RNA–Protein interactions for RNA: ENST00000467957.1

YBX1-204, Transcript of Y-box binding protein 1, humanhuman

TSL 2

Gene YBX1, Length 770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-204ENST00000467957 TRIM50Q86XT4 487 aa21.21■□□□□ 0.99
YBX1-204ENST00000467957 CCDC155Q8N6L0 562 aa21.21■□□□□ 0.99
YBX1-204ENST00000467957 KCNJ14Q9UNX9 436 aa21.21■□□□□ 0.99
YBX1-204ENST00000467957 EMSYQ7Z589 1322 aa21.21■□□□□ 0.99
YBX1-204ENST00000467957 IPO5O00410 1097 aaKnown RBP21.2■□□□□ 0.98
YBX1-204ENST00000467957 DHX15O43143 795 aaKnown RBP21.2■□□□□ 0.98
YBX1-204ENST00000467957 LGR5O75473 907 aa21.2■□□□□ 0.98
YBX1-204ENST00000467957 SMIM10L2AP0DMW4 78 aa21.2■□□□□ 0.98
YBX1-204ENST00000467957 SMIM10L2BP0DMW5 78 aa21.2■□□□□ 0.98
YBX1-204ENST00000467957 ST3GAL1Q11201 340 aa21.2■□□□□ 0.98
YBX1-204ENST00000467957 HIC1Q14526 733 aa21.2■□□□□ 0.98
YBX1-204ENST00000467957 RABEP1Q15276 862 aa21.2■□□□□ 0.98
YBX1-204ENST00000467957 TMEM240Q5SV17 173 aa21.2■□□□□ 0.98
YBX1-204ENST00000467957 GPR153Q6NV75 609 aa21.2■□□□□ 0.98
YBX1-204ENST00000467957 PSRC1Q6PGN9 363 aaPredicted RBP21.2■□□□□ 0.98
YBX1-204ENST00000467957 RETREG2Q8NC44 543 aa21.2■□□□□ 0.98
YBX1-204ENST00000467957 TBCKQ8TEA7 893 aa21.2■□□□□ 0.98
YBX1-204ENST00000467957 DHX38Q92620 1227 aaKnown RBP21.2■□□□□ 0.98
YBX1-204ENST00000467957 LENG9Q96B70 501 aa21.2■□□□□ 0.98
YBX1-204ENST00000467957 ZSCAN31Q96LW9 406 aaPredicted RBP21.2■□□□□ 0.98
YBX1-204ENST00000467957 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.2■□□□□ 0.989e-7■□□□□ 10.7
YBX1-204ENST00000467957 SMARCAD1Q9H4L7 1026 aa21.2■□□□□ 0.98
YBX1-204ENST00000467957 ERAP1Q9NZ08 941 aa21.2■□□□□ 0.98
YBX1-204ENST00000467957 TANC1Q9C0D5 1861 aa21.2■□□□□ 0.98
YBX1-204ENST00000467957 C17orf102A2RUQ5 167 aa21.19■□□□□ 0.98
YBX1-204ENST00000467957 DTNBO60941 627 aa21.19■□□□□ 0.98
YBX1-204ENST00000467957 ATG7O95352 703 aa21.19■□□□□ 0.98
YBX1-204ENST00000467957 IQCF3P0C7M6 154 aa21.19■□□□□ 0.98
YBX1-204ENST00000467957 RFC2P35250 354 aa21.19■□□□□ 0.98
YBX1-204ENST00000467957 ACTR2P61160 394 aa21.19■□□□□ 0.98
YBX1-204ENST00000467957 KRT25Q7Z3Z0 450 aa21.19■□□□□ 0.98
YBX1-204ENST00000467957 RPUSD2Q8IZ73 545 aaKnown RBP21.19■□□□□ 0.98
YBX1-204ENST00000467957 AFAP1L1Q8TED9 768 aa21.19■□□□□ 0.98
YBX1-204ENST00000467957 ZNF577Q9BSK1 485 aa21.19■□□□□ 0.98
YBX1-204ENST00000467957 RNPEPQ9H4A4 650 aa21.19■□□□□ 0.98
YBX1-204ENST00000467957 TBC1D22BQ9NU19 505 aa21.19■□□□□ 0.98
YBX1-204ENST00000467957 CYP3A7-CYP3A51PA0A087WV96 503 aa21.18■□□□□ 0.98
YBX1-204ENST00000467957 PFKMP08237 780 aa21.18■□□□□ 0.98
YBX1-204ENST00000467957 ACRP10323 421 aa21.18■□□□□ 0.98
YBX1-204ENST00000467957 GNAT1P11488 350 aa21.18■□□□□ 0.98
YBX1-204ENST00000467957 CYP3A7P24462 503 aa21.18■□□□□ 0.98
YBX1-204ENST00000467957 ZNF200P98182 395 aaPredicted RBP21.18■□□□□ 0.98
YBX1-204ENST00000467957 NONOQ15233 471 aaKnown RBP eCLIP21.18■□□□□ 0.98
YBX1-204ENST00000467957 PRR16Q569H4 304 aa21.18■□□□□ 0.98
YBX1-204ENST00000467957 RASIP1Q5U651 963 aa21.18■□□□□ 0.98
YBX1-204ENST00000467957 SERINC5Q86VE9 423 aa21.18■□□□□ 0.98
YBX1-204ENST00000467957 VWCEQ96DN2 955 aa21.18■□□□□ 0.98
YBX1-204ENST00000467957 SCLYQ96I15 445 aa21.18■□□□□ 0.98
YBX1-204ENST00000467957 LRCH3Q96II8 777 aa21.18■□□□□ 0.98
YBX1-204ENST00000467957 RNPC3Q96LT9 517 aaKnown RBP21.18■□□□□ 0.98
YBX1-204ENST00000467957 PCYT2Q99447 389 aa21.18■□□□□ 0.98
YBX1-204ENST00000467957 LLPHQ9BRT6 129 aaKnown RBP21.18■□□□□ 0.98
YBX1-204ENST00000467957 SH2B1Q9NRF2 756 aaPredicted RBP21.18■□□□□ 0.98
YBX1-204ENST00000467957 GJB4Q9NTQ9 266 aa21.18■□□□□ 0.98
YBX1-204ENST00000467957 IGKV6D-21A0A0A0MT36 114 aa21.17■□□□□ 0.98
YBX1-204ENST00000467957 JAK2O60674 1132 aa21.17■□□□□ 0.98
YBX1-204ENST00000467957 SLC34A2O95436 690 aa21.17■□□□□ 0.98
YBX1-204ENST00000467957 CCNE2O96020 404 aa21.17■□□□□ 0.98
YBX1-204ENST00000467957 ADAM17P78536 824 aa21.17■□□□□ 0.98
YBX1-204ENST00000467957 TRIM71Q2Q1W2 868 aaKnown RBP21.17■□□□□ 0.98
YBX1-204ENST00000467957 Q4G0T1 1027 aa21.17■□□□□ 0.98
YBX1-204ENST00000467957 MOXD1Q6UVY6 613 aa21.17■□□□□ 0.98
YBX1-204ENST00000467957 ZNF365Q70YC5 407 aa21.17■□□□□ 0.98
YBX1-204ENST00000467957 PLPPR4Q7Z2D5 763 aa21.17■□□□□ 0.98
YBX1-204ENST00000467957 GLG1Q92896 1179 aa21.17■□□□□ 0.98
YBX1-204ENST00000467957 ATP6V0A1Q93050 837 aa21.17■□□□□ 0.98
YBX1-204ENST00000467957 AZI2Q9H6S1 392 aa21.17■□□□□ 0.98
YBX1-204ENST00000467957 NRCAMQ92823 1304 aa21.17■□□□□ 0.98
YBX1-204ENST00000467957 TRIP12Q14669 1992 aaPredicted RBP21.17■□□□□ 0.98
YBX1-204ENST00000467957 LAMA3Q16787 3333 aa21.16■□□□□ 0.98
YBX1-204ENST00000467957 PARNO95453 639 aaKnown RBP21.16■□□□□ 0.98
YBX1-204ENST00000467957 FGBP02675 491 aa21.16■□□□□ 0.98
YBX1-204ENST00000467957 CKBP12277 381 aa21.16■□□□□ 0.98
YBX1-204ENST00000467957 SELPP16109 830 aa21.16■□□□□ 0.98
YBX1-204ENST00000467957 ZNF746Q6NUN9 644 aaPredicted RBP21.16■□□□□ 0.98
YBX1-204ENST00000467957 ABHD15Q6UXT9 468 aa21.16■□□□□ 0.98
YBX1-204ENST00000467957 HERVK_113Q902F9 699 aa21.16■□□□□ 0.98
YBX1-204ENST00000467957 MBOAT7Q96N66 472 aa21.16■□□□□ 0.98
YBX1-204ENST00000467957 TBC1D32Q96NH3 1257 aa21.16■□□□□ 0.98
YBX1-204ENST00000467957 SETD4Q9NVD3 440 aa21.16■□□□□ 0.98
YBX1-204ENST00000467957 CCDC194A0A1B0GVG4 234 aa21.15■□□□□ 0.98
YBX1-204ENST00000467957 MSH4O15457 936 aa21.15■□□□□ 0.98
YBX1-204ENST00000467957 TREHO43280 583 aa21.15■□□□□ 0.98
YBX1-204ENST00000467957 SLC26A2P50443 739 aa21.15■□□□□ 0.98
YBX1-204ENST00000467957 KRT76Q01546 638 aa21.15■□□□□ 0.98
YBX1-204ENST00000467957 LRRC8DQ7L1W4 858 aa21.15■□□□□ 0.98
YBX1-204ENST00000467957 CCDC83Q8IWF9 413 aa21.15■□□□□ 0.98
YBX1-204ENST00000467957 LMBR1Q8WVP7 490 aa21.15■□□□□ 0.98
YBX1-204ENST00000467957 WNT8BQ93098 351 aa21.15■□□□□ 0.98
YBX1-204ENST00000467957 RIT2Q99578 217 aa21.15■□□□□ 0.98
YBX1-204ENST00000467957 SCN5AQ14524 2016 aa21.14■□□□□ 0.98
YBX1-204ENST00000467957 DDX39AO00148 427 aaKnown RBP21.14■□□□□ 0.97
YBX1-204ENST00000467957 ST18O60284 1047 aa21.14■□□□□ 0.97
YBX1-204ENST00000467957 MARK3P27448 753 aa21.14■□□□□ 0.97
YBX1-204ENST00000467957 STAT5BP51692 787 aa21.14■□□□□ 0.97
YBX1-204ENST00000467957 SMAD3P84022 425 aaKnown RBP21.14■□□□□ 0.97
YBX1-204ENST00000467957 SMAP1Q8IYB5 467 aaPredicted RBP21.14■□□□□ 0.97
YBX1-204ENST00000467957 OXER1Q8TDS5 423 aa21.14■□□□□ 0.97
YBX1-204ENST00000467957 SLC5A5Q92911 643 aa21.14■□□□□ 0.97
YBX1-204ENST00000467957 TNPO1Q92973 898 aaKnown RBP21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms