RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 SESTD1Q86VW0 696 aa12.78□□□□□ -0.36
COL4A6-205ENST00000468338 DHX37Q8IY37 1157 aaKnown RBP12.78□□□□□ -0.36
COL4A6-205ENST00000468338 ZMYND12Q9H0C1 365 aa12.78□□□□□ -0.36
COL4A6-205ENST00000468338 RTEL1Q9NZ71 1219 aa12.78□□□□□ -0.36
COL4A6-205ENST00000468338 NAP1L2Q9ULW6 460 aaPredicted RBP12.78□□□□□ -0.36
COL4A6-205ENST00000468338 UBIAD1Q9Y5Z9 338 aa12.78□□□□□ -0.36
COL4A6-205ENST00000468338 SPDYE3A6NKU9 549 aa12.77□□□□□ -0.37
COL4A6-205ENST00000468338 GGPS1O95749 300 aa12.77□□□□□ -0.37
COL4A6-205ENST00000468338 F2P00734 622 aa12.77□□□□□ -0.37
COL4A6-205ENST00000468338 ITGB5P18084 799 aa12.77□□□□□ -0.37
COL4A6-205ENST00000468338 COL9A1P20849 921 aa12.77□□□□□ -0.37
COL4A6-205ENST00000468338 CCT2P78371 535 aaKnown RBP12.77□□□□□ -0.37
COL4A6-205ENST00000468338 NEDD9Q14511 834 aa12.77□□□□□ -0.37
COL4A6-205ENST00000468338 MFSD5Q6N075 450 aa12.77□□□□□ -0.37
COL4A6-205ENST00000468338 METTL7BQ6UX53 244 aa12.77□□□□□ -0.37
COL4A6-205ENST00000468338 NUDT18Q6ZVK8 323 aa12.77□□□□□ -0.37
COL4A6-205ENST00000468338 PACS2Q86VP3 889 aa12.77□□□□□ -0.37
COL4A6-205ENST00000468338 CRYGNQ8WXF5 182 aa12.77□□□□□ -0.37
COL4A6-205ENST00000468338 PHKBQ93100 1093 aa12.77□□□□□ -0.37
COL4A6-205ENST00000468338 GPRASP2Q96D09 838 aa12.77□□□□□ -0.37
COL4A6-205ENST00000468338 TRPV6Q9H1D0 765 aa12.77□□□□□ -0.37
COL4A6-205ENST00000468338 BCAS3Q9H6U6 928 aa12.77□□□□□ -0.37
COL4A6-205ENST00000468338 NCOA5Q9HCD5 579 aaKnown RBP12.77□□□□□ -0.37
COL4A6-205ENST00000468338 PDRG1Q9NUG6 133 aa12.77□□□□□ -0.37
COL4A6-205ENST00000468338 DOCK5Q9H7D0 1870 aa12.76□□□□□ -0.37
COL4A6-205ENST00000468338 SZT2Q5T011 3432 aa12.76□□□□□ -0.37
COL4A6-205ENST00000468338 PPP1R3GB7ZBB8 358 aa12.76□□□□□ -0.37
COL4A6-205ENST00000468338 SOX1O00570 391 aaPredicted RBP12.76□□□□□ -0.37
COL4A6-205ENST00000468338 MAFGO15525 162 aa12.76□□□□□ -0.37
COL4A6-205ENST00000468338 ADCY7P51828 1080 aa12.76□□□□□ -0.37
COL4A6-205ENST00000468338 EPHB4P54760 987 aa12.76□□□□□ -0.37
COL4A6-205ENST00000468338 AP3B2Q13367 1082 aa12.76□□□□□ -0.37
COL4A6-205ENST00000468338 NLRX1Q86UT6 975 aa12.76□□□□□ -0.37
COL4A6-205ENST00000468338 CDHR1Q96JP9 859 aa12.76□□□□□ -0.37
COL4A6-205ENST00000468338 CTAGE1Q96RT6 745 aa12.76□□□□□ -0.37
COL4A6-205ENST00000468338 C16orf70Q9BSU1 422 aa12.76□□□□□ -0.37
COL4A6-205ENST00000468338 NOC4LQ9BVI4 516 aaKnown RBP12.76□□□□□ -0.37
COL4A6-205ENST00000468338 ATP9AO75110 1047 aa12.75□□□□□ -0.37
COL4A6-205ENST00000468338 SUPT20HL2P0C7V6 817 aa12.75□□□□□ -0.37
COL4A6-205ENST00000468338 KCNA2P16389 499 aa12.75□□□□□ -0.37
COL4A6-205ENST00000468338 SREBF1P36956 1147 aa12.75□□□□□ -0.37
COL4A6-205ENST00000468338 FPGSQ05932 587 aa12.75□□□□□ -0.37
COL4A6-205ENST00000468338 TRIP12Q14669 1992 aaPredicted RBP12.75□□□□□ -0.37
COL4A6-205ENST00000468338 SHHQ15465 462 aa12.75□□□□□ -0.37
COL4A6-205ENST00000468338 C8orf34Q49A92 452 aa12.75□□□□□ -0.37
COL4A6-205ENST00000468338 C9orf50Q5SZB4 431 aa12.75□□□□□ -0.37
COL4A6-205ENST00000468338 C16orf59Q7L2K0 433 aa12.75□□□□□ -0.37
COL4A6-205ENST00000468338 CCDC12Q8WUD4 166 aaPredicted RBP12.75□□□□□ -0.37
COL4A6-205ENST00000468338 SPATA33Q96N06 139 aa12.75□□□□□ -0.37
COL4A6-205ENST00000468338 ANO3Q9BYT9 981 aa12.75□□□□□ -0.37
COL4A6-205ENST00000468338 EHMT1Q9H9B1 1298 aa12.75□□□□□ -0.37
COL4A6-205ENST00000468338 MLXIPQ9HAP2 919 aa12.75□□□□□ -0.37
COL4A6-205ENST00000468338 JADE2Q9NQC1 790 aa12.75□□□□□ -0.37
COL4A6-205ENST00000468338 SH3GLB2Q9NR46 395 aa12.75□□□□□ -0.37
COL4A6-205ENST00000468338 TRMT13Q9NUP7 481 aaKnown RBP12.75□□□□□ -0.37
COL4A6-205ENST00000468338 ADAMTS3O15072 1205 aa12.74□□□□□ -0.37
COL4A6-205ENST00000468338 PFKFB2O60825 505 aa12.74□□□□□ -0.37
COL4A6-205ENST00000468338 CYP3A4P08684 503 aa12.74□□□□□ -0.37
COL4A6-205ENST00000468338 GNA11P29992 359 aa12.74□□□□□ -0.37
COL4A6-205ENST00000468338 HOXC8P31273 242 aa12.74□□□□□ -0.37
COL4A6-205ENST00000468338 CYP2C18P33260 490 aa12.74□□□□□ -0.37
COL4A6-205ENST00000468338 PSEN2P49810 448 aa12.74□□□□□ -0.37
COL4A6-205ENST00000468338 AKAP17AQ02040 695 aaKnown RBP12.74□□□□□ -0.37
COL4A6-205ENST00000468338 SCRN1Q12765 414 aa12.74□□□□□ -0.37
COL4A6-205ENST00000468338 MCTP2Q6DN12 878 aa12.74□□□□□ -0.37
COL4A6-205ENST00000468338 CYFIP1Q7L576 1253 aa12.74□□□□□ -0.37
COL4A6-205ENST00000468338 FAM177A1Q8N128 213 aaPredicted RBP12.74□□□□□ -0.37
COL4A6-205ENST00000468338 GIMAP8Q8ND71 665 aaPredicted RBP12.74□□□□□ -0.37
COL4A6-205ENST00000468338 CYP2W1Q8TAV3 490 aa12.74□□□□□ -0.37
COL4A6-205ENST00000468338 TATDN2Q93075 761 aa12.74□□□□□ -0.37
COL4A6-205ENST00000468338 VWCEQ96DN2 955 aa12.74□□□□□ -0.37
COL4A6-205ENST00000468338 GPR20Q99678 358 aa12.74□□□□□ -0.37
COL4A6-205ENST00000468338 MXRA8Q9BRK3 442 aa12.74□□□□□ -0.37
COL4A6-205ENST00000468338 KATNAL1Q9BW62 490 aa12.74□□□□□ -0.37
COL4A6-205ENST00000468338 SLC26A6Q9BXS9 759 aa12.74□□□□□ -0.37
COL4A6-205ENST00000468338 HIPK3Q9H422 1215 aa12.74□□□□□ -0.37
COL4A6-205ENST00000468338 C6orf50Q9HD87 102 aa12.74□□□□□ -0.37
COL4A6-205ENST00000468338 TMEM260Q9NX78 707 aa12.74□□□□□ -0.37
COL4A6-205ENST00000468338 GTF2IRD1Q9UHL9 959 aa12.74□□□□□ -0.37
COL4A6-205ENST00000468338 TPCN1Q9ULQ1 816 aa12.74□□□□□ -0.37
COL4A6-205ENST00000468338 TELO2Q9Y4R8 837 aa12.74□□□□□ -0.37
COL4A6-205ENST00000468338 UMODL1Q5DID0 1318 aa12.73□□□□□ -0.37
COL4A6-205ENST00000468338 MEIS1O00470 390 aa12.73□□□□□ -0.37
COL4A6-205ENST00000468338 PPFIA3O75145 1194 aa12.73□□□□□ -0.37
COL4A6-205ENST00000468338 LGALS2P05162 132 aa12.73□□□□□ -0.37
COL4A6-205ENST00000468338 CSF2RAP15509 400 aa12.73□□□□□ -0.37
COL4A6-205ENST00000468338 AK2P54819 239 aa12.73□□□□□ -0.37
COL4A6-205ENST00000468338 RBL2Q08999 1139 aa12.73□□□□□ -0.37
COL4A6-205ENST00000468338 PPIGQ13427 754 aaKnown RBP eCLIP12.73□□□□□ -0.371e-6■■■■□ 25.5
COL4A6-205ENST00000468338 MTMR1Q13613 665 aa12.73□□□□□ -0.37
COL4A6-205ENST00000468338 ANKRD1Q15327 319 aa12.73□□□□□ -0.37
COL4A6-205ENST00000468338 CSPP1Q1MSJ5 1256 aa12.73□□□□□ -0.37
COL4A6-205ENST00000468338 CEP55Q53EZ4 464 aa12.73□□□□□ -0.37
COL4A6-205ENST00000468338 RASIP1Q5U651 963 aa12.73□□□□□ -0.37
COL4A6-205ENST00000468338 NIPA1Q7RTP0 329 aa12.73□□□□□ -0.37
COL4A6-205ENST00000468338 TMEM199Q8N511 208 aa12.73□□□□□ -0.37
COL4A6-205ENST00000468338 LRCH3Q96II8 777 aa12.73□□□□□ -0.37
COL4A6-205ENST00000468338 PGBD1Q96JS3 809 aa12.73□□□□□ -0.37
COL4A6-205ENST00000468338 PPP1R12CQ9BZL4 782 aa12.73□□□□□ -0.37
COL4A6-205ENST00000468338 WNT8AQ9H1J5 351 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms