.58■□□□□ 0.73
HSPG2-208ENST00000471322 SOWAHBA6NEL2 793 aa19.58■□□□□ 0.73
HSPG2-208ENST00000471322 EN2P19622 333 aaPredicted RBP19.58■□□□□ 0.73
HSPG2-208ENST00000471322 BMP6P22004 513 aa19.58■□□□□ 0.73
HSPG2-208ENST00000471322 CDC25BP30305 580 aa19.58■□□□□ 0.73
HSPG2-208ENST00000471322 RPS6P62753 249 aaKnown RBP19.58■□□□□ 0.73
HSPG2-208ENST00000471322 MAP3K21Q5TCX8 1036 aa19.58■□□□□ 0.73
HSPG2-208ENST00000471322 OLFML2BQ68BL8 750 aa19.58■□□□□ 0.73
HSPG2-208ENST00000471322 MCF2L2Q86YR7 1114 aa19.58■□□□□ 0.73
HSPG2-208ENST00000471322 TRPV1Q8NER1 839 aa19.58■□□□□ 0.73
HSPG2-208ENST00000471322 HAS1Q92839 578 aa19.58■□□□□ 0.73
HSPG2-208ENST00000471322 TINF2Q9BSI4 451 aa19.58■□□□□ 0.73
HSPG2-208ENST00000471322 GTPBP4Q9BZE4 634 aaKnown RBP19.58■□□□□ 0.73
HSPG2-208ENST00000471322 HMX1Q9NP08 348 aaPredicted RBP19.58■□□□□ 0.73
HSPG2-208ENST00000471322 KCNMB3Q9NPA1 279 aa19.58■□□□□ 0.73
HSPG2-208ENST00000471322 STK17AQ9UEE5 414 aa19.58■□□□□ 0.73
HSPG2-208ENST00000471322 PLXNA1Q9UIW2 1896 aa19.58■□□□□ 0.73
HSPG2-208ENST00000471322 RPTORQ8N122 1335 aa19.58■□□□□ 0.72
HSPG2-208ENST00000471322 CFBP00751 764 aa19.58■□□□□ 0.72
HSPG2-208ENST00000471322 PLCG1P19174 1290 aa19.58■□□□□ 0.72
HSPG2-208ENST00000471322 NCAPHQ15003 741 aa19.58■□□□□ 0.72
HSPG2-208ENST00000471322 NAALADL2Q58DX5 795 aa19.58■□□□□ 0.72
HSPG2-208ENST00000471322 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.58■□□□□ 0.727e-6■□□□□ 10.8
HSPG2-208ENST00000471322 FAM133AQ8N9E0 248 aa19.58■□□□□ 0.72
HSPG2-208ENST00000471322 MRFAP1L1Q96HT8 127 aa19.58■□□□□ 0.72
HSPG2-208ENST00000471322 CDK5RAP3Q96JB5 506 aa19.58■□□□□ 0.72
HSPG2-208ENST00000471322 FAM20AQ96MK3 541 aa19.58■□□□□ 0.72
HSPG2-208ENST00000471322 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.58■□□□□ 0.72
HSPG2-208ENST00000471322 MAP3K20Q9NYL2 800 aaKnown RBP19.58■□□□□ 0.72
HSPG2-208ENST00000471322 IGHA2P01877 340 aa19.57■□□□□ 0.72
HSPG2-208ENST00000471322 HOXA13P31271 388 aaPredicted RBP19.57■□□□□ 0.72
HSPG2-208ENST00000471322 ENOX1Q8TC92 643 aaKnown RBP19.57■□□□□ 0.72
HSPG2-208ENST00000471322 CCDC47Q96A33 483 aaKnown RBP19.57■□□□□ 0.72
HSPG2-208ENST00000471322 MTRQ99707 1265 aa19.57■□□□□ 0.72
HSPG2-208ENST00000471322 MMTAG2Q9BU76 263 aaKnown RBP19.57■□□□□ 0.72
HSPG2-208ENST00000471322 LRRC27Q9C0I9 530 aa19.57■□□□□ 0.72
HSPG2-208ENST00000471322 DIS3Q9Y2L1 958 aaKnown RBP19.57■□□□□ 0.72
HSPG2-208ENST00000471322 TNRC18O15417 2968 aaPredicted RBP19.56■□□□□ 0.72
HSPG2-208ENST00000471322 ESPNB1AK53 854 aa19.56■□□□□ 0.72
HSPG2-208ENST00000471322 ZNF76P36508 570 aa19.56■□□□□ 0.72
HSPG2-208ENST00000471322 ZSCAN30Q86W11 494 aa19.56■□□□□ 0.72
HSPG2-208ENST00000471322 RPN1P04843 607 aaKnown RBP19.55■□□□□ 0.72
HSPG2-208ENST00000471322 CUL4BQ13620 913 aa19.55■□□□□ 0.72
HSPG2-208ENST00000471322 KCNB1Q14721 858 aa19.55■□□□□ 0.72
HSPG2-208ENST00000471322 ARMCX2Q7L311 632 aa19.55■□□□□ 0.72
HSPG2-208ENST00000471322 FCHSD1Q86WN1 690 aa19.55■□□□□ 0.72
HSPG2-208ENST00000471322 U2AF1L4Q8WU68 220 aaKnown RBP19.55■□□□□ 0.72
HSPG2-208ENST00000471322 PAK6Q9NQU5 681 aaPredicted RBP19.55■□□□□ 0.72
HSPG2-208ENST00000471322 COL20A1Q9P218 1284 aa19.55■□□□□ 0.72
HSPG2-208ENST00000471322 KDM3AQ9Y4C1 1321 aa19.55■□□□□ 0.72
HSPG2-208ENST00000471322 SNAI1O95863 264 aaPredicted RBP19.54■□□□□ 0.72
HSPG2-208ENST00000471322 GJB1P08034 283 aa19.54■□□□□ 0.72
HSPG2-208ENST00000471322 CYBAP13498 195 aa19.54■□□□□ 0.72
HSPG2-208ENST00000471322 GHRHRQ02643 423 aa19.54■□□□□ 0.72
HSPG2-208ENST00000471322 PRR16Q569H4 304 aa19.54■□□□□ 0.72
HSPG2-208ENST00000471322 SV2BQ7L1I2 683 aa19.54■□□□□ 0.72
HSPG2-208ENST00000471322 EEPD1Q7L9B9 569 aa19.54■□□□□ 0.72
HSPG2-208ENST00000471322 DRC7Q8IY82 874 aa19.54■□□□□ 0.72
HSPG2-208ENST00000471322 SNX29Q8TEQ0 813 aa19.54■□□□□ 0.72
HSPG2-208ENST00000471322 STAMQ92783 540 aa19.54■□□□□ 0.72
HSPG2-208ENST00000471322 C7orf25Q9BPX7 421 aa19.54■□□□□ 0.72
HSPG2-208ENST00000471322 NT5C3AQ9H0P0 336 aa19.54■□□□□ 0.72
HSPG2-208ENST00000471322 BLZF1Q9H2G9 400 aa19.54■□□□□ 0.72
HSPG2-208ENST00000471322 MCM3APO60318 1980 aa19.54■□□□□ 0.72
HSPG2-208ENST00000471322 HSD17B4P51659 736 aa19.54■□□□□ 0.72
HSPG2-208ENST00000471322 ZNF658Q5TYW1 1059 aaPredicted RBP19.54■□□□□ 0.72
HSPG2-208ENST00000471322 ETNPPLQ8TBG4 499 aa19.54■□□□□ 0.72
HSPG2-208ENST00000471322 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.54■□□□□ 0.72
HSPG2-208ENST00000471322 ZHX1Q9UKY1 873 aaPredicted RBP19.54■□□□□ 0.72
HSPG2-208ENST00000471322 LCTP09848 1927 aa19.53■□□□□ 0.72
HSPG2-208ENST00000471322 TFRCP02786 760 aaKnown RBP19.53■□□□□ 0.72
HSPG2-208ENST00000471322 CASP1P29466 404 aa19.53■□□□□ 0.72
HSPG2-208ENST00000471322 GRB10Q13322 594 aa19.53■□□□□ 0.72
HSPG2-208ENST00000471322 HYIQ5T013 277 aa19.53■□□□□ 0.72
HSPG2-208ENST00000471322 MAMDC4Q6UXC1 1216 aa19.53■□□□□ 0.72
HSPG2-208ENST00000471322 ERMNQ8TAM6 284 aa19.53■□□□□ 0.72
HSPG2-208ENST00000471322 SYTL5Q8TDW5 730 aaPredicted RBP19.53■□□□□ 0.72
HSPG2-208ENST00000471322 LENG1Q96BZ8 264 aaPredicted RBP19.53■□□□□ 0.72
HSPG2-208ENST00000471322 TAAR1Q96RJ0 339 aa19.53■□□□□ 0.72
HSPG2-208ENST00000471322 PLIN2Q99541 437 aa19.53■□□□□ 0.72
HSPG2-208ENST00000471322 POTEMA6NI47 508 aa19.52■□□□□ 0.72
HSPG2-208ENST00000471322 FAM86B1E9PN63 330 aa19.52■□□□□ 0.72
HSPG2-208ENST00000471322 CBFA2T2O43439 604 aa19.52■□□□□ 0.72
HSPG2-208ENST00000471322 SGPL1O95470 568 aa19.52■□□□□ 0.72
HSPG2-208ENST00000471322 FAM86B2P0C5J1 330 aa19.52■□□□□ 0.72
HSPG2-208ENST00000471322 GJA8P48165 433 aa19.52■□□□□ 0.72
HSPG2-208ENST00000471322 ALDH5A1P51649 535 aaPredicted RBP19.52■□□□□ 0.72
HSPG2-208ENST00000471322 TMEM119Q4V9L6 283 aa19.52■□□□□ 0.72
HSPG2-208ENST00000471322 ZNF467Q7Z7K2 595 aaPredicted RBP19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms