RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 SRGAP2CP0DJJ0 459 aa5.58□□□□□ -1.52
VPS50-209ENST00000467326 PYGMP11217 842 aa5.58□□□□□ -1.52
VPS50-209ENST00000467326 PDE6AP16499 860 aa5.58□□□□□ -1.52
VPS50-209ENST00000467326 EPHA5P54756 1037 aa5.58□□□□□ -1.52
VPS50-209ENST00000467326 SQSTM1Q13501 440 aa5.58□□□□□ -1.52
VPS50-209ENST00000467326 GPR19Q15760 415 aa5.58□□□□□ -1.52
VPS50-209ENST00000467326 PAN2Q504Q3 1202 aaKnown RBP5.58□□□□□ -1.52
VPS50-209ENST00000467326 FIGNQ5HY92 759 aa5.58□□□□□ -1.52
VPS50-209ENST00000467326 TMC5Q6UXY8 1006 aa5.58□□□□□ -1.52
VPS50-209ENST00000467326 SYT8Q8NBV8 401 aa5.58□□□□□ -1.52
VPS50-209ENST00000467326 SLC7A14Q8TBB6 771 aa5.58□□□□□ -1.52
VPS50-209ENST00000467326 FEZF2Q8TBJ5 459 aa5.58□□□□□ -1.52
VPS50-209ENST00000467326 SH3RF2Q8TEC5 729 aa5.58□□□□□ -1.52
VPS50-209ENST00000467326 CLEC4DQ8WXI8 215 aa5.58□□□□□ -1.52
VPS50-209ENST00000467326 MAGEB10Q96LZ2 347 aaPredicted RBP5.58□□□□□ -1.52
VPS50-209ENST00000467326 CLIC6Q96NY7 704 aa5.58□□□□□ -1.52
VPS50-209ENST00000467326 TMEM209Q96SK2 561 aa5.58□□□□□ -1.52
VPS50-209ENST00000467326 CBLCQ9ULV8 474 aa5.58□□□□□ -1.52
VPS50-209ENST00000467326 GSTA4O15217 222 aa5.57□□□□□ -1.52
VPS50-209ENST00000467326 CELA3BP08861 270 aa5.57□□□□□ -1.52
VPS50-209ENST00000467326 KRT15P19012 456 aa5.57□□□□□ -1.52
VPS50-209ENST00000467326 RPL13P26373 211 aaKnown RBP5.57□□□□□ -1.52
VPS50-209ENST00000467326 KCNC1P48547 511 aa5.57□□□□□ -1.52
VPS50-209ENST00000467326 SARSP49591 514 aaKnown RBP5.57□□□□□ -1.52
VPS50-209ENST00000467326 VASNQ6EMK4 673 aa5.57□□□□□ -1.52
VPS50-209ENST00000467326 ARHGAP36Q6ZRI8 547 aa5.57□□□□□ -1.52
VPS50-209ENST00000467326 C16orf59Q7L2K0 433 aa5.57□□□□□ -1.52
VPS50-209ENST00000467326 PTRH1Q86Y79 214 aaKnown RBP5.57□□□□□ -1.52
VPS50-209ENST00000467326 CISD2Q8N5K1 135 aaKnown RBP5.57□□□□□ -1.52
VPS50-209ENST00000467326 SCLYQ96I15 445 aa5.57□□□□□ -1.52
VPS50-209ENST00000467326 KANSL2Q9H9L4 492 aa5.57□□□□□ -1.52
VPS50-209ENST00000467326 TRIM39Q9HCM9 518 aa5.57□□□□□ -1.52
VPS50-209ENST00000467326 HSPBP1Q9NZL4 362 aa5.57□□□□□ -1.52
VPS50-209ENST00000467326 RBPJLQ9UBG7 517 aa5.57□□□□□ -1.52
VPS50-209ENST00000467326 TCRBV5S4A2TA0A5A2 114 aa5.56□□□□□ -1.52
VPS50-209ENST00000467326 TCRBV16S1A1N1A0A5B0 115 aa5.56□□□□□ -1.52
VPS50-209ENST00000467326 ZNF561-AS1K7EIQ3 104 aa5.56□□□□□ -1.52
VPS50-209ENST00000467326 MAN2B1O00754 1011 aa5.56□□□□□ -1.52
VPS50-209ENST00000467326 PLD2O14939 933 aa5.56□□□□□ -1.52
VPS50-209ENST00000467326 KCNQ2O43526 872 aa5.56□□□□□ -1.52
VPS50-209ENST00000467326 ADRB1P08588 477 aa5.56□□□□□ -1.52
VPS50-209ENST00000467326 FAHP16930 419 aa5.56□□□□□ -1.52
VPS50-209ENST00000467326 DNM2P50570 870 aa5.56□□□□□ -1.52
VPS50-209ENST00000467326 GJA9P57773 515 aa5.56□□□□□ -1.52
VPS50-209ENST00000467326 CRY1Q16526 586 aa5.56□□□□□ -1.52
VPS50-209ENST00000467326 CD276Q5ZPR3 534 aa5.56□□□□□ -1.52
VPS50-209ENST00000467326 EP400NLQ6ZTU2 488 aa5.56□□□□□ -1.52
VPS50-209ENST00000467326 FGD2Q7Z6J4 655 aa5.56□□□□□ -1.52
VPS50-209ENST00000467326 NLGN4XQ8N0W4 816 aa5.56□□□□□ -1.52
VPS50-209ENST00000467326 CELF4Q9BZC1 486 aaKnown RBP5.56□□□□□ -1.52
VPS50-209ENST00000467326 PDGFDQ9GZP0 370 aaPredicted RBP5.56□□□□□ -1.52
VPS50-209ENST00000467326 XYLT2Q9H1B5 865 aa5.56□□□□□ -1.52
VPS50-209ENST00000467326 DLL4Q9NR61 685 aa5.56□□□□□ -1.52
VPS50-209ENST00000467326 USP40Q9NVE5 1235 aa5.56□□□□□ -1.52
VPS50-209ENST00000467326 TMEM260Q9NX78 707 aa5.56□□□□□ -1.52
VPS50-209ENST00000467326 COQ6Q9Y2Z9 468 aa5.56□□□□□ -1.52
VPS50-209ENST00000467326 ATP23Q9Y6H3 246 aa5.56□□□□□ -1.52
VPS50-209ENST00000467326 ADAMTS20P59510 1910 aa5.55□□□□□ -1.52
VPS50-209ENST00000467326 OTOL1A6NHN0 477 aaPredicted RBP5.55□□□□□ -1.52
VPS50-209ENST00000467326 CYP7B1O75881 506 aa5.55□□□□□ -1.52
VPS50-209ENST00000467326 RAPGEF3O95398 923 aa5.55□□□□□ -1.52
VPS50-209ENST00000467326 AMY2AP04746 511 aa5.55□□□□□ -1.52
VPS50-209ENST00000467326 ZNF28P17035 718 aa5.55□□□□□ -1.52
VPS50-209ENST00000467326 PTPN1P18031 435 aaKnown RBP5.55□□□□□ -1.52
VPS50-209ENST00000467326 AMY2BP19961 511 aa5.55□□□□□ -1.52
VPS50-209ENST00000467326 PRR31Q5SQ13 230 aa5.55□□□□□ -1.52
VPS50-209ENST00000467326 NT5DC1Q5TFE4 455 aa5.55□□□□□ -1.52
VPS50-209ENST00000467326 PRAMEF18Q5VWM3 479 aa5.55□□□□□ -1.52
VPS50-209ENST00000467326 ZNF761Q86XN6 746 aaPredicted RBP5.55□□□□□ -1.52
VPS50-209ENST00000467326 PROSER1Q86XN7 944 aa5.55□□□□□ -1.52
VPS50-209ENST00000467326 DTX3Q8N9I9 347 aa5.55□□□□□ -1.52
VPS50-209ENST00000467326 ADAMTS17Q8TE56 1095 aa5.55□□□□□ -1.52
VPS50-209ENST00000467326 CROTQ9UKG9 612 aa5.55□□□□□ -1.52
VPS50-209ENST00000467326 WASF3Q9UPY6 502 aa5.55□□□□□ -1.52
VPS50-209ENST00000467326 ESYT3A0FGR9 886 aa5.54□□□□□ -1.52
VPS50-209ENST00000467326 CKMP06732 381 aa5.54□□□□□ -1.52
VPS50-209ENST00000467326 GJA4P35212 333 aa5.54□□□□□ -1.52
VPS50-209ENST00000467326 JAM2P57087 298 aa5.54□□□□□ -1.52
VPS50-209ENST00000467326 RTP5Q14D33 572 aa5.54□□□□□ -1.52
VPS50-209ENST00000467326 SKIDA1Q1XH10 827 aa5.54□□□□□ -1.52
VPS50-209ENST00000467326 FNDC3BQ53EP0 1204 aaKnown RBP5.54□□□□□ -1.52
VPS50-209ENST00000467326 FAM26FQ5R3K3 315 aa5.54□□□□□ -1.52
VPS50-209ENST00000467326 OSTM1Q86WC4 334 aa5.54□□□□□ -1.52
VPS50-209ENST00000467326 ZDHHC14Q8IZN3 488 aa5.54□□□□□ -1.52
VPS50-209ENST00000467326 RNPC3Q96LT9 517 aaKnown RBP5.54□□□□□ -1.52
VPS50-209ENST00000467326 TMPRSS5Q9H3S3 457 aa5.54□□□□□ -1.52
VPS50-209ENST00000467326 SMURF1Q9HCE7 757 aa5.54□□□□□ -1.52
VPS50-209ENST00000467326 RIC8BQ9NVN3 520 aa5.54□□□□□ -1.52
VPS50-209ENST00000467326 USP35Q9P2H5 1018 aa5.54□□□□□ -1.52
VPS50-209ENST00000467326 PRAMEF25A6NGN4 478 aa5.53□□□□□ -1.52
VPS50-209ENST00000467326 ZNF839A8K0R7 811 aa5.53□□□□□ -1.52
VPS50-209ENST00000467326 ACOT7O00154 380 aa5.53□□□□□ -1.52
VPS50-209ENST00000467326 KCNK3O14649 394 aa5.53□□□□□ -1.52
VPS50-209ENST00000467326 ASMTLO95671 621 aa5.53□□□□□ -1.52
VPS50-209ENST00000467326 IGFALSP35858 605 aa5.53□□□□□ -1.52
VPS50-209ENST00000467326 LACTBP83111 547 aaPredicted RBP5.53□□□□□ -1.52
VPS50-209ENST00000467326 RGL3Q3MIN7 710 aa5.53□□□□□ -1.52
VPS50-209ENST00000467326 BTBD8Q5XKL5 378 aa5.53□□□□□ -1.52
VPS50-209ENST00000467326 HHIPL2Q6UWX4 724 aa5.53□□□□□ -1.52
VPS50-209ENST00000467326 FRMD5Q7Z6J6 570 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms