RNA–Protein interactions for RNA: ENST00000467238.1

SND1-205, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-205ENST00000467238 TMEM63BQ5T3F8 832 aa8.26□□□□□ -1.09
SND1-205ENST00000467238 LCE3BQ5TA77 95 aa8.26□□□□□ -1.09
SND1-205ENST00000467238 MFSD5Q6N075 450 aa8.26□□□□□ -1.09
SND1-205ENST00000467238 PDXDC2PQ6P474 469 aa8.26□□□□□ -1.09
SND1-205ENST00000467238 CWC27Q6UX04 472 aaKnown RBP8.26□□□□□ -1.09
SND1-205ENST00000467238 CXCL17Q6UXB2 119 aa8.26□□□□□ -1.09
SND1-205ENST00000467238 NOL8Q76FK4 1167 aaKnown RBP8.26□□□□□ -1.09
SND1-205ENST00000467238 EEPD1Q7L9B9 569 aa8.26□□□□□ -1.09
SND1-205ENST00000467238 SLC43A3Q8NBI5 491 aa8.26□□□□□ -1.09
SND1-205ENST00000467238 CLEC4DQ8WXI8 215 aa8.26□□□□□ -1.09
SND1-205ENST00000467238 ESR2Q92731 530 aa8.26□□□□□ -1.09
SND1-205ENST00000467238 VTI1AQ96AJ9 217 aa8.26□□□□□ -1.09
SND1-205ENST00000467238 RNPC3Q96LT9 517 aaKnown RBP8.26□□□□□ -1.09
SND1-205ENST00000467238 KRTAP4-12Q9BQ66 201 aa8.26□□□□□ -1.09
SND1-205ENST00000467238 TTYH1Q9H313 450 aaPredicted RBP8.26□□□□□ -1.09
SND1-205ENST00000467238 DIAPH3Q9NSV4 1193 aa8.26□□□□□ -1.09
SND1-205ENST00000467238 ADD3Q9UEY8 706 aaKnown RBP8.26□□□□□ -1.09
SND1-205ENST00000467238 PNMA2Q9UL42 364 aa8.26□□□□□ -1.09
SND1-205ENST00000467238 PTPRSQ13332 1948 aa8.26□□□□□ -1.09
SND1-205ENST00000467238 GRIN2DO15399 1336 aa8.26□□□□□ -1.09
SND1-205ENST00000467238 TCF20Q9UGU0 1960 aaKnown RBP8.25□□□□□ -1.09
SND1-205ENST00000467238 PTPDC1A2A3K4 754 aa8.25□□□□□ -1.09
SND1-205ENST00000467238 KRBA1A5PL33 1030 aa8.25□□□□□ -1.09
SND1-205ENST00000467238 HIP1O00291 1037 aa8.25□□□□□ -1.09
SND1-205ENST00000467238 ZNF213O14771 459 aa8.25□□□□□ -1.09
SND1-205ENST00000467238 DYNC1LI2O43237 492 aaPredicted RBP8.25□□□□□ -1.09
SND1-205ENST00000467238 CABYRO75952 493 aa8.25□□□□□ -1.09
SND1-205ENST00000467238 CD4P01730 458 aa8.25□□□□□ -1.09
SND1-205ENST00000467238 RPS6P62753 249 aaKnown RBP8.25□□□□□ -1.09
SND1-205ENST00000467238 PPIGQ13427 754 aaKnown RBP eCLIP8.25□□□□□ -1.095e-8■■□□□ 13.4
SND1-205ENST00000467238 DUSP28Q4G0W2 176 aa8.25□□□□□ -1.09
SND1-205ENST00000467238 GPATCH4Q5T3I0 446 aaKnown RBP8.25□□□□□ -1.09
SND1-205ENST00000467238 IQSEC1Q6DN90 963 aa8.25□□□□□ -1.09
SND1-205ENST00000467238 SLC30A10Q6XR72 485 aa8.25□□□□□ -1.09
SND1-205ENST00000467238 KIAA1211Q6ZU35 1233 aa8.25□□□□□ -1.09
SND1-205ENST00000467238 IQCA1Q86XH1 822 aa8.25□□□□□ -1.09
SND1-205ENST00000467238 DGKHQ86XP1 1220 aa8.25□□□□□ -1.09
SND1-205ENST00000467238 ANKS1AQ92625 1134 aa8.25□□□□□ -1.09
SND1-205ENST00000467238 CDX2Q99626 313 aaPredicted RBP8.25□□□□□ -1.09
SND1-205ENST00000467238 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.25□□□□□ -1.09
SND1-205ENST00000467238 ZKSCAN3Q9BRR0 538 aa8.25□□□□□ -1.09
SND1-205ENST00000467238 DSCC1Q9BVC3 393 aa8.25□□□□□ -1.09
SND1-205ENST00000467238 AP5M1Q9H0R1 490 aa8.25□□□□□ -1.09
SND1-205ENST00000467238 SEMA6BQ9H3T3 888 aa8.25□□□□□ -1.09
SND1-205ENST00000467238 Q9Y3F1 56 aa8.25□□□□□ -1.09
SND1-205ENST00000467238 MICAL3Q7RTP6 2002 aa8.24□□□□□ -1.09
SND1-205ENST00000467238 TMEM265A0A087WTH1 108 aa8.24□□□□□ -1.09
SND1-205ENST00000467238 RBM47A0AV96 593 aaKnown RBP8.24□□□□□ -1.09
SND1-205ENST00000467238 B4E1Z4 1266 aa8.24□□□□□ -1.09
SND1-205ENST00000467238 DLL1O00548 723 aa8.24□□□□□ -1.09
SND1-205ENST00000467238 TLR3O15455 904 aaKnown RBP8.24□□□□□ -1.09
SND1-205ENST00000467238 ZEB2O60315 1214 aa8.24□□□□□ -1.09
SND1-205ENST00000467238 GOLGA8HP0CJ92 632 aa8.24□□□□□ -1.09
SND1-205ENST00000467238 CSF2RAP15509 400 aa8.24□□□□□ -1.09
SND1-205ENST00000467238 EDNRBP24530 442 aa8.24□□□□□ -1.09
SND1-205ENST00000467238 CALML3P27482 149 aa8.24□□□□□ -1.09
SND1-205ENST00000467238 ITGA7Q13683 1181 aa8.24□□□□□ -1.09
SND1-205ENST00000467238 CCDC178Q5BJE1 867 aa8.24□□□□□ -1.09
SND1-205ENST00000467238 TMEM240Q5SV17 173 aa8.24□□□□□ -1.09
SND1-205ENST00000467238 RASIP1Q5U651 963 aa8.24□□□□□ -1.09
SND1-205ENST00000467238 RNF207Q6ZRF8 634 aa8.24□□□□□ -1.09
SND1-205ENST00000467238 C16orf59Q7L2K0 433 aa8.24□□□□□ -1.09
SND1-205ENST00000467238 PNMA1Q8ND90 353 aa8.24□□□□□ -1.09
SND1-205ENST00000467238 SEZ6LQ9BYH1 1024 aa8.24□□□□□ -1.09
SND1-205ENST00000467238 WDR11Q9BZH6 1224 aa8.24□□□□□ -1.09
SND1-205ENST00000467238 PPP1R12CQ9BZL4 782 aa8.24□□□□□ -1.09
SND1-205ENST00000467238 IL25Q9H293 177 aa8.24□□□□□ -1.09
SND1-205ENST00000467238 CPVLQ9H3G5 476 aa8.24□□□□□ -1.09
SND1-205ENST00000467238 PRM3Q9NNZ6 103 aa8.24□□□□□ -1.09
SND1-205ENST00000467238 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.23□□□□□ -1.09
SND1-205ENST00000467238 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.23□□□□□ -1.09
SND1-205ENST00000467238 B4GALT4O60513 344 aa8.23□□□□□ -1.09
SND1-205ENST00000467238 CYP2C18P33260 490 aa8.23□□□□□ -1.09
SND1-205ENST00000467238 PURAQ00577 322 aaKnown RBP8.23□□□□□ -1.09
SND1-205ENST00000467238 CDC37Q16543 378 aaPredicted RBP8.23□□□□□ -1.09
SND1-205ENST00000467238 IMMTQ16891 758 aaKnown RBP8.23□□□□□ -1.09
SND1-205ENST00000467238 USH1GQ495M9 461 aa8.23□□□□□ -1.09
SND1-205ENST00000467238 PSRC1Q6PGN9 363 aaPredicted RBP8.23□□□□□ -1.09
SND1-205ENST00000467238 TMEM199Q8N511 208 aa8.23□□□□□ -1.09
SND1-205ENST00000467238 ENAHQ8N8S7 591 aaPredicted RBP8.23□□□□□ -1.09
SND1-205ENST00000467238 RGS22Q8NE09 1264 aa8.23□□□□□ -1.09
SND1-205ENST00000467238 DNERQ8NFT8 737 aa8.23□□□□□ -1.09
SND1-205ENST00000467238 ZSCAN10Q96SZ4 725 aaPredicted RBP8.23□□□□□ -1.09
SND1-205ENST00000467238 UBA5Q9GZZ9 404 aa8.23□□□□□ -1.09
SND1-205ENST00000467238 ZSWIM5Q9P217 1185 aa8.23□□□□□ -1.09
SND1-205ENST00000467238 TNKSO95271 1327 aa8.23□□□□□ -1.09
SND1-205ENST00000467238 UMODL1Q5DID0 1318 aa8.23□□□□□ -1.09
SND1-205ENST00000467238 LOXHD1Q8IVV2 1947 aa8.23□□□□□ -1.09
SND1-205ENST00000467238 NKRFO15226 690 aaKnown RBP eCLIP8.22□□□□□ -1.09
SND1-205ENST00000467238 ACRP10323 421 aa8.22□□□□□ -1.09
SND1-205ENST00000467238 GSPT1P15170 499 aaKnown RBP8.22□□□□□ -1.09
SND1-205ENST00000467238 ITGB7P26010 798 aa8.22□□□□□ -1.09
SND1-205ENST00000467238 CPT1AP50416 773 aa8.22□□□□□ -1.09
SND1-205ENST00000467238 PSMC6P62333 389 aa8.22□□□□□ -1.09
SND1-205ENST00000467238 RELBQ01201 579 aa8.22□□□□□ -1.09
SND1-205ENST00000467238 PPP2R5BQ15173 497 aa8.22□□□□□ -1.09
SND1-205ENST00000467238 ASPRV1Q53RT3 343 aa8.22□□□□□ -1.09
SND1-205ENST00000467238 TTC22Q5TAA0 569 aa8.22□□□□□ -1.09
SND1-205ENST00000467238 ZNF365Q70YC5 407 aa8.22□□□□□ -1.09
SND1-205ENST00000467238 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms