RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 PRC1O43663 620 aa14.13□□□□□ -0.15
HDAC3-204ENST00000469207 STAM2O75886 525 aa14.13□□□□□ -0.15
HDAC3-204ENST00000469207 GHRP10912 638 aa14.13□□□□□ -0.15
HDAC3-204ENST00000469207 TCF7P36402 384 aaPredicted RBP14.13□□□□□ -0.15
HDAC3-204ENST00000469207 UBE2SQ16763 222 aa14.13□□□□□ -0.15
HDAC3-204ENST00000469207 EP400NLQ6ZTU2 488 aa14.13□□□□□ -0.15
HDAC3-204ENST00000469207 TMEM192Q8IY95 271 aa14.13□□□□□ -0.15
HDAC3-204ENST00000469207 SPZ1Q9BXG8 430 aa14.13□□□□□ -0.15
HDAC3-204ENST00000469207 H3BNC9 293 aa14.12□□□□□ -0.15
HDAC3-204ENST00000469207 CSPG5O95196 566 aa14.12□□□□□ -0.15
HDAC3-204ENST00000469207 GNAT1P11488 350 aa14.12□□□□□ -0.15
HDAC3-204ENST00000469207 KCNA2P16389 499 aa14.12□□□□□ -0.15
HDAC3-204ENST00000469207 ITGB5P18084 799 aa14.12□□□□□ -0.15
HDAC3-204ENST00000469207 LEXMQ3ZCV2 418 aa14.12□□□□□ -0.15
HDAC3-204ENST00000469207 TCEAL5Q5H9L2 206 aa14.12□□□□□ -0.15
HDAC3-204ENST00000469207 FAM26DQ5JW98 314 aa14.12□□□□□ -0.15
HDAC3-204ENST00000469207 NFXL1Q6ZNB6 911 aa14.12□□□□□ -0.15
HDAC3-204ENST00000469207 FAM178BQ8IXR5 827 aa14.12□□□□□ -0.15
HDAC3-204ENST00000469207 CTCFLQ8NI51 663 aaPredicted RBP14.12□□□□□ -0.15
HDAC3-204ENST00000469207 CUL5Q93034 780 aa14.12□□□□□ -0.15
HDAC3-204ENST00000469207 MRPL38Q96DV4 380 aaKnown RBP14.12□□□□□ -0.15
HDAC3-204ENST00000469207 SENP7Q9BQF6 1050 aa14.12□□□□□ -0.15
HDAC3-204ENST00000469207 IFIH1Q9BYX4 1025 aaKnown RBP14.12□□□□□ -0.15
HDAC3-204ENST00000469207 PIK3CDO00329 1044 aa14.11□□□□□ -0.15
HDAC3-204ENST00000469207 SH2B2O14492 632 aaPredicted RBP14.11□□□□□ -0.15
HDAC3-204ENST00000469207 ENPP3O14638 875 aa14.11□□□□□ -0.15
HDAC3-204ENST00000469207 PLA2G5P39877 138 aa14.11□□□□□ -0.15
HDAC3-204ENST00000469207 IGBP1P78318 339 aa14.11□□□□□ -0.15
HDAC3-204ENST00000469207 TMEM31Q5JXX7 168 aa14.11□□□□□ -0.15
HDAC3-204ENST00000469207 MARCH8Q5T0T0 291 aa14.11□□□□□ -0.15
HDAC3-204ENST00000469207 PTCRAQ6ISU1 281 aaPredicted RBP14.11□□□□□ -0.15
HDAC3-204ENST00000469207 CASC1Q6TDU7 716 aa14.11□□□□□ -0.15
HDAC3-204ENST00000469207 NLRX1Q86UT6 975 aa14.11□□□□□ -0.15
HDAC3-204ENST00000469207 GJD3Q8N144 294 aa14.11□□□□□ -0.15
HDAC3-204ENST00000469207 BANK1Q8NDB2 785 aa14.11□□□□□ -0.15
HDAC3-204ENST00000469207 DNAJB3Q8WWF6 145 aa14.11□□□□□ -0.15
HDAC3-204ENST00000469207 FAM122AQ96E09 287 aa14.11□□□□□ -0.15
HDAC3-204ENST00000469207 MAP3K14Q99558 947 aa14.11□□□□□ -0.15
HDAC3-204ENST00000469207 LSG1Q9H089 658 aaKnown RBP14.11□□□□□ -0.15
HDAC3-204ENST00000469207 PSTPIP2Q9H939 334 aa14.11□□□□□ -0.15
HDAC3-204ENST00000469207 SEC63Q9UGP8 760 aaKnown RBP14.11□□□□□ -0.15
HDAC3-204ENST00000469207 ZNF215Q9UL58 517 aaPredicted RBP14.11□□□□□ -0.15
HDAC3-204ENST00000469207 GRXCR2A6NFK2 248 aa14.1□□□□□ -0.15
HDAC3-204ENST00000469207 CCDC69A6NI79 296 aa14.1□□□□□ -0.15
HDAC3-204ENST00000469207 PI4K2BG5E9Z4 385 aa14.1□□□□□ -0.15
HDAC3-204ENST00000469207 CAND2O75155 1236 aa14.1□□□□□ -0.15
HDAC3-204ENST00000469207 DDAH1O94760 285 aa14.1□□□□□ -0.15
HDAC3-204ENST00000469207 LINC00271P0C7V0 271 aa14.1□□□□□ -0.15
HDAC3-204ENST00000469207 KIF5BP33176 963 aa14.1□□□□□ -0.15
HDAC3-204ENST00000469207 MGAT3Q09327 533 aa14.1□□□□□ -0.15
HDAC3-204ENST00000469207 LPIN1Q14693 890 aa14.1□□□□□ -0.15
HDAC3-204ENST00000469207 SKAP1Q86WV1 359 aa14.1□□□□□ -0.15
HDAC3-204ENST00000469207 CYP2W1Q8TAV3 490 aa14.1□□□□□ -0.15
HDAC3-204ENST00000469207 NEK9Q8TD19 979 aa14.1□□□□□ -0.15
HDAC3-204ENST00000469207 SEPT1Q8WYJ6 367 aa14.1□□□□□ -0.15
HDAC3-204ENST00000469207 IL17RAQ96F46 866 aa14.1□□□□□ -0.15
HDAC3-204ENST00000469207 PGBD1Q96JS3 809 aa14.1□□□□□ -0.15
HDAC3-204ENST00000469207 PCYT2Q99447 389 aa14.1□□□□□ -0.15
HDAC3-204ENST00000469207 EHMT1Q9H9B1 1298 aa14.1□□□□□ -0.15
HDAC3-204ENST00000469207 PCDHA6Q9UN73 950 aa14.1□□□□□ -0.15
HDAC3-204ENST00000469207 PCDHA8Q9Y5H6 950 aa14.1□□□□□ -0.15
HDAC3-204ENST00000469207 NRCAMQ92823 1304 aa14.1□□□□□ -0.15
HDAC3-204ENST00000469207 MYO7AQ13402 2215 aa14.1□□□□□ -0.15
HDAC3-204ENST00000469207 SLC27A2O14975 620 aa14.09□□□□□ -0.15
HDAC3-204ENST00000469207 GRM6O15303 877 aa14.09□□□□□ -0.15
HDAC3-204ENST00000469207 GPR37L1O60883 481 aa14.09□□□□□ -0.15
HDAC3-204ENST00000469207 SMARCA1P28370 1054 aa14.09□□□□□ -0.15
HDAC3-204ENST00000469207 SSTR3P32745 418 aaPredicted RBP14.09□□□□□ -0.15
HDAC3-204ENST00000469207 MCM5P33992 734 aa14.09□□□□□ -0.15
HDAC3-204ENST00000469207 TMEM62Q0P6H9 643 aa14.09□□□□□ -0.15
HDAC3-204ENST00000469207 PPFIA1Q13136 1202 aa14.09□□□□□ -0.15
HDAC3-204ENST00000469207 GRIK4Q16099 956 aa14.09□□□□□ -0.15
HDAC3-204ENST00000469207 PTPROQ16827 1216 aa14.09□□□□□ -0.15
HDAC3-204ENST00000469207 RTN4RL1Q86UN2 441 aaPredicted RBP14.09□□□□□ -0.15
HDAC3-204ENST00000469207 FIBCD1Q8N539 461 aa14.09□□□□□ -0.15
HDAC3-204ENST00000469207 APBB2Q92870 758 aa14.09□□□□□ -0.15
HDAC3-204ENST00000469207 GLG1Q92896 1179 aa14.09□□□□□ -0.15
HDAC3-204ENST00000469207 GPRASP2Q96D09 838 aa14.09□□□□□ -0.15
HDAC3-204ENST00000469207 FAM49AQ9H0Q0 323 aaPredicted RBP14.09□□□□□ -0.15
HDAC3-204ENST00000469207 AGO3Q9H9G7 860 aaKnown RBP14.09□□□□□ -0.15
HDAC3-204ENST00000469207 UBIAD1Q9Y5Z9 338 aa14.09□□□□□ -0.15
HDAC3-204ENST00000469207 CDY2AQ9Y6F7 541 aa14.09□□□□□ -0.15
HDAC3-204ENST00000469207 INSRRP14616 1297 aa14.08□□□□□ -0.16
HDAC3-204ENST00000469207 CTNNB1P35222 781 aa14.08□□□□□ -0.16
HDAC3-204ENST00000469207 GTF2F1P35269 517 aaKnown RBP eCLIP14.08□□□□□ -0.16
HDAC3-204ENST00000469207 BMPR1AP36894 532 aa14.08□□□□□ -0.16
HDAC3-204ENST00000469207 LTBRP36941 435 aa14.08□□□□□ -0.16
HDAC3-204ENST00000469207 DLX2Q07687 328 aaPredicted RBP14.08□□□□□ -0.16
HDAC3-204ENST00000469207 MTMR1Q13613 665 aa14.08□□□□□ -0.16
HDAC3-204ENST00000469207 CLUL1Q15846 466 aa14.08□□□□□ -0.16
HDAC3-204ENST00000469207 TYW1BQ6NUM6 668 aa14.08□□□□□ -0.16
HDAC3-204ENST00000469207 XRRA1Q6P2D8 792 aa14.08□□□□□ -0.16
HDAC3-204ENST00000469207 FANCBQ8NB91 859 aa14.08□□□□□ -0.16
HDAC3-204ENST00000469207 TRAPPC12Q8WVT3 735 aa14.08□□□□□ -0.16
HDAC3-204ENST00000469207 LINC01599Q8WXQ3 324 aa14.08□□□□□ -0.16
HDAC3-204ENST00000469207 SAMD11Q96NU1 681 aa14.08□□□□□ -0.16
HDAC3-204ENST00000469207 LZTS2Q9BRK4 669 aa14.08□□□□□ -0.16
HDAC3-204ENST00000469207 CLDND1Q9NY35 253 aa14.08□□□□□ -0.16
HDAC3-204ENST00000469207 TUBE1Q9UJT0 475 aa14.08□□□□□ -0.16
HDAC3-204ENST00000469207 KAT6AQ92794 2004 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms