RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 NEK9Q8TD19 979 aa10.44□□□□□ -0.74
SF3A1-206ENST00000471037 SEPT8Q92599 483 aa10.44□□□□□ -0.74
SF3A1-206ENST00000471037 GPKOWQ92917 476 aaPredicted RBP eCLIP10.44□□□□□ -0.74
SF3A1-206ENST00000471037 TOP1MTQ969P6 601 aa10.44□□□□□ -0.74
SF3A1-206ENST00000471037 JAKMIP1Q96N16 626 aaKnown RBP10.44□□□□□ -0.74
SF3A1-206ENST00000471037 NEK1Q96PY6 1258 aa10.44□□□□□ -0.74
SF3A1-206ENST00000471037 PIGSQ96S52 555 aa10.44□□□□□ -0.74
SF3A1-206ENST00000471037 ZSWIM6Q9HCJ5 1215 aa10.44□□□□□ -0.74
SF3A1-206ENST00000471037 TAF6LQ9Y6J9 622 aa10.44□□□□□ -0.74
SF3A1-206ENST00000471037 PNMA6FA0A0J9YX94 578 aa10.43□□□□□ -0.74
SF3A1-206ENST00000471037 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.43□□□□□ -0.74
SF3A1-206ENST00000471037 SPATA31C2B4DYI2 1134 aa10.43□□□□□ -0.74
SF3A1-206ENST00000471037 RBAK-RBAKDNI3L0D1 243 aa10.43□□□□□ -0.74
SF3A1-206ENST00000471037 NOP56O00567 594 aaKnown RBP10.43□□□□□ -0.74
SF3A1-206ENST00000471037 CYTH3O43739 400 aa10.43□□□□□ -0.74
SF3A1-206ENST00000471037 GNAT1P11488 350 aa10.43□□□□□ -0.74
SF3A1-206ENST00000471037 IL9P15248 144 aa10.43□□□□□ -0.74
SF3A1-206ENST00000471037 ADAM17P78536 824 aa10.43□□□□□ -0.74
SF3A1-206ENST00000471037 MRPS9P82933 396 aaKnown RBP10.43□□□□□ -0.74
SF3A1-206ENST00000471037 TROAPQ12815 778 aa10.43□□□□□ -0.74
SF3A1-206ENST00000471037 PTCRAQ6ISU1 281 aaPredicted RBP10.43□□□□□ -0.74
SF3A1-206ENST00000471037 RUFY3Q7L099 469 aa10.43□□□□□ -0.74
SF3A1-206ENST00000471037 FCHSD1Q86WN1 690 aa10.43□□□□□ -0.74
SF3A1-206ENST00000471037 APBB2Q92870 758 aa10.43□□□□□ -0.74
SF3A1-206ENST00000471037 YME1L1Q96TA2 773 aa10.43□□□□□ -0.74
SF3A1-206ENST00000471037 GPR20Q99678 358 aa10.43□□□□□ -0.74
SF3A1-206ENST00000471037 BCAS3Q9H6U6 928 aa10.43□□□□□ -0.74
SF3A1-206ENST00000471037 CYP46A1Q9Y6A2 500 aa10.43□□□□□ -0.74
SF3A1-206ENST00000471037 GRXCR2A6NFK2 248 aa10.42□□□□□ -0.74
SF3A1-206ENST00000471037 PRR33A8MZF0 331 aa10.42□□□□□ -0.74
SF3A1-206ENST00000471037 FIBPO43427 364 aa10.42□□□□□ -0.74
SF3A1-206ENST00000471037 ST18O60284 1047 aa10.42□□□□□ -0.74
SF3A1-206ENST00000471037 CTSHP09668 335 aa10.42□□□□□ -0.74
SF3A1-206ENST00000471037 RPS6KB1P23443 525 aa10.42□□□□□ -0.74
SF3A1-206ENST00000471037 NEK4P51957 841 aa10.42□□□□□ -0.74
SF3A1-206ENST00000471037 SEMA3FQ13275 785 aa10.42□□□□□ -0.74
SF3A1-206ENST00000471037 GPM6BQ13491 265 aa10.42□□□□□ -0.74
SF3A1-206ENST00000471037 FAM26DQ5JW98 314 aa10.42□□□□□ -0.74
SF3A1-206ENST00000471037 CYFIP1Q7L576 1253 aa10.42□□□□□ -0.74
SF3A1-206ENST00000471037 DHX32Q7L7V1 743 aaKnown RBP10.42□□□□□ -0.74
SF3A1-206ENST00000471037 TMEM192Q8IY95 271 aa10.42□□□□□ -0.74
SF3A1-206ENST00000471037 BANK1Q8NDB2 785 aa10.42□□□□□ -0.74
SF3A1-206ENST00000471037 PABPC5Q96DU9 382 aaKnown RBP10.42□□□□□ -0.74
SF3A1-206ENST00000471037 ZFP91Q96JP5 570 aaPredicted RBP10.42□□□□□ -0.74
SF3A1-206ENST00000471037 SENP7Q9BQF6 1050 aa10.42□□□□□ -0.74
SF3A1-206ENST00000471037 OSBPL7Q9BZF2 842 aa10.42□□□□□ -0.74
SF3A1-206ENST00000471037 UPF3BQ9BZI7 483 aaKnown RBP10.42□□□□□ -0.74
SF3A1-206ENST00000471037 SETD4Q9NVD3 440 aa10.42□□□□□ -0.74
SF3A1-206ENST00000471037 ZNF215Q9UL58 517 aaPredicted RBP10.42□□□□□ -0.74
SF3A1-206ENST00000471037 NRCAMQ92823 1304 aa10.41□□□□□ -0.74
SF3A1-206ENST00000471037 RALGAPA2Q2PPJ7 1873 aa10.41□□□□□ -0.74
SF3A1-206ENST00000471037 ERICH2A1L162 156 aa10.41□□□□□ -0.74
SF3A1-206ENST00000471037 FAM86C2PA6NEL3 165 aa10.41□□□□□ -0.74
SF3A1-206ENST00000471037 C5orf67F2Z3F1 127 aa10.41□□□□□ -0.74
SF3A1-206ENST00000471037 IFIT3O14879 490 aaKnown RBP10.41□□□□□ -0.74
SF3A1-206ENST00000471037 MCM5P33992 734 aa10.41□□□□□ -0.74
SF3A1-206ENST00000471037 MCM2P49736 904 aa10.41□□□□□ -0.74
SF3A1-206ENST00000471037 PCNX4Q63HM2 1172 aa10.41□□□□□ -0.74
SF3A1-206ENST00000471037 XRRA1Q6P2D8 792 aa10.41□□□□□ -0.74
SF3A1-206ENST00000471037 RPAINQ86UA6 219 aa10.41□□□□□ -0.74
SF3A1-206ENST00000471037 TRIM50Q86XT4 487 aa10.41□□□□□ -0.74
SF3A1-206ENST00000471037 MB21D2Q8IYB1 491 aaPredicted RBP10.41□□□□□ -0.74
SF3A1-206ENST00000471037 LMBR1Q8WVP7 490 aa10.41□□□□□ -0.74
SF3A1-206ENST00000471037 MTA3Q9BTC8 594 aa10.41□□□□□ -0.74
SF3A1-206ENST00000471037 IFIH1Q9BYX4 1025 aaKnown RBP10.41□□□□□ -0.74
SF3A1-206ENST00000471037 NSUN3Q9H649 340 aaKnown RBP10.41□□□□□ -0.74
SF3A1-206ENST00000471037 SENP2Q9HC62 589 aa10.41□□□□□ -0.74
SF3A1-206ENST00000471037 H3BQ06 376 aaPredicted RBP10.4□□□□□ -0.74
SF3A1-206ENST00000471037 PIK3CDO00329 1044 aa10.4□□□□□ -0.74
SF3A1-206ENST00000471037 UPP2O95045 317 aa10.4□□□□□ -0.74
SF3A1-206ENST00000471037 RB1P06400 928 aa10.4□□□□□ -0.74
SF3A1-206ENST00000471037 LINC00271P0C7V0 271 aa10.4□□□□□ -0.74
SF3A1-206ENST00000471037 ALADP13716 330 aa10.4□□□□□ -0.74
SF3A1-206ENST00000471037 SSTR3P32745 418 aaPredicted RBP10.4□□□□□ -0.74
SF3A1-206ENST00000471037 EXOSC10Q01780 885 aaKnown RBP10.4□□□□□ -0.74
SF3A1-206ENST00000471037 WTAPQ15007 396 aa10.4□□□□□ -0.74
SF3A1-206ENST00000471037 SART3Q15020 963 aaKnown RBP10.4□□□□□ -0.74
SF3A1-206ENST00000471037 ANKRD1Q15327 319 aa10.4□□□□□ -0.74
SF3A1-206ENST00000471037 TCEAL5Q5H9L2 206 aa10.4□□□□□ -0.74
SF3A1-206ENST00000471037 TAF2Q6P1X5 1199 aa10.4□□□□□ -0.74
SF3A1-206ENST00000471037 GIMAP8Q8ND71 665 aaPredicted RBP10.4□□□□□ -0.74
SF3A1-206ENST00000471037 SNX21Q969T3 373 aa10.4□□□□□ -0.74
SF3A1-206ENST00000471037 MAP3K14Q99558 947 aa10.4□□□□□ -0.74
SF3A1-206ENST00000471037 SPZ1Q9BXG8 430 aa10.4□□□□□ -0.74
SF3A1-206ENST00000471037 LMAN2LQ9H0V9 348 aa10.4□□□□□ -0.74
SF3A1-206ENST00000471037 EHMT1Q9H9B1 1298 aa10.4□□□□□ -0.74
SF3A1-206ENST00000471037 RC3H2Q9HBD1 1191 aaKnown RBP10.4□□□□□ -0.74
SF3A1-206ENST00000471037 PDRG1Q9NUG6 133 aa10.4□□□□□ -0.74
SF3A1-206ENST00000471037 PRKAG3Q9UGI9 489 aa10.4□□□□□ -0.74
SF3A1-206ENST00000471037 FAM50BQ9Y247 325 aa10.4□□□□□ -0.74
SF3A1-206ENST00000471037 RWDD3Q9Y3V2 267 aa10.4□□□□□ -0.74
SF3A1-206ENST00000471037 NLRC5Q86WI3 1866 aa10.4□□□□□ -0.75
SF3A1-206ENST00000471037 ADGRA3Q8IWK6 1321 aa10.39□□□□□ -0.75
SF3A1-206ENST00000471037 MEIS2O14770 477 aa10.39□□□□□ -0.75
SF3A1-206ENST00000471037 NCK2O43639 380 aa10.39□□□□□ -0.75
SF3A1-206ENST00000471037 PRC1O43663 620 aa10.39□□□□□ -0.75
SF3A1-206ENST00000471037 CHRNA1P02708 482 aa10.39□□□□□ -0.75
SF3A1-206ENST00000471037 SMARCA1P28370 1054 aa10.39□□□□□ -0.75
SF3A1-206ENST00000471037 ANTXR2P58335 489 aa10.39□□□□□ -0.75
SF3A1-206ENST00000471037 ARHGAP4P98171 946 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms