RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 RSPH10BP0C881 870 aa15.42■□□□□ 0.06
HMGN1-211ENST00000471260 ADD1P35611 737 aaKnown RBP15.42■□□□□ 0.06
HMGN1-211ENST00000471260 THPOP40225 353 aa15.42■□□□□ 0.06
HMGN1-211ENST00000471260 WDR5P61964 334 aaKnown RBP15.42■□□□□ 0.06
HMGN1-211ENST00000471260 ADAM17P78536 824 aa15.42■□□□□ 0.06
HMGN1-211ENST00000471260 APOBRQ0VD83 1088 aa15.42■□□□□ 0.06
HMGN1-211ENST00000471260 UTP14CQ5TAP6 766 aaKnown RBP15.42■□□□□ 0.06
HMGN1-211ENST00000471260 CCDC12Q8WUD4 166 aaPredicted RBP15.42■□□□□ 0.06
HMGN1-211ENST00000471260 TNPO1Q92973 898 aaKnown RBP15.42■□□□□ 0.06
HMGN1-211ENST00000471260 WNT8BQ93098 351 aa15.42■□□□□ 0.06
HMGN1-211ENST00000471260 KCNH7Q9NS40 1196 aa15.42■□□□□ 0.06
HMGN1-211ENST00000471260 ERAP1Q9NZ08 941 aa15.42■□□□□ 0.06
HMGN1-211ENST00000471260 NAP1L2Q9ULW6 460 aaPredicted RBP15.42■□□□□ 0.06
HMGN1-211ENST00000471260 NFASCO94856 1347 aa15.42■□□□□ 0.06
HMGN1-211ENST00000471260 ESYT2A0FGR8 921 aa15.41■□□□□ 0.06
HMGN1-211ENST00000471260 TREHO43280 583 aa15.41■□□□□ 0.06
HMGN1-211ENST00000471260 PRPF3O43395 683 aaKnown RBP15.41■□□□□ 0.06
HMGN1-211ENST00000471260 LGR5O75473 907 aa15.41■□□□□ 0.06
HMGN1-211ENST00000471260 SCG2P13521 617 aa15.41■□□□□ 0.06
HMGN1-211ENST00000471260 CPA1P15085 419 aa15.41■□□□□ 0.06
HMGN1-211ENST00000471260 SREBF1P36956 1147 aa15.41■□□□□ 0.06
HMGN1-211ENST00000471260 EVCP57679 992 aa15.41■□□□□ 0.06
HMGN1-211ENST00000471260 SP4Q02446 784 aa15.41■□□□□ 0.06
HMGN1-211ENST00000471260 CEP55Q53EZ4 464 aa15.41■□□□□ 0.06
HMGN1-211ENST00000471260 NIPA1Q7RTP0 329 aa15.41■□□□□ 0.06
HMGN1-211ENST00000471260 RPAINQ86UA6 219 aa15.41■□□□□ 0.06
HMGN1-211ENST00000471260 ZMYND12Q9H0C1 365 aa15.41■□□□□ 0.06
HMGN1-211ENST00000471260 SMARCAD1Q9H4L7 1026 aa15.41■□□□□ 0.06
HMGN1-211ENST00000471260 JPH1Q9HDC5 661 aaPredicted RBP15.41■□□□□ 0.06
HMGN1-211ENST00000471260 SETD4Q9NVD3 440 aa15.41■□□□□ 0.06
HMGN1-211ENST00000471260 GBF1Q92538 1859 aa15.41■□□□□ 0.06
HMGN1-211ENST00000471260 GSTTP1A0A1W2PQM5 241 aa15.4■□□□□ 0.06
HMGN1-211ENST00000471260 RPLP2P05387 115 aaKnown RBP15.4■□□□□ 0.06
HMGN1-211ENST00000471260 CA3P07451 260 aa15.4■□□□□ 0.06
HMGN1-211ENST00000471260 MYOGP15173 224 aa15.4■□□□□ 0.06
HMGN1-211ENST00000471260 GNA11P29992 359 aa15.4■□□□□ 0.06
HMGN1-211ENST00000471260 AKAP17AQ02040 695 aaKnown RBP15.4■□□□□ 0.06
HMGN1-211ENST00000471260 MBTPS1Q14703 1052 aa15.4■□□□□ 0.06
HMGN1-211ENST00000471260 TAF2Q6P1X5 1199 aa15.4■□□□□ 0.06
HMGN1-211ENST00000471260 RUFY3Q7L099 469 aa15.4■□□□□ 0.06
HMGN1-211ENST00000471260 TRIM50Q86XT4 487 aa15.4■□□□□ 0.06
HMGN1-211ENST00000471260 SDF4Q9BRK5 362 aa15.4■□□□□ 0.06
HMGN1-211ENST00000471260 RNF26Q9BY78 433 aaPredicted RBP15.4■□□□□ 0.06
HMGN1-211ENST00000471260 ANO3Q9BYT9 981 aa15.4■□□□□ 0.06
HMGN1-211ENST00000471260 C6orf50Q9HD87 102 aa15.4■□□□□ 0.06
HMGN1-211ENST00000471260 SLC9A2Q9UBY0 812 aa15.4■□□□□ 0.06
HMGN1-211ENST00000471260 DOCK5Q9H7D0 1870 aa15.4■□□□□ 0.06
HMGN1-211ENST00000471260 KAT6AQ92794 2004 aa15.39■□□□□ 0.05
HMGN1-211ENST00000471260 MEIS1O00470 390 aa15.39■□□□□ 0.05
HMGN1-211ENST00000471260 TLL1O43897 1013 aa15.39■□□□□ 0.05
HMGN1-211ENST00000471260 CYP3A4P08684 503 aa15.39■□□□□ 0.05
HMGN1-211ENST00000471260 POU3F3P20264 500 aaPredicted RBP15.39■□□□□ 0.05
HMGN1-211ENST00000471260 ARHGAP4P98171 946 aa15.39■□□□□ 0.05
HMGN1-211ENST00000471260 ADGRE1Q14246 886 aa15.39■□□□□ 0.05
HMGN1-211ENST00000471260 PLEKHG4Q58EX7 1191 aa15.39■□□□□ 0.05
HMGN1-211ENST00000471260 FAM26DQ5JW98 314 aa15.39■□□□□ 0.05
HMGN1-211ENST00000471260 LMBR1Q8WVP7 490 aa15.39■□□□□ 0.05
HMGN1-211ENST00000471260 GLG1Q92896 1179 aa15.39■□□□□ 0.05
HMGN1-211ENST00000471260 TM6SF1Q9BZW5 370 aa15.39■□□□□ 0.05
HMGN1-211ENST00000471260 ZSWIM6Q9HCJ5 1215 aa15.39■□□□□ 0.05
HMGN1-211ENST00000471260 TELO2Q9Y4R8 837 aa15.39■□□□□ 0.05
HMGN1-211ENST00000471260 RRN3P2A6NIE6 340 aa15.38■□□□□ 0.05
HMGN1-211ENST00000471260 GJB5O95377 273 aa15.38■□□□□ 0.05
HMGN1-211ENST00000471260 IFNAR1P17181 557 aa15.38■□□□□ 0.05
HMGN1-211ENST00000471260 ZNF76P36508 570 aa15.38■□□□□ 0.05
HMGN1-211ENST00000471260 SLC26A2P50443 739 aa15.38■□□□□ 0.05
HMGN1-211ENST00000471260 PPFIA1Q13136 1202 aa15.38■□□□□ 0.05
HMGN1-211ENST00000471260 NTRK3Q16288 839 aa15.38■□□□□ 0.05
HMGN1-211ENST00000471260 PKN1Q16512 942 aa15.38■□□□□ 0.05
HMGN1-211ENST00000471260 PLPPR4Q7Z2D5 763 aa15.38■□□□□ 0.05
HMGN1-211ENST00000471260 RSPH3Q86UC2 560 aa15.38■□□□□ 0.05
HMGN1-211ENST00000471260 CCDC148Q8NFR7 591 aa15.38■□□□□ 0.05
HMGN1-211ENST00000471260 DBF4BQ8NFT6 615 aa15.38■□□□□ 0.05
HMGN1-211ENST00000471260 CYP2W1Q8TAV3 490 aa15.38■□□□□ 0.05
HMGN1-211ENST00000471260 BICD2Q8TD16 824 aa15.38■□□□□ 0.05
HMGN1-211ENST00000471260 APBB2Q92870 758 aa15.38■□□□□ 0.05
HMGN1-211ENST00000471260 RAD9AQ99638 391 aa15.38■□□□□ 0.05
HMGN1-211ENST00000471260 ZBED2Q9BTP6 218 aa15.38■□□□□ 0.05
HMGN1-211ENST00000471260 AZI2Q9H6S1 392 aa15.38■□□□□ 0.05
HMGN1-211ENST00000471260 AGO4Q9HCK5 861 aaKnown RBP15.38■□□□□ 0.05
HMGN1-211ENST00000471260 UNC80Q8N2C7 3258 aa15.37■□□□□ 0.05
HMGN1-211ENST00000471260 MBLAC1A4D2B0 266 aaPredicted RBP15.37■□□□□ 0.05
HMGN1-211ENST00000471260 ATG7O95352 703 aa15.37■□□□□ 0.05
HMGN1-211ENST00000471260 IGFBP4P22692 258 aa15.37■□□□□ 0.05
HMGN1-211ENST00000471260 PDIA3P30101 505 aaKnown RBP15.37■□□□□ 0.05
HMGN1-211ENST00000471260 DEFB103AP81534 67 aa15.37■□□□□ 0.05
HMGN1-211ENST00000471260 TAP1Q03518 808 aa15.37■□□□□ 0.05
HMGN1-211ENST00000471260 MKRN4PQ13434 485 aaPredicted RBP15.37■□□□□ 0.05
HMGN1-211ENST00000471260 POTEDQ86YR6 584 aa15.37■□□□□ 0.05
HMGN1-211ENST00000471260 REXO1Q8N1G1 1221 aaKnown RBP15.37■□□□□ 0.05
HMGN1-211ENST00000471260 CRYGNQ8WXF5 182 aa15.37■□□□□ 0.05
HMGN1-211ENST00000471260 SEPT8Q92599 483 aa15.37■□□□□ 0.05
HMGN1-211ENST00000471260 ZNF274Q96GC6 653 aaPredicted RBP15.37■□□□□ 0.05
HMGN1-211ENST00000471260 PGBD1Q96JS3 809 aa15.37■□□□□ 0.05
HMGN1-211ENST00000471260 TMEM260Q9NX78 707 aa15.37■□□□□ 0.05
HMGN1-211ENST00000471260 PKD2L1Q9P0L9 805 aa15.37■□□□□ 0.05
HMGN1-211ENST00000471260 DAXXQ9UER7 740 aaPredicted RBP15.37■□□□□ 0.05
HMGN1-211ENST00000471260 CYP46A1Q9Y6A2 500 aa15.37■□□□□ 0.05
HMGN1-211ENST00000471260 EYSQ5T1H1 3165 aa15.36■□□□□ 0.05
HMGN1-211ENST00000471260 A0A0C4DFX4 3053 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms