RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 PRRT2Q7Z6L0 340 aaPredicted RBP10.39□□□□□ -0.75
SMC1A-205ENST00000469129 MYOCDQ8IZQ8 938 aa10.39□□□□□ -0.75
SMC1A-205ENST00000469129 CSGALNACT2Q8N6G5 542 aa10.39□□□□□ -0.75
SMC1A-205ENST00000469129 SYT2Q8N9I0 419 aaPredicted RBP10.39□□□□□ -0.75
SMC1A-205ENST00000469129 KIAA0895Q8NCT3 520 aa10.39□□□□□ -0.75
SMC1A-205ENST00000469129 CYP2W1Q8TAV3 490 aa10.39□□□□□ -0.75
SMC1A-205ENST00000469129 CACTINQ8WUQ7 758 aaKnown RBP10.39□□□□□ -0.75
SMC1A-205ENST00000469129 GPRASP2Q96D09 838 aa10.39□□□□□ -0.75
SMC1A-205ENST00000469129 DNAJC19Q96DA6 116 aa10.39□□□□□ -0.75
SMC1A-205ENST00000469129 CDHR1Q96JP9 859 aa10.39□□□□□ -0.75
SMC1A-205ENST00000469129 ZNF830Q96NB3 372 aaPredicted RBP10.39□□□□□ -0.75
SMC1A-205ENST00000469129 RMDN3Q96TC7 470 aa10.39□□□□□ -0.75
SMC1A-205ENST00000469129 PDCD2LQ9BRP1 358 aa10.39□□□□□ -0.75
SMC1A-205ENST00000469129 JADE2Q9NQC1 790 aa10.39□□□□□ -0.75
SMC1A-205ENST00000469129 COL20A1Q9P218 1284 aa10.39□□□□□ -0.75
SMC1A-205ENST00000469129 ADD3Q9UEY8 706 aaKnown RBP10.39□□□□□ -0.75
SMC1A-205ENST00000469129 FZD1Q9UP38 647 aa10.39□□□□□ -0.75
SMC1A-205ENST00000469129 UBE4BO95155 1302 aa10.38□□□□□ -0.75
SMC1A-205ENST00000469129 FRMD3A2A2Y4 597 aa10.38□□□□□ -0.75
SMC1A-205ENST00000469129 TRIM49BA6NDI0 452 aa10.38□□□□□ -0.75
SMC1A-205ENST00000469129 N4BP3O15049 544 aa10.38□□□□□ -0.75
SMC1A-205ENST00000469129 MAFGO15525 162 aa10.38□□□□□ -0.75
SMC1A-205ENST00000469129 CHMP2AO43633 222 aa10.38□□□□□ -0.75
SMC1A-205ENST00000469129 ARP10275 920 aa10.38□□□□□ -0.75
SMC1A-205ENST00000469129 FCER1AP12319 257 aa10.38□□□□□ -0.75
SMC1A-205ENST00000469129 EIF2AK2P19525 551 aaKnown RBP10.38□□□□□ -0.75
SMC1A-205ENST00000469129 SFNP31947 248 aa10.38□□□□□ -0.75
SMC1A-205ENST00000469129 KRT76Q01546 638 aa10.38□□□□□ -0.75
SMC1A-205ENST00000469129 CYP4A11Q02928 519 aa10.38□□□□□ -0.75
SMC1A-205ENST00000469129 STK4Q13043 487 aa10.38□□□□□ -0.75
SMC1A-205ENST00000469129 NOLC1Q14978 699 aaKnown RBP eCLIP10.38□□□□□ -0.75
SMC1A-205ENST00000469129 NR1I3Q14994 352 aa10.38□□□□□ -0.75
SMC1A-205ENST00000469129 CENPPQ6IPU0 288 aa10.38□□□□□ -0.75
SMC1A-205ENST00000469129 CHADLQ6NUI6 762 aa10.38□□□□□ -0.75
SMC1A-205ENST00000469129 LBX2Q6XYB7 198 aa10.38□□□□□ -0.75
SMC1A-205ENST00000469129 PPP4R3CPQ6ZMV5 832 aa10.38□□□□□ -0.75
SMC1A-205ENST00000469129 GADL1Q6ZQY3 521 aa10.38□□□□□ -0.75
SMC1A-205ENST00000469129 MIER3Q7Z3K6 550 aa10.38□□□□□ -0.75
SMC1A-205ENST00000469129 RDM1Q8NG50 284 aa10.38□□□□□ -0.75
SMC1A-205ENST00000469129 NSUN6Q8TEA1 469 aaKnown RBP10.38□□□□□ -0.75
SMC1A-205ENST00000469129 GTF3C2Q8WUA4 911 aaPredicted RBP10.38□□□□□ -0.75
SMC1A-205ENST00000469129 OTUD5Q96G74 571 aa10.38□□□□□ -0.75
SMC1A-205ENST00000469129 NAP1L5Q96NT1 182 aaPredicted RBP10.38□□□□□ -0.75
SMC1A-205ENST00000469129 NACC1Q96RE7 527 aa10.38□□□□□ -0.75
SMC1A-205ENST00000469129 TAAR1Q96RJ0 339 aa10.38□□□□□ -0.75
SMC1A-205ENST00000469129 MPHOSPH6Q99547 160 aaKnown RBP10.38□□□□□ -0.75
SMC1A-205ENST00000469129 UNC45AQ9H3U1 944 aa10.38□□□□□ -0.75
SMC1A-205ENST00000469129 ELP3Q9H9T3 547 aa10.38□□□□□ -0.75
SMC1A-205ENST00000469129 AGO4Q9HCK5 861 aaKnown RBP10.38□□□□□ -0.75
SMC1A-205ENST00000469129 SLC39A2Q9NP94 309 aa10.38□□□□□ -0.75
SMC1A-205ENST00000469129 RTN4Q9NQC3 1192 aaKnown RBP10.38□□□□□ -0.75
SMC1A-205ENST00000469129 KCNH7Q9NS40 1196 aa10.38□□□□□ -0.75
SMC1A-205ENST00000469129 SPTLC3Q9NUV7 552 aa10.38□□□□□ -0.75
SMC1A-205ENST00000469129 KCNH4Q9UQ05 1017 aa10.38□□□□□ -0.75
SMC1A-205ENST00000469129 MAPK8IP1Q9UQF2 711 aa10.38□□□□□ -0.75
SMC1A-205ENST00000469129 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.38□□□□□ -0.753e-10■■■□□ 15.4
SMC1A-205ENST00000469129 LRRC10BA6NIK2 292 aa10.37□□□□□ -0.75
SMC1A-205ENST00000469129 B4DLN1 442 aa10.37□□□□□ -0.75
SMC1A-205ENST00000469129 EML1O00423 815 aa10.37□□□□□ -0.75
SMC1A-205ENST00000469129 DKC1O60832 514 aaKnown RBP eCLIP10.37□□□□□ -0.75
SMC1A-205ENST00000469129 MYCLP12524 364 aaPredicted RBP10.37□□□□□ -0.75
SMC1A-205ENST00000469129 SKILP12757 684 aa10.37□□□□□ -0.75
SMC1A-205ENST00000469129 ITGB5P18084 799 aa10.37□□□□□ -0.75
SMC1A-205ENST00000469129 CCZ1BP86790 482 aa10.37□□□□□ -0.75
SMC1A-205ENST00000469129 CCZ1P86791 482 aaPredicted RBP10.37□□□□□ -0.75
SMC1A-205ENST00000469129 BAATQ14032 418 aaPredicted RBP10.37□□□□□ -0.75
SMC1A-205ENST00000469129 PLS1Q14651 629 aa10.37□□□□□ -0.75
SMC1A-205ENST00000469129 TMEM132BQ14DG7 1078 aa10.37□□□□□ -0.75
SMC1A-205ENST00000469129 GNPTABQ3T906 1256 aa10.37□□□□□ -0.75
SMC1A-205ENST00000469129 B3GNT9Q6UX72 402 aa10.37□□□□□ -0.75
SMC1A-205ENST00000469129 STXBP4Q6ZWJ1 553 aa10.37□□□□□ -0.75
SMC1A-205ENST00000469129 FASTKD5Q7L8L6 764 aaKnown RBP10.37□□□□□ -0.75
SMC1A-205ENST00000469129 APTXQ7Z2E3 356 aaKnown RBP10.37□□□□□ -0.75
SMC1A-205ENST00000469129 PPFIBP1Q86W92 1011 aa10.37□□□□□ -0.75
SMC1A-205ENST00000469129 RIOX2Q8IUF8 465 aa10.37□□□□□ -0.75
SMC1A-205ENST00000469129 CNGA4Q8IV77 575 aa10.37□□□□□ -0.75
SMC1A-205ENST00000469129 DNERQ8NFT8 737 aa10.37□□□□□ -0.75
SMC1A-205ENST00000469129 IL31RAQ8NI17 732 aa10.37□□□□□ -0.75
SMC1A-205ENST00000469129 IQCDQ96DY2 449 aa10.37□□□□□ -0.75
SMC1A-205ENST00000469129 CCDC51Q96ER9 411 aa10.37□□□□□ -0.75
SMC1A-205ENST00000469129 DYDC2Q96IM9 177 aa10.37□□□□□ -0.75
SMC1A-205ENST00000469129 WNK4Q96J92 1243 aa10.37□□□□□ -0.75
SMC1A-205ENST00000469129 CNOT6LQ96LI5 555 aaKnown RBP10.37□□□□□ -0.75
SMC1A-205ENST00000469129 CCDC43Q96MW1 224 aaKnown RBP10.37□□□□□ -0.75
SMC1A-205ENST00000469129 HSD17B14Q9BPX1 270 aa10.37□□□□□ -0.75
SMC1A-205ENST00000469129 LXNQ9BS40 222 aa10.37□□□□□ -0.75
SMC1A-205ENST00000469129 SRRTQ9BXP5 876 aaKnown RBP10.37□□□□□ -0.75
SMC1A-205ENST00000469129 INTS13Q9NVM9 706 aa10.37□□□□□ -0.75
SMC1A-205ENST00000469129 SEL1LQ9UBV2 794 aa10.37□□□□□ -0.75
SMC1A-205ENST00000469129 ODF2LQ9ULJ1 636 aa10.37□□□□□ -0.75
SMC1A-205ENST00000469129 PYCARDQ9ULZ3 195 aa10.37□□□□□ -0.75
SMC1A-205ENST00000469129 AGTPBP1Q9UPW5 1226 aa10.37□□□□□ -0.75
SMC1A-205ENST00000469129 CLEC11AQ9Y240 323 aa10.37□□□□□ -0.75
SMC1A-205ENST00000469129 COL4A3BPQ9Y5P4 624 aa10.37□□□□□ -0.75
SMC1A-205ENST00000469129 SIP14410 1827 aa10.37□□□□□ -0.75
SMC1A-205ENST00000469129 NFASCO94856 1347 aa10.36□□□□□ -0.75
SMC1A-205ENST00000469129 ZNF236Q9UL36 1845 aa10.36□□□□□ -0.75
SMC1A-205ENST00000469129 A0A1W2PQC6 194 aa10.36□□□□□ -0.75
SMC1A-205ENST00000469129 TESPA1A2RU30 521 aaPredicted RBP10.36□□□□□ -0.75
SMC1A-205ENST00000469129 LGALS16A8MUM7 142 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms