RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 CLUL1Q15846 466 aa5.46□□□□□ -1.54
VPS13A-209ENST00000467124 SLC14A2Q15849 920 aa5.46□□□□□ -1.54
VPS13A-209ENST00000467124 CYP4F22Q6NT55 531 aa5.46□□□□□ -1.54
VPS13A-209ENST00000467124 OTOP3Q7RTS5 596 aa5.46□□□□□ -1.54
VPS13A-209ENST00000467124 CABP7Q86V35 215 aa5.46□□□□□ -1.54
VPS13A-209ENST00000467124 TPH2Q8IWU9 490 aa5.46□□□□□ -1.54
VPS13A-209ENST00000467124 SIRT2Q8IXJ6 389 aa5.46□□□□□ -1.54
VPS13A-209ENST00000467124 MYO1HQ8N1T3 1032 aa5.46□□□□□ -1.54
VPS13A-209ENST00000467124 NUP43Q8NFH3 380 aa5.46□□□□□ -1.54
VPS13A-209ENST00000467124 JPH3Q8WXH2 748 aaPredicted RBP5.46□□□□□ -1.54
VPS13A-209ENST00000467124 CCDC136Q96JN2 1154 aa5.46□□□□□ -1.54
VPS13A-209ENST00000467124 MTA3Q9BTC8 594 aa5.46□□□□□ -1.54
VPS13A-209ENST00000467124 EPB41L1Q9H4G0 881 aa5.46□□□□□ -1.54
VPS13A-209ENST00000467124 PCIF1Q9H4Z3 704 aa5.46□□□□□ -1.54
VPS13A-209ENST00000467124 C19orf44Q9H6X5 657 aa5.46□□□□□ -1.54
VPS13A-209ENST00000467124 SP110Q9HB58 689 aa5.46□□□□□ -1.54
VPS13A-209ENST00000467124 ACSL6Q9UKU0 697 aa5.46□□□□□ -1.54
VPS13A-209ENST00000467124 NUB1Q9Y5A7 615 aa5.46□□□□□ -1.54
VPS13A-209ENST00000467124 X6R8D5 127 aa5.46□□□□□ -1.54
VPS13A-209ENST00000467124 CCDC194A0A1B0GVG4 234 aa5.45□□□□□ -1.54
VPS13A-209ENST00000467124 GOLGA8AA7E2F4 631 aa5.45□□□□□ -1.54
VPS13A-209ENST00000467124 GOLGA8BA8MQT2 603 aa5.45□□□□□ -1.54
VPS13A-209ENST00000467124 ULK1O75385 1050 aa5.45□□□□□ -1.54
VPS13A-209ENST00000467124 WNT11O96014 354 aa5.45□□□□□ -1.54
VPS13A-209ENST00000467124 HPXP02790 462 aa5.45□□□□□ -1.54
VPS13A-209ENST00000467124 PRKCAP17252 672 aa5.45□□□□□ -1.54
VPS13A-209ENST00000467124 KLF1Q13351 362 aaPredicted RBP5.45□□□□□ -1.54
VPS13A-209ENST00000467124 LRP8Q14114 963 aa5.45□□□□□ -1.54
VPS13A-209ENST00000467124 ODF1Q14990 250 aa5.45□□□□□ -1.54
VPS13A-209ENST00000467124 CHRNA2Q15822 529 aa5.45□□□□□ -1.54
VPS13A-209ENST00000467124 ARHGAP44Q17R89 818 aa5.45□□□□□ -1.54
VPS13A-209ENST00000467124 NFXL1Q6ZNB6 911 aa5.45□□□□□ -1.54
VPS13A-209ENST00000467124 OTOP1Q7RTM1 612 aa5.45□□□□□ -1.54
VPS13A-209ENST00000467124 PNMA8AQ86V59 439 aaPredicted RBP5.45□□□□□ -1.54
VPS13A-209ENST00000467124 NOSTRINQ8IVI9 506 aa5.45□□□□□ -1.54
VPS13A-209ENST00000467124 EFHBQ8N7U6 833 aa5.45□□□□□ -1.54
VPS13A-209ENST00000467124 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.45□□□□□ -1.54
VPS13A-209ENST00000467124 ERCC4Q92889 916 aaPredicted RBP5.45□□□□□ -1.54
VPS13A-209ENST00000467124 LRGUKQ96M69 825 aa5.45□□□□□ -1.54
VPS13A-209ENST00000467124 CDH19Q9H159 772 aa5.45□□□□□ -1.54
VPS13A-209ENST00000467124 LUC7LQ9NQ29 371 aaKnown RBP5.45□□□□□ -1.54
VPS13A-209ENST00000467124 PDLIM7Q9NR12 457 aa5.45□□□□□ -1.54
VPS13A-209ENST00000467124 DSEQ9UL01 958 aa5.45□□□□□ -1.54
VPS13A-209ENST00000467124 SRPK3Q9UPE1 567 aa5.45□□□□□ -1.54
VPS13A-209ENST00000467124 NOC2LQ9Y3T9 749 aaKnown RBP5.45□□□□□ -1.54
VPS13A-209ENST00000467124 WASHC2AQ641Q2 1341 aa5.45□□□□□ -1.54
VPS13A-209ENST00000467124 A0A1W2PQJ5 194 aa5.44□□□□□ -1.54
VPS13A-209ENST00000467124 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.44□□□□□ -1.54
VPS13A-209ENST00000467124 XPOTO43592 962 aaKnown RBP5.44□□□□□ -1.54
VPS13A-209ENST00000467124 MAFKO60675 156 aa5.44□□□□□ -1.54
VPS13A-209ENST00000467124 HIP1RO75146 1068 aa5.44□□□□□ -1.54
VPS13A-209ENST00000467124 SNUPNO95149 360 aaKnown RBP5.44□□□□□ -1.54
VPS13A-209ENST00000467124 SDHBP21912 280 aa5.44□□□□□ -1.54
VPS13A-209ENST00000467124 SSTR4P31391 388 aa5.44□□□□□ -1.54
VPS13A-209ENST00000467124 SLC6A11P48066 632 aa5.44□□□□□ -1.54
VPS13A-209ENST00000467124 SESN3P58005 492 aa5.44□□□□□ -1.54
VPS13A-209ENST00000467124 GRIN1Q05586 938 aa5.44□□□□□ -1.54
VPS13A-209ENST00000467124 MLC1Q15049 377 aa5.44□□□□□ -1.54
VPS13A-209ENST00000467124 ACAP2Q15057 778 aa5.44□□□□□ -1.54
VPS13A-209ENST00000467124 PLCL1Q15111 1095 aa5.44□□□□□ -1.54
VPS13A-209ENST00000467124 TERF2Q15554 542 aa5.44□□□□□ -1.54
VPS13A-209ENST00000467124 NETO2Q8NC67 525 aa5.44□□□□□ -1.54
VPS13A-209ENST00000467124 RTF1Q92541 710 aaKnown RBP5.44□□□□□ -1.54
VPS13A-209ENST00000467124 SCYL1Q96KG9 808 aa5.44□□□□□ -1.54
VPS13A-209ENST00000467124 C8orf48Q96LL4 319 aa5.44□□□□□ -1.54
VPS13A-209ENST00000467124 RHOBTB2Q9BYZ6 727 aa5.44□□□□□ -1.54
VPS13A-209ENST00000467124 PCMTD2Q9NV79 361 aa5.44□□□□□ -1.54
VPS13A-209ENST00000467124 RIC8BQ9NVN3 520 aa5.44□□□□□ -1.54
VPS13A-209ENST00000467124 MKS1Q9NXB0 559 aa5.44□□□□□ -1.54
VPS13A-209ENST00000467124 TELO2Q9Y4R8 837 aa5.44□□□□□ -1.54
VPS13A-209ENST00000467124 NOTOA8MTQ0 251 aa5.43□□□□□ -1.54
VPS13A-209ENST00000467124 FZD9O00144 591 aa5.43□□□□□ -1.54
VPS13A-209ENST00000467124 SRGAP3O43295 1099 aa5.43□□□□□ -1.54
VPS13A-209ENST00000467124 PCDHGA12O60330 932 aa5.43□□□□□ -1.54
VPS13A-209ENST00000467124 KDM1AO60341 852 aa5.43□□□□□ -1.54
VPS13A-209ENST00000467124 PSPNO60542 156 aa5.43□□□□□ -1.54
VPS13A-209ENST00000467124 ADAM23O75077 832 aa5.43□□□□□ -1.54
VPS13A-209ENST00000467124 MED26O95402 600 aa5.43□□□□□ -1.54
VPS13A-209ENST00000467124 CLEC2LP0C7M8 214 aa5.43□□□□□ -1.54
VPS13A-209ENST00000467124 PF4V1P10720 104 aa5.43□□□□□ -1.54
VPS13A-209ENST00000467124 ARL4AP40617 200 aa5.43□□□□□ -1.54
VPS13A-209ENST00000467124 PDCD1Q15116 288 aa5.43□□□□□ -1.54
VPS13A-209ENST00000467124 INAVAQ3KP66 663 aa5.43□□□□□ -1.54
VPS13A-209ENST00000467124 TIGD5Q53EQ6 642 aa5.43□□□□□ -1.54
VPS13A-209ENST00000467124 EMC4Q5J8M3 183 aa5.43□□□□□ -1.54
VPS13A-209ENST00000467124 HABP4Q5JVS0 413 aaKnown RBP5.43□□□□□ -1.54
VPS13A-209ENST00000467124 STEAP3Q658P3 488 aa5.43□□□□□ -1.54
VPS13A-209ENST00000467124 BICRALQ6AI39 1079 aa5.43□□□□□ -1.54
VPS13A-209ENST00000467124 ESRP1Q6NXG1 681 aaKnown RBP5.43□□□□□ -1.54
VPS13A-209ENST00000467124 SLC4A10Q6U841 1118 aa5.43□□□□□ -1.54
VPS13A-209ENST00000467124 HHIPL2Q6UWX4 724 aa5.43□□□□□ -1.54
VPS13A-209ENST00000467124 DCP2Q8IU60 420 aaKnown RBP5.43□□□□□ -1.54
VPS13A-209ENST00000467124 C1orf162Q8NEQ5 155 aaPredicted RBP5.43□□□□□ -1.54
VPS13A-209ENST00000467124 FLAD1Q8NFF5 587 aa5.43□□□□□ -1.54
VPS13A-209ENST00000467124 TTC8Q8TAM2 541 aa5.43□□□□□ -1.54
VPS13A-209ENST00000467124 FAXDC2Q96IV6 333 aa5.43□□□□□ -1.54
VPS13A-209ENST00000467124 ZMAT4Q9H898 229 aa5.43□□□□□ -1.54
VPS13A-209ENST00000467124 ZBTB21Q9ULJ3 1066 aa5.43□□□□□ -1.54
VPS13A-209ENST00000467124 EDARQ9UNE0 448 aa5.43□□□□□ -1.54
VPS13A-209ENST00000467124 PCDHGA9Q9Y5G4 932 aaKnown RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms