RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 TBCAO75347 108 aaKnown RBP11.32□□□□□ -0.6
MSH5-213ENST00000468136 SKILP12757 684 aa11.32□□□□□ -0.6
MSH5-213ENST00000468136 COPB1P53618 953 aaKnown RBP11.32□□□□□ -0.6
MSH5-213ENST00000468136 FKBP3Q00688 224 aaKnown RBP11.32□□□□□ -0.6
MSH5-213ENST00000468136 COASYQ13057 564 aa11.32□□□□□ -0.6
MSH5-213ENST00000468136 MTMR1Q13613 665 aa11.32□□□□□ -0.6
MSH5-213ENST00000468136 ALCAMQ13740 583 aa11.32□□□□□ -0.6
MSH5-213ENST00000468136 PGM5Q15124 567 aa11.32□□□□□ -0.6
MSH5-213ENST00000468136 GPR162Q16538 588 aa11.32□□□□□ -0.6
MSH5-213ENST00000468136 ECM1Q16610 540 aa11.32□□□□□ -0.6
MSH5-213ENST00000468136 EDRF1Q3B7T1 1238 aa11.32□□□□□ -0.6
MSH5-213ENST00000468136 CCDC144BQ3MJ40 725 aa11.32□□□□□ -0.6
MSH5-213ENST00000468136 SNRNP48Q6IEG0 339 aaKnown RBP11.32□□□□□ -0.6
MSH5-213ENST00000468136 SAMD1Q6SPF0 538 aaPredicted RBP11.32□□□□□ -0.6
MSH5-213ENST00000468136 APTXQ7Z2E3 356 aaKnown RBP11.32□□□□□ -0.6
MSH5-213ENST00000468136 VSIG10LQ86VR7 867 aa11.32□□□□□ -0.6
MSH5-213ENST00000468136 RIOX2Q8IUF8 465 aa11.32□□□□□ -0.6
MSH5-213ENST00000468136 SMYD4Q8IYR2 804 aaPredicted RBP11.32□□□□□ -0.6
MSH5-213ENST00000468136 TBC1D5Q92609 795 aa11.32□□□□□ -0.6
MSH5-213ENST00000468136 CDCA5Q96FF9 252 aa11.32□□□□□ -0.6
MSH5-213ENST00000468136 NAP1L5Q96NT1 182 aaPredicted RBP11.32□□□□□ -0.6
MSH5-213ENST00000468136 PANX2Q96RD6 677 aa11.32□□□□□ -0.6
MSH5-213ENST00000468136 ZSWIM4Q9H7M6 989 aa11.32□□□□□ -0.6
MSH5-213ENST00000468136 AGO4Q9HCK5 861 aaKnown RBP11.32□□□□□ -0.6
MSH5-213ENST00000468136 OLFML3Q9NRN5 406 aa11.32□□□□□ -0.6
MSH5-213ENST00000468136 KCNH7Q9NS40 1196 aa11.32□□□□□ -0.6
MSH5-213ENST00000468136 NRBP1Q9UHY1 535 aa11.32□□□□□ -0.6
MSH5-213ENST00000468136 DBR1Q9UK59 544 aaKnown RBP11.32□□□□□ -0.6
MSH5-213ENST00000468136 SCAF8Q9UPN6 1271 aaKnown RBP11.32□□□□□ -0.6
MSH5-213ENST00000468136 PHIPQ8WWQ0 1821 aa11.32□□□□□ -0.6
MSH5-213ENST00000468136 NFASCO94856 1347 aa11.32□□□□□ -0.6
MSH5-213ENST00000468136 RBBP6Q7Z6E9 1792 aaKnown RBP11.31□□□□□ -0.6
MSH5-213ENST00000468136 LGALS16A8MUM7 142 aa11.31□□□□□ -0.6
MSH5-213ENST00000468136 WDR64B1ANS9 1081 aa11.31□□□□□ -0.6
MSH5-213ENST00000468136 E9PMD0 336 aa11.31□□□□□ -0.6
MSH5-213ENST00000468136 EIF3DO15371 548 aaKnown RBP eCLIP11.31□□□□□ -0.6
MSH5-213ENST00000468136 ARHGAP6O43182 974 aa11.31□□□□□ -0.6
MSH5-213ENST00000468136 SLITRK3O94933 977 aa11.31□□□□□ -0.6
MSH5-213ENST00000468136 SSBP05455 408 aaKnown RBP eCLIP11.31□□□□□ -0.6
MSH5-213ENST00000468136 MAPTP10636 758 aaKnown RBP11.31□□□□□ -0.6
MSH5-213ENST00000468136 ITGB5P18084 799 aa11.31□□□□□ -0.6
MSH5-213ENST00000468136 OSBPP22059 807 aa11.31□□□□□ -0.6
MSH5-213ENST00000468136 SCP2P22307 547 aa11.31□□□□□ -0.6
MSH5-213ENST00000468136 ABCD1P33897 745 aa11.31□□□□□ -0.6
MSH5-213ENST00000468136 PBX1P40424 430 aa11.31□□□□□ -0.6
MSH5-213ENST00000468136 IRX3P78415 501 aaPredicted RBP11.31□□□□□ -0.6
MSH5-213ENST00000468136 PPP2R3AQ06190 1150 aa11.31□□□□□ -0.6
MSH5-213ENST00000468136 TMEM132BQ14DG7 1078 aa11.31□□□□□ -0.6
MSH5-213ENST00000468136 KRT31Q15323 416 aa11.31□□□□□ -0.6
MSH5-213ENST00000468136 HERC4Q5GLZ8 1057 aaPredicted RBP11.31□□□□□ -0.6
MSH5-213ENST00000468136 MUM1L1Q5H9M0 696 aa11.31□□□□□ -0.6
MSH5-213ENST00000468136 PRAMEF18Q5VWM3 479 aa11.31□□□□□ -0.6
MSH5-213ENST00000468136 ZNF746Q6NUN9 644 aaPredicted RBP11.31□□□□□ -0.6
MSH5-213ENST00000468136 NSMFQ6X4W1 530 aa11.31□□□□□ -0.6
MSH5-213ENST00000468136 DYMQ7RTS9 669 aa11.31□□□□□ -0.6
MSH5-213ENST00000468136 MIER3Q7Z3K6 550 aa11.31□□□□□ -0.6
MSH5-213ENST00000468136 KCNK18Q7Z418 384 aa11.31□□□□□ -0.6
MSH5-213ENST00000468136 SMAP1Q8IYB5 467 aaPredicted RBP11.31□□□□□ -0.6
MSH5-213ENST00000468136 KIAA0895Q8NCT3 520 aa11.31□□□□□ -0.6
MSH5-213ENST00000468136 CYP2W1Q8TAV3 490 aa11.31□□□□□ -0.6
MSH5-213ENST00000468136 SRRTQ9BXP5 876 aaKnown RBP11.31□□□□□ -0.6
MSH5-213ENST00000468136 TAF1DQ9H5J8 278 aaPredicted RBP11.31□□□□□ -0.6
MSH5-213ENST00000468136 PNMA3Q9UL41 463 aa11.31□□□□□ -0.6
MSH5-213ENST00000468136 AGTPBP1Q9UPW5 1226 aa11.31□□□□□ -0.6
MSH5-213ENST00000468136 SLC45A1Q9Y2W3 748 aa11.31□□□□□ -0.6
MSH5-213ENST00000468136 LOXHD1Q8IVV2 1947 aa11.31□□□□□ -0.6
MSH5-213ENST00000468136 POTEFA5A3E0 1075 aa11.3□□□□□ -0.6
MSH5-213ENST00000468136 AKR1B15C9JRZ8 316 aaPredicted RBP11.3□□□□□ -0.6
MSH5-213ENST00000468136 ZSCAN12O43309 604 aa11.3□□□□□ -0.6
MSH5-213ENST00000468136 NR3C2P08235 984 aa11.3□□□□□ -0.6
MSH5-213ENST00000468136 POTEIP0CG38 1075 aa11.3□□□□□ -0.6
MSH5-213ENST00000468136 ARP10275 920 aa11.3□□□□□ -0.6
MSH5-213ENST00000468136 GUCY2CP25092 1073 aa11.3□□□□□ -0.6
MSH5-213ENST00000468136 RPL13P26373 211 aaKnown RBP11.3□□□□□ -0.6
MSH5-213ENST00000468136 SNRPFP62306 86 aaKnown RBP11.3□□□□□ -0.6
MSH5-213ENST00000468136 CCZ1BP86790 482 aa11.3□□□□□ -0.6
MSH5-213ENST00000468136 CCZ1P86791 482 aaPredicted RBP11.3□□□□□ -0.6
MSH5-213ENST00000468136 BAATQ14032 418 aaPredicted RBP11.3□□□□□ -0.6
MSH5-213ENST00000468136 GIT2Q14161 759 aa11.3□□□□□ -0.6
MSH5-213ENST00000468136 NFIL3Q16649 462 aa11.3□□□□□ -0.6
MSH5-213ENST00000468136 BMT2Q1RMZ1 405 aa11.3□□□□□ -0.6
MSH5-213ENST00000468136 FIGNQ5HY92 759 aa11.3□□□□□ -0.6
MSH5-213ENST00000468136 FKBP15Q5T1M5 1219 aa11.3□□□□□ -0.6
MSH5-213ENST00000468136 POTEGQ6S5H5 508 aa11.3□□□□□ -0.6
MSH5-213ENST00000468136 POTEEQ6S8J3 1075 aa11.3□□□□□ -0.6
MSH5-213ENST00000468136 C4orf19Q8IY42 314 aa11.3□□□□□ -0.6
MSH5-213ENST00000468136 GOLGA5Q8TBA6 731 aa11.3□□□□□ -0.6
MSH5-213ENST00000468136 ZNF830Q96NB3 372 aaPredicted RBP11.3□□□□□ -0.6
MSH5-213ENST00000468136 INPP4AQ96PE3 977 aaPredicted RBP11.3□□□□□ -0.6
MSH5-213ENST00000468136 TAAR1Q96RJ0 339 aa11.3□□□□□ -0.6
MSH5-213ENST00000468136 DUSP9Q99956 384 aaKnown RBP11.3□□□□□ -0.6
MSH5-213ENST00000468136 TMX1Q9H3N1 280 aa11.3□□□□□ -0.6
MSH5-213ENST00000468136 UNC45AQ9H3U1 944 aa11.3□□□□□ -0.6
MSH5-213ENST00000468136 SLC39A2Q9NP94 309 aa11.3□□□□□ -0.6
MSH5-213ENST00000468136 ANKEF1Q9NU02 776 aa11.3□□□□□ -0.6
MSH5-213ENST00000468136 INTS13Q9NVM9 706 aa11.3□□□□□ -0.6
MSH5-213ENST00000468136 CYP39A1Q9NYL5 469 aa11.3□□□□□ -0.6
MSH5-213ENST00000468136 COL20A1Q9P218 1284 aa11.3□□□□□ -0.6
MSH5-213ENST00000468136 FAM184BQ9ULE4 1060 aa11.3□□□□□ -0.6
MSH5-213ENST00000468136 PCDHA2Q9Y5H9 948 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms