RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 NPLOC4Q8TAT6 608 aa9.2□□□□□ -0.94
NPHP3-204ENST00000469232 SYMPKQ92797 1274 aaKnown RBP9.2□□□□□ -0.94
NPHP3-204ENST00000469232 EPSTI1Q96J88 318 aa9.2□□□□□ -0.94
NPHP3-204ENST00000469232 KCNK17Q96T54 332 aa9.2□□□□□ -0.94
NPHP3-204ENST00000469232 MPHOSPH6Q99547 160 aaKnown RBP9.2□□□□□ -0.94
NPHP3-204ENST00000469232 HSD17B14Q9BPX1 270 aa9.2□□□□□ -0.94
NPHP3-204ENST00000469232 PYM1Q9BRP8 204 aaKnown RBP9.2□□□□□ -0.94
NPHP3-204ENST00000469232 RAB34Q9BZG1 259 aa9.2□□□□□ -0.94
NPHP3-204ENST00000469232 VTA1Q9NP79 307 aa9.2□□□□□ -0.94
NPHP3-204ENST00000469232 NRBP1Q9UHY1 535 aa9.2□□□□□ -0.94
NPHP3-204ENST00000469232 KCNH3Q9ULD8 1083 aa9.2□□□□□ -0.94
NPHP3-204ENST00000469232 DDX49Q9Y6V7 483 aaKnown RBP9.2□□□□□ -0.94
NPHP3-204ENST00000469232 CASP8AP2Q9UKL3 1982 aa9.19□□□□□ -0.94
NPHP3-204ENST00000469232 A0A087X0B3 334 aa9.19□□□□□ -0.94
NPHP3-204ENST00000469232 GOLGA6L4A6NEF3 574 aa9.19□□□□□ -0.94
NPHP3-204ENST00000469232 ACTN4O43707 911 aaKnown RBP9.19□□□□□ -0.94
NPHP3-204ENST00000469232 ATP9AO75110 1047 aa9.19□□□□□ -0.94
NPHP3-204ENST00000469232 NR1I2O75469 434 aa9.19□□□□□ -0.94
NPHP3-204ENST00000469232 SNAI1O95863 264 aaPredicted RBP9.19□□□□□ -0.94
NPHP3-204ENST00000469232 TXKP42681 527 aa9.19□□□□□ -0.94
NPHP3-204ENST00000469232 HTRA3P83110 453 aa9.19□□□□□ -0.94
NPHP3-204ENST00000469232 CAP1Q01518 475 aa9.19□□□□□ -0.94
NPHP3-204ENST00000469232 SP3Q02447 781 aa9.19□□□□□ -0.94
NPHP3-204ENST00000469232 TMEM266Q2M3C6 531 aa9.19□□□□□ -0.94
NPHP3-204ENST00000469232 GNPTABQ3T906 1256 aa9.19□□□□□ -0.94
NPHP3-204ENST00000469232 TMEM119Q4V9L6 283 aa9.19□□□□□ -0.94
NPHP3-204ENST00000469232 NAALADL2Q58DX5 795 aa9.19□□□□□ -0.94
NPHP3-204ENST00000469232 TAPT1Q6NXT6 567 aa9.19□□□□□ -0.94
NPHP3-204ENST00000469232 LRRC15Q8TF66 581 aa9.19□□□□□ -0.94
NPHP3-204ENST00000469232 TRIM47Q96LD4 638 aa9.19□□□□□ -0.94
NPHP3-204ENST00000469232 TINF2Q9BSI4 451 aa9.19□□□□□ -0.94
NPHP3-204ENST00000469232 ZNF577Q9BSK1 485 aa9.19□□□□□ -0.94
NPHP3-204ENST00000469232 POLR3CQ9BUI4 534 aaPredicted RBP9.19□□□□□ -0.94
NPHP3-204ENST00000469232 SLC5A4Q9NY91 659 aa9.19□□□□□ -0.94
NPHP3-204ENST00000469232 TMEM63CQ9P1W3 806 aa9.19□□□□□ -0.94
NPHP3-204ENST00000469232 A0A1B0GVL5 298 aa9.18□□□□□ -0.94
NPHP3-204ENST00000469232 ZNF202O95125 648 aa9.18□□□□□ -0.94
NPHP3-204ENST00000469232 ATG7O95352 703 aa9.18□□□□□ -0.94
NPHP3-204ENST00000469232 LYPLA2O95372 231 aa9.18□□□□□ -0.94
NPHP3-204ENST00000469232 GNRH1P01148 92 aa9.18□□□□□ -0.94
NPHP3-204ENST00000469232 SPATA31C1P0DKV0 1188 aa9.18□□□□□ -0.94
NPHP3-204ENST00000469232 MYCLP12524 364 aaPredicted RBP9.18□□□□□ -0.94
NPHP3-204ENST00000469232 RPA1P27694 616 aa9.18□□□□□ -0.94
NPHP3-204ENST00000469232 TECP42680 631 aa9.18□□□□□ -0.94
NPHP3-204ENST00000469232 FCGRTP55899 365 aa9.18□□□□□ -0.94
NPHP3-204ENST00000469232 MDM2Q00987 491 aaPredicted RBP9.18□□□□□ -0.94
NPHP3-204ENST00000469232 SP2Q02086 613 aa9.18□□□□□ -0.94
NPHP3-204ENST00000469232 PDE4DQ08499 809 aa9.18□□□□□ -0.94
NPHP3-204ENST00000469232 GRB10Q13322 594 aa9.18□□□□□ -0.94
NPHP3-204ENST00000469232 EPHA7Q15375 998 aa9.18□□□□□ -0.94
NPHP3-204ENST00000469232 LRCH2Q5VUJ6 765 aa9.18□□□□□ -0.94
NPHP3-204ENST00000469232 ZNF746Q6NUN9 644 aaPredicted RBP9.18□□□□□ -0.94
NPHP3-204ENST00000469232 PDXDC2PQ6P474 469 aa9.18□□□□□ -0.94
NPHP3-204ENST00000469232 CNNM4Q6P4Q7 775 aa9.18□□□□□ -0.94
NPHP3-204ENST00000469232 ADGRD1Q6QNK2 874 aa9.18□□□□□ -0.94
NPHP3-204ENST00000469232 CCDC73Q6ZRK6 1079 aa9.18□□□□□ -0.94
NPHP3-204ENST00000469232 ARMCX2Q7L311 632 aa9.18□□□□□ -0.94
NPHP3-204ENST00000469232 NEK9Q8TD19 979 aa9.18□□□□□ -0.94
NPHP3-204ENST00000469232 RNF166Q96A37 237 aaPredicted RBP9.18□□□□□ -0.94
NPHP3-204ENST00000469232 EMID1Q96A84 441 aaPredicted RBP9.18□□□□□ -0.94
NPHP3-204ENST00000469232 PNMA5Q96PV4 448 aa9.18□□□□□ -0.94
NPHP3-204ENST00000469232 APBA2Q99767 749 aa9.18□□□□□ -0.94
NPHP3-204ENST00000469232 NUDT12Q9BQG2 462 aa9.18□□□□□ -0.94
NPHP3-204ENST00000469232 CUEDC2Q9H467 287 aa9.18□□□□□ -0.94
NPHP3-204ENST00000469232 CLSTN2Q9H4D0 955 aa9.18□□□□□ -0.94
NPHP3-204ENST00000469232 WDR70Q9NW82 654 aa9.18□□□□□ -0.94
NPHP3-204ENST00000469232 DACT1Q9NYF0 836 aa9.18□□□□□ -0.94
NPHP3-204ENST00000469232 FAM13BQ9NYF5 915 aa9.18□□□□□ -0.94
NPHP3-204ENST00000469232 LRWD1Q9UFC0 647 aa9.18□□□□□ -0.94
NPHP3-204ENST00000469232 DDX41Q9UJV9 622 aaKnown RBP9.18□□□□□ -0.94
NPHP3-204ENST00000469232 MCM3APO60318 1980 aa9.17□□□□□ -0.94
NPHP3-204ENST00000469232 IGKV6D-21A0A0A0MT36 114 aa9.17□□□□□ -0.94
NPHP3-204ENST00000469232 PP2D1A8MPX8 630 aa9.17□□□□□ -0.94
NPHP3-204ENST00000469232 GPR25O00155 361 aa9.17□□□□□ -0.94
NPHP3-204ENST00000469232 EML1O00423 815 aa9.17□□□□□ -0.94
NPHP3-204ENST00000469232 GAS7O60861 476 aa9.17□□□□□ -0.94
NPHP3-204ENST00000469232 CCNE2O96020 404 aa9.17□□□□□ -0.94
NPHP3-204ENST00000469232 SLFN14P0C7P3 912 aa9.17□□□□□ -0.94
NPHP3-204ENST00000469232 HOXD8P13378 290 aaPredicted RBP9.17□□□□□ -0.94
NPHP3-204ENST00000469232 SFNP31947 248 aa9.17□□□□□ -0.94
NPHP3-204ENST00000469232 RGS2P41220 211 aa9.17□□□□□ -0.94
NPHP3-204ENST00000469232 UBA7P41226 1012 aa9.17□□□□□ -0.94
NPHP3-204ENST00000469232 SYKP43405 635 aa9.17□□□□□ -0.94
NPHP3-204ENST00000469232 PSMC4P43686 418 aa9.17□□□□□ -0.94
NPHP3-204ENST00000469232 KRT76Q01546 638 aa9.17□□□□□ -0.94
NPHP3-204ENST00000469232 SPECC1Q5M775 1068 aa9.17□□□□□ -0.94
NPHP3-204ENST00000469232 KRBA2Q6ZNG9 492 aa9.17□□□□□ -0.94
NPHP3-204ENST00000469232 CABP7Q86V35 215 aa9.17□□□□□ -0.94
NPHP3-204ENST00000469232 GIMAP8Q8ND71 665 aaPredicted RBP9.17□□□□□ -0.94
NPHP3-204ENST00000469232 SPATA20Q8TB22 786 aa9.17□□□□□ -0.94
NPHP3-204ENST00000469232 GJA10Q969M2 543 aa9.17□□□□□ -0.94
NPHP3-204ENST00000469232 ZDHHC16Q969W1 377 aa9.17□□□□□ -0.94
NPHP3-204ENST00000469232 TEKT3Q9BXF9 490 aa9.17□□□□□ -0.94
NPHP3-204ENST00000469232 UNC45AQ9H3U1 944 aa9.17□□□□□ -0.94
NPHP3-204ENST00000469232 ABHD16BQ9H3Z7 469 aa9.17□□□□□ -0.94
NPHP3-204ENST00000469232 MAGEF1Q9HAY2 307 aa9.17□□□□□ -0.94
NPHP3-204ENST00000469232 TUFT1Q9NNX1 390 aa9.17□□□□□ -0.94
NPHP3-204ENST00000469232 DISC1Q9NRI5 854 aa9.17□□□□□ -0.94
NPHP3-204ENST00000469232 WBP1LQ9NX94 342 aa9.17□□□□□ -0.94
NPHP3-204ENST00000469232 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms