RNA–Protein interactions for RNA: ENST00000469757.1

TRAPPC3-206, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 221 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-206ENST00000469757 MFSD10Q14728 455 aa9.41□□□□□ -0.9
TRAPPC3-206ENST00000469757 INF2Q27J81 1249 aa9.41□□□□□ -0.9
TRAPPC3-206ENST00000469757 NBPF20Q3BBV1 942 aa9.41□□□□□ -0.9
TRAPPC3-206ENST00000469757 PIK3AP1Q6ZUJ8 805 aa9.41□□□□□ -0.9
TRAPPC3-206ENST00000469757 TRIM50Q86XT4 487 aa9.41□□□□□ -0.9
TRAPPC3-206ENST00000469757 SMAP1Q8IYB5 467 aaPredicted RBP9.41□□□□□ -0.9
TRAPPC3-206ENST00000469757 AFAP1L1Q8TED9 768 aa9.41□□□□□ -0.9
TRAPPC3-206ENST00000469757 TRIM43Q96BQ3 446 aaPredicted RBP9.41□□□□□ -0.9
TRAPPC3-206ENST00000469757 INTS4Q96HW7 963 aaKnown RBP9.41□□□□□ -0.9
TRAPPC3-206ENST00000469757 GDF15Q99988 308 aa9.41□□□□□ -0.9
TRAPPC3-206ENST00000469757 ZNF577Q9BSK1 485 aa9.41□□□□□ -0.9
TRAPPC3-206ENST00000469757 GTF2IRD1Q9UHL9 959 aa9.41□□□□□ -0.9
TRAPPC3-206ENST00000469757 WDR81Q562E7 1941 aa9.41□□□□□ -0.9
TRAPPC3-206ENST00000469757 A0A1W2PPC1 479 aa9.4□□□□□ -0.9
TRAPPC3-206ENST00000469757 H3BRB1 525 aa9.4□□□□□ -0.9
TRAPPC3-206ENST00000469757 K7ELQ4 463 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC3-206ENST00000469757 PITPNM1O00562 1244 aa9.4□□□□□ -0.9
TRAPPC3-206ENST00000469757 TLR3O15455 904 aaKnown RBP9.4□□□□□ -0.9
TRAPPC3-206ENST00000469757 PSMD10O75832 226 aa9.4□□□□□ -0.9
TRAPPC3-206ENST00000469757 SUPT20HL2P0C7V6 817 aa9.4□□□□□ -0.9
TRAPPC3-206ENST00000469757 BMP8BP34820 402 aa9.4□□□□□ -0.9
TRAPPC3-206ENST00000469757 ZNF76P36508 570 aa9.4□□□□□ -0.9
TRAPPC3-206ENST00000469757 SLC26A2P50443 739 aa9.4□□□□□ -0.9
TRAPPC3-206ENST00000469757 ADAM17P78536 824 aa9.4□□□□□ -0.9
TRAPPC3-206ENST00000469757 SAFBQ15424 915 aaKnown RBP eCLIP9.4□□□□□ -0.9
TRAPPC3-206ENST00000469757 KIAA0753Q2KHM9 967 aa9.4□□□□□ -0.9
TRAPPC3-206ENST00000469757 NOSTRINQ8IVI9 506 aa9.4□□□□□ -0.9
TRAPPC3-206ENST00000469757 FAM184AQ8NB25 1140 aa9.4□□□□□ -0.9
TRAPPC3-206ENST00000469757 RDM1Q8NG50 284 aa9.4□□□□□ -0.9
TRAPPC3-206ENST00000469757 SEPT1Q8WYJ6 367 aa9.4□□□□□ -0.9
TRAPPC3-206ENST00000469757 PCYT2Q99447 389 aa9.4□□□□□ -0.9
TRAPPC3-206ENST00000469757 NOC4LQ9BVI4 516 aaKnown RBP9.4□□□□□ -0.9
TRAPPC3-206ENST00000469757 TUT1Q9H6E5 874 aaKnown RBP9.4□□□□□ -0.9
TRAPPC3-206ENST00000469757 ERAP1Q9NZ08 941 aa9.4□□□□□ -0.9
TRAPPC3-206ENST00000469757 PKD2L1Q9P0L9 805 aa9.4□□□□□ -0.9
TRAPPC3-206ENST00000469757 DDX25Q9UHL0 483 aaKnown RBP9.4□□□□□ -0.9
TRAPPC3-206ENST00000469757 VAV3Q9UKW4 847 aa9.4□□□□□ -0.9
TRAPPC3-206ENST00000469757 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC3-206ENST00000469757 SIP14410 1827 aa9.4□□□□□ -0.91
TRAPPC3-206ENST00000469757 WDR64B1ANS9 1081 aa9.39□□□□□ -0.91
TRAPPC3-206ENST00000469757 KIF28PB7ZC32 967 aa9.39□□□□□ -0.91
TRAPPC3-206ENST00000469757 WNT7AO00755 349 aa9.39□□□□□ -0.91
TRAPPC3-206ENST00000469757 ITGB8P26012 769 aa9.39□□□□□ -0.91
TRAPPC3-206ENST00000469757 GJB2P29033 226 aa9.39□□□□□ -0.91
TRAPPC3-206ENST00000469757 SFNP31947 248 aa9.39□□□□□ -0.91
TRAPPC3-206ENST00000469757 MAGEA10P43363 369 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC3-206ENST00000469757 TRAPPC10P48553 1259 aa9.39□□□□□ -0.91
TRAPPC3-206ENST00000469757 JAK3P52333 1124 aa9.39□□□□□ -0.91
TRAPPC3-206ENST00000469757 SPIRE1Q08AE8 756 aa9.39□□□□□ -0.91
TRAPPC3-206ENST00000469757 PPP2R5CQ13362 524 aa9.39□□□□□ -0.91
TRAPPC3-206ENST00000469757 LRCH2Q5VUJ6 765 aa9.39□□□□□ -0.91
TRAPPC3-206ENST00000469757 GDF6Q6KF10 455 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC3-206ENST00000469757 ABHD15Q6UXT9 468 aa9.39□□□□□ -0.91
TRAPPC3-206ENST00000469757 PLPPR4Q7Z2D5 763 aa9.39□□□□□ -0.91
TRAPPC3-206ENST00000469757 SH3RF1Q7Z6J0 888 aa9.39□□□□□ -0.91
TRAPPC3-206ENST00000469757 SERINC5Q86VE9 423 aa9.39□□□□□ -0.91
TRAPPC3-206ENST00000469757 CCDC60Q8IWA6 550 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC3-206ENST00000469757 FAM20AQ96MK3 541 aa9.39□□□□□ -0.91
TRAPPC3-206ENST00000469757 TRPV6Q9H1D0 765 aa9.39□□□□□ -0.91
TRAPPC3-206ENST00000469757 TRMT13Q9NUP7 481 aaKnown RBP9.39□□□□□ -0.91
TRAPPC3-206ENST00000469757 HDAC6Q9UBN7 1215 aa9.39□□□□□ -0.91
TRAPPC3-206ENST00000469757 ZMYND8Q9ULU4 1186 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC3-206ENST00000469757 COL1A2P08123 1366 aa9.38□□□□□ -0.91
TRAPPC3-206ENST00000469757 LAMA3Q16787 3333 aa9.38□□□□□ -0.91
TRAPPC3-206ENST00000469757 ARID2Q68CP9 1835 aa9.38□□□□□ -0.91
TRAPPC3-206ENST00000469757 NRCAMQ92823 1304 aa9.38□□□□□ -0.91
TRAPPC3-206ENST00000469757 MBLAC1A4D2B0 266 aaPredicted RBP9.38□□□□□ -0.91
TRAPPC3-206ENST00000469757 SORBS3O60504 671 aa9.38□□□□□ -0.91
TRAPPC3-206ENST00000469757 GAS7O60861 476 aa9.38□□□□□ -0.91
TRAPPC3-206ENST00000469757 CAND2O75155 1236 aa9.38□□□□□ -0.91
TRAPPC3-206ENST00000469757 TIMP1P01033 207 aa9.38□□□□□ -0.91
TRAPPC3-206ENST00000469757 SMIM10L2AP0DMW4 78 aa9.38□□□□□ -0.91
TRAPPC3-206ENST00000469757 SMIM10L2BP0DMW5 78 aa9.38□□□□□ -0.91
TRAPPC3-206ENST00000469757 SYN1P17600 705 aa9.38□□□□□ -0.91
TRAPPC3-206ENST00000469757 SP4Q02446 784 aa9.38□□□□□ -0.91
TRAPPC3-206ENST00000469757 HIC1Q14526 733 aa9.38□□□□□ -0.91
TRAPPC3-206ENST00000469757 TRIM71Q2Q1W2 868 aaKnown RBP9.38□□□□□ -0.91
TRAPPC3-206ENST00000469757 LETM2Q2VYF4 491 aa9.38□□□□□ -0.91
TRAPPC3-206ENST00000469757 POTEDQ86YR6 584 aa9.38□□□□□ -0.91
TRAPPC3-206ENST00000469757 C7orf31Q8N865 590 aa9.38□□□□□ -0.91
TRAPPC3-206ENST00000469757 CAGE1Q8TC20 777 aa9.38□□□□□ -0.91
TRAPPC3-206ENST00000469757 LMBR1Q8WVP7 490 aa9.38□□□□□ -0.91
TRAPPC3-206ENST00000469757 DHX38Q92620 1227 aaKnown RBP9.38□□□□□ -0.91
TRAPPC3-206ENST00000469757 HAS1Q92839 578 aa9.38□□□□□ -0.91
TRAPPC3-206ENST00000469757 VTI1AQ96AJ9 217 aa9.38□□□□□ -0.91
TRAPPC3-206ENST00000469757 TEKT3Q9BXF9 490 aa9.38□□□□□ -0.91
TRAPPC3-206ENST00000469757 WNT8AQ9H1J5 351 aa9.38□□□□□ -0.91
TRAPPC3-206ENST00000469757 HIPK3Q9H422 1215 aa9.38□□□□□ -0.91
TRAPPC3-206ENST00000469757 SMARCAD1Q9H4L7 1026 aa9.38□□□□□ -0.91
TRAPPC3-206ENST00000469757 PRDM5Q9NQX1 630 aaPredicted RBP9.38□□□□□ -0.91
TRAPPC3-206ENST00000469757 TMEM39AQ9NV64 488 aa9.38□□□□□ -0.91
TRAPPC3-206ENST00000469757 PRKAG2Q9UGJ0 569 aa9.38□□□□□ -0.91
TRAPPC3-206ENST00000469757 TCEAL9Q9UHQ7 104 aa9.38□□□□□ -0.91
TRAPPC3-206ENST00000469757 SMC3Q9UQE7 1217 aa9.38□□□□□ -0.91
TRAPPC3-206ENST00000469757 NEMFO60524 1076 aa9.37□□□□□ -0.91
TRAPPC3-206ENST00000469757 CCNT1O60563 726 aaKnown RBP9.37□□□□□ -0.91
TRAPPC3-206ENST00000469757 PDCP20941 246 aa9.37□□□□□ -0.91
TRAPPC3-206ENST00000469757 FOSBP53539 338 aa9.37□□□□□ -0.91
TRAPPC3-206ENST00000469757 GUCY1B3Q02153 619 aa9.37□□□□□ -0.91
TRAPPC3-206ENST00000469757 PTK7Q13308 1070 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms