RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 NAPAP54920 295 aa18.68■□□□□ 0.58
COL9A3-208ENST00000469802 SP4Q02446 784 aa18.68■□□□□ 0.58
COL9A3-208ENST00000469802 FBXL16Q8N461 479 aa18.68■□□□□ 0.58
COL9A3-208ENST00000469802 SETD4Q9NVD3 440 aa18.68■□□□□ 0.58
COL9A3-208ENST00000469802 BARHL2Q9NY43 387 aa18.68■□□□□ 0.58
COL9A3-208ENST00000469802 SNX14Q9Y5W7 946 aa18.68■□□□□ 0.58
COL9A3-208ENST00000469802 V9GY48 417 aaPredicted RBP18.68■□□□□ 0.58
COL9A3-208ENST00000469802 GSTTP1A0A1W2PQM5 241 aa18.67■□□□□ 0.58
COL9A3-208ENST00000469802 KIF28PB7ZC32 967 aa18.67■□□□□ 0.58
COL9A3-208ENST00000469802 GNAT1P11488 350 aa18.67■□□□□ 0.58
COL9A3-208ENST00000469802 CPA1P15085 419 aa18.67■□□□□ 0.58
COL9A3-208ENST00000469802 CLK2P49760 499 aaKnown RBP18.67■□□□□ 0.58
COL9A3-208ENST00000469802 ADCY7P51828 1080 aa18.67■□□□□ 0.58
COL9A3-208ENST00000469802 UTP14CQ5TAP6 766 aaKnown RBP18.67■□□□□ 0.58
COL9A3-208ENST00000469802 TMCO2Q7Z6W1 182 aaPredicted RBP18.67■□□□□ 0.58
COL9A3-208ENST00000469802 JAKMIP1Q96N16 626 aaKnown RBP18.67■□□□□ 0.58
COL9A3-208ENST00000469802 ANO3Q9BYT9 981 aa18.67■□□□□ 0.58
COL9A3-208ENST00000469802 AGXT2Q9BYV1 514 aa18.67■□□□□ 0.58
COL9A3-208ENST00000469802 EHMT1Q9H9B1 1298 aa18.67■□□□□ 0.58
COL9A3-208ENST00000469802 PRDM6Q9NQX0 595 aa18.67■□□□□ 0.58
COL9A3-208ENST00000469802 TTC28Q96AY4 2481 aa18.67■□□□□ 0.58
COL9A3-208ENST00000469802 RALGAPA2Q2PPJ7 1873 aa18.67■□□□□ 0.58
COL9A3-208ENST00000469802 LCHNA4D1U4 455 aa18.66■□□□□ 0.58
COL9A3-208ENST00000469802 EPOPA6NHQ4 379 aa18.66■□□□□ 0.58
COL9A3-208ENST00000469802 TLL1O43897 1013 aa18.66■□□□□ 0.58
COL9A3-208ENST00000469802 GJB5O95377 273 aa18.66■□□□□ 0.58
COL9A3-208ENST00000469802 POU3F3P20264 500 aaPredicted RBP18.66■□□□□ 0.58
COL9A3-208ENST00000469802 AP3B2Q13367 1082 aa18.66■□□□□ 0.58
COL9A3-208ENST00000469802 IKBKEQ14164 716 aa18.66■□□□□ 0.58
COL9A3-208ENST00000469802 PLEKHG4Q58EX7 1191 aa18.66■□□□□ 0.58
COL9A3-208ENST00000469802 MXRA8Q9BRK3 442 aa18.66■□□□□ 0.58
COL9A3-208ENST00000469802 KCNH7Q9NS40 1196 aa18.66■□□□□ 0.58
COL9A3-208ENST00000469802 NRCAMQ92823 1304 aa18.66■□□□□ 0.58
COL9A3-208ENST00000469802 FOSP01100 380 aaPredicted RBP18.65■□□□□ 0.58
COL9A3-208ENST00000469802 IGFBP4P22692 258 aa18.65■□□□□ 0.58
COL9A3-208ENST00000469802 SREBF1P36956 1147 aa18.65■□□□□ 0.58
COL9A3-208ENST00000469802 METAP2P50579 478 aaKnown RBP eCLIP18.65■□□□□ 0.58
COL9A3-208ENST00000469802 APOBRQ0VD83 1088 aa18.65■□□□□ 0.58
COL9A3-208ENST00000469802 PFKFB3Q16875 520 aaPredicted RBP18.65■□□□□ 0.58
COL9A3-208ENST00000469802 BLOC1S2Q6QNY1 142 aa18.65■□□□□ 0.58
COL9A3-208ENST00000469802 Q6ZUG5 572 aa18.65■□□□□ 0.58
COL9A3-208ENST00000469802 SPRED2Q7Z698 418 aa18.65■□□□□ 0.58
COL9A3-208ENST00000469802 DBF4BQ8NFT6 615 aa18.65■□□□□ 0.58
COL9A3-208ENST00000469802 CYP2W1Q8TAV3 490 aa18.65■□□□□ 0.58
COL9A3-208ENST00000469802 SEPT1Q8WYJ6 367 aa18.65■□□□□ 0.58
COL9A3-208ENST00000469802 BRF1Q92994 677 aa18.65■□□□□ 0.58
COL9A3-208ENST00000469802 PGBD1Q96JS3 809 aa18.65■□□□□ 0.58
COL9A3-208ENST00000469802 OSBPL7Q9BZF2 842 aa18.65■□□□□ 0.58
COL9A3-208ENST00000469802 GLT8D2Q9H1C3 349 aa18.65■□□□□ 0.58
COL9A3-208ENST00000469802 JPH1Q9HDC5 661 aaPredicted RBP18.65■□□□□ 0.58
COL9A3-208ENST00000469802 ERAP1Q9NZ08 941 aa18.65■□□□□ 0.58
COL9A3-208ENST00000469802 PKD2L1Q9P0L9 805 aa18.65■□□□□ 0.58
COL9A3-208ENST00000469802 MYH9P35579 1960 aaKnown RBP18.64■□□□□ 0.58
COL9A3-208ENST00000469802 CCDC196A0A1B0GTZ2 297 aa18.64■□□□□ 0.57
COL9A3-208ENST00000469802 ESYT2A0FGR8 921 aa18.64■□□□□ 0.57
COL9A3-208ENST00000469802 SMCO2A6NFE2 343 aa18.64■□□□□ 0.57
COL9A3-208ENST00000469802 REC8O95072 547 aa18.64■□□□□ 0.57
COL9A3-208ENST00000469802 RPS6KB1P23443 525 aa18.64■□□□□ 0.57
COL9A3-208ENST00000469802 ADD1P35611 737 aaKnown RBP18.64■□□□□ 0.57
COL9A3-208ENST00000469802 ARHGAP4P98171 946 aa18.64■□□□□ 0.57
COL9A3-208ENST00000469802 CEP55Q53EZ4 464 aa18.64■□□□□ 0.57
COL9A3-208ENST00000469802 FAM26DQ5JW98 314 aa18.64■□□□□ 0.57
COL9A3-208ENST00000469802 RPAINQ86UA6 219 aa18.64■□□□□ 0.57
COL9A3-208ENST00000469802 CRYGNQ8WXF5 182 aa18.64■□□□□ 0.57
COL9A3-208ENST00000469802 PCYT2Q99447 389 aa18.64■□□□□ 0.57
COL9A3-208ENST00000469802 CERS4Q9HA82 394 aa18.64■□□□□ 0.57
COL9A3-208ENST00000469802 NFASCO94856 1347 aa18.64■□□□□ 0.57
COL9A3-208ENST00000469802 MBLAC1A4D2B0 266 aaPredicted RBP18.63■□□□□ 0.57
COL9A3-208ENST00000469802 RFXAPO00287 272 aa18.63■□□□□ 0.57
COL9A3-208ENST00000469802 EPB41L2O43491 1005 aaKnown RBP18.63■□□□□ 0.57
COL9A3-208ENST00000469802 CTSHP09668 335 aa18.63■□□□□ 0.57
COL9A3-208ENST00000469802 SCG2P13521 617 aa18.63■□□□□ 0.57
COL9A3-208ENST00000469802 FGD1P98174 961 aa18.63■□□□□ 0.57
COL9A3-208ENST00000469802 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.63■□□□□ 0.57
COL9A3-208ENST00000469802 PPM1EQ8WY54 764 aa18.63■□□□□ 0.57
COL9A3-208ENST00000469802 RAD9AQ99638 391 aa18.63■□□□□ 0.57
COL9A3-208ENST00000469802 TMEM260Q9NX78 707 aa18.63■□□□□ 0.57
COL9A3-208ENST00000469802 THEGQ9P2T0 379 aa18.63■□□□□ 0.57
COL9A3-208ENST00000469802 SLC9A2Q9UBY0 812 aa18.63■□□□□ 0.57
COL9A3-208ENST00000469802 MTCH2Q9Y6C9 303 aa18.63■□□□□ 0.57
COL9A3-208ENST00000469802 ATG2AQ2TAZ0 1938 aa18.62■□□□□ 0.57
COL9A3-208ENST00000469802 MEIS1O00470 390 aa18.62■□□□□ 0.57
COL9A3-208ENST00000469802 LPXNO60711 386 aa18.62■□□□□ 0.57
COL9A3-208ENST00000469802 ARP10275 920 aa18.62■□□□□ 0.57
COL9A3-208ENST00000469802 EVCP57679 992 aa18.62■□□□□ 0.57
COL9A3-208ENST00000469802 PPFIA1Q13136 1202 aa18.62■□□□□ 0.57
COL9A3-208ENST00000469802 ITGB3BPQ13352 177 aaPredicted RBP18.62■□□□□ 0.57
COL9A3-208ENST00000469802 CCDC85BQ15834 202 aaPredicted RBP18.62■□□□□ 0.57
COL9A3-208ENST00000469802 GRIK4Q16099 956 aa18.62■□□□□ 0.57
COL9A3-208ENST00000469802 PKN1Q16512 942 aa18.62■□□□□ 0.57
COL9A3-208ENST00000469802 TJAP1Q5JTD0 557 aa18.62■□□□□ 0.57
COL9A3-208ENST00000469802 TAF2Q6P1X5 1199 aa18.62■□□□□ 0.57
COL9A3-208ENST00000469802 RUFY4Q6ZNE9 571 aa18.62■□□□□ 0.57
COL9A3-208ENST00000469802 NIPA1Q7RTP0 329 aa18.62■□□□□ 0.57
COL9A3-208ENST00000469802 ATXN2LQ8WWM7 1075 aaKnown RBP18.62■□□□□ 0.57
COL9A3-208ENST00000469802 ARNTL2Q8WYA1 636 aa18.62■□□□□ 0.57
COL9A3-208ENST00000469802 ZMYND12Q9H0C1 365 aa18.62■□□□□ 0.57
COL9A3-208ENST00000469802 SMARCAD1Q9H4L7 1026 aa18.62■□□□□ 0.57
COL9A3-208ENST00000469802 AGO4Q9HCK5 861 aaKnown RBP18.62■□□□□ 0.57
COL9A3-208ENST00000469802 LINC01553A4QN01 128 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms