RNA–Protein interactions for RNA: ENST00000467049.1

PTPDC1-203, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

TSL 2

Gene PTPDC1, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-203ENST00000467049 SEMA3FQ13275 785 aa10.35□□□□□ -0.75
PTPDC1-203ENST00000467049 CTC1Q2NKJ3 1217 aa10.35□□□□□ -0.75
PTPDC1-203ENST00000467049 XRRA1Q6P2D8 792 aa10.35□□□□□ -0.75
PTPDC1-203ENST00000467049 CYB5R4Q7L1T6 521 aa10.35□□□□□ -0.75
PTPDC1-203ENST00000467049 CHD1LQ86WJ1 897 aa10.35□□□□□ -0.75
PTPDC1-203ENST00000467049 SENP7Q9BQF6 1050 aa10.35□□□□□ -0.75
PTPDC1-203ENST00000467049 C11orf84Q9BUA3 381 aaPredicted RBP10.35□□□□□ -0.75
PTPDC1-203ENST00000467049 OSBPL7Q9BZF2 842 aa10.35□□□□□ -0.75
PTPDC1-203ENST00000467049 UPF3BQ9BZI7 483 aaKnown RBP10.35□□□□□ -0.75
PTPDC1-203ENST00000467049 SETD4Q9NVD3 440 aa10.35□□□□□ -0.75
PTPDC1-203ENST00000467049 ADGRA3Q8IWK6 1321 aa10.35□□□□□ -0.75
PTPDC1-203ENST00000467049 LINC00271P0C7V0 271 aa10.34□□□□□ -0.75
PTPDC1-203ENST00000467049 BMPR1AP36894 532 aa10.34□□□□□ -0.75
PTPDC1-203ENST00000467049 ALYREFQ86V81 257 aaKnown RBP10.34□□□□□ -0.75
PTPDC1-203ENST00000467049 HOMER1Q86YM7 354 aa10.34□□□□□ -0.75
PTPDC1-203ENST00000467049 LMBR1Q8WVP7 490 aa10.34□□□□□ -0.75
PTPDC1-203ENST00000467049 ZFP91Q96JP5 570 aaPredicted RBP10.34□□□□□ -0.75
PTPDC1-203ENST00000467049 POP1Q99575 1024 aaKnown RBP10.34□□□□□ -0.75
PTPDC1-203ENST00000467049 RWDD1Q9H446 243 aaPredicted RBP10.34□□□□□ -0.75
PTPDC1-203ENST00000467049 BCAS3Q9H6U6 928 aa10.34□□□□□ -0.75
PTPDC1-203ENST00000467049 RC3H2Q9HBD1 1191 aaKnown RBP10.34□□□□□ -0.75
PTPDC1-203ENST00000467049 CLDND1Q9NY35 253 aa10.34□□□□□ -0.75
PTPDC1-203ENST00000467049 NRCAMQ92823 1304 aa10.34□□□□□ -0.75
PTPDC1-203ENST00000467049 CYTH3O43739 400 aa10.34□□□□□ -0.75
PTPDC1-203ENST00000467049 LTBRP36941 435 aa10.34□□□□□ -0.75
PTPDC1-203ENST00000467049 ARHGAP4P98171 946 aa10.34□□□□□ -0.75
PTPDC1-203ENST00000467049 NUCB1Q02818 461 aa10.34□□□□□ -0.75
PTPDC1-203ENST00000467049 MGAT3Q09327 533 aa10.34□□□□□ -0.75
PTPDC1-203ENST00000467049 SMAD2Q15796 467 aaKnown RBP10.34□□□□□ -0.75
PTPDC1-203ENST00000467049 TAF2Q6P1X5 1199 aa10.34□□□□□ -0.75
PTPDC1-203ENST00000467049 CYFIP1Q7L576 1253 aa10.34□□□□□ -0.75
PTPDC1-203ENST00000467049 GIMAP8Q8ND71 665 aaPredicted RBP10.34□□□□□ -0.75
PTPDC1-203ENST00000467049 CLP1Q92989 425 aaKnown RBP10.34□□□□□ -0.75
PTPDC1-203ENST00000467049 UIMC1Q96RL1 719 aa10.34□□□□□ -0.75
PTPDC1-203ENST00000467049 EHMT1Q9H9B1 1298 aa10.34□□□□□ -0.75
PTPDC1-203ENST00000467049 RBAK-RBAKDNI3L0D1 243 aa10.33□□□□□ -0.76
PTPDC1-203ENST00000467049 CHRNA1P02708 482 aa10.33□□□□□ -0.76
PTPDC1-203ENST00000467049 RPLP2P05387 115 aaKnown RBP10.33□□□□□ -0.76
PTPDC1-203ENST00000467049 HYAL1Q12794 435 aa10.33□□□□□ -0.76
PTPDC1-203ENST00000467049 TRDNQ13061 729 aa10.33□□□□□ -0.76
PTPDC1-203ENST00000467049 SMAD4Q13485 552 aaKnown RBP10.33□□□□□ -0.76
PTPDC1-203ENST00000467049 UTP14CQ5TAP6 766 aaKnown RBP10.33□□□□□ -0.76
PTPDC1-203ENST00000467049 PCNX4Q63HM2 1172 aa10.33□□□□□ -0.76
PTPDC1-203ENST00000467049 EP400NLQ6ZTU2 488 aa10.33□□□□□ -0.76
PTPDC1-203ENST00000467049 NLRX1Q86UT6 975 aa10.33□□□□□ -0.76
PTPDC1-203ENST00000467049 TRIM50Q86XT4 487 aa10.33□□□□□ -0.76
PTPDC1-203ENST00000467049 PLVAPQ9BX97 442 aa10.33□□□□□ -0.76
PTPDC1-203ENST00000467049 ERICH2A1L162 156 aa10.32□□□□□ -0.76
PTPDC1-203ENST00000467049 PIK3CDO00329 1044 aa10.32□□□□□ -0.76
PTPDC1-203ENST00000467049 IFIT3O14879 490 aaKnown RBP10.32□□□□□ -0.76
PTPDC1-203ENST00000467049 GRM6O15303 877 aa10.32□□□□□ -0.76
PTPDC1-203ENST00000467049 MBTPS2O43462 519 aa10.32□□□□□ -0.76
PTPDC1-203ENST00000467049 MMP1P03956 469 aa10.32□□□□□ -0.76
PTPDC1-203ENST00000467049 IRS1P35568 1242 aa10.32□□□□□ -0.76
PTPDC1-203ENST00000467049 MRE11P49959 708 aa10.32□□□□□ -0.76
PTPDC1-203ENST00000467049 NHLH1Q02575 133 aa10.32□□□□□ -0.76
PTPDC1-203ENST00000467049 TROAPQ12815 778 aa10.32□□□□□ -0.76
PTPDC1-203ENST00000467049 LPIN1Q14693 890 aa10.32□□□□□ -0.76
PTPDC1-203ENST00000467049 B4GALNT3Q6L9W6 998 aa10.32□□□□□ -0.76
PTPDC1-203ENST00000467049 RSPH3Q86UC2 560 aa10.32□□□□□ -0.76
PTPDC1-203ENST00000467049 ZNF689Q96CS4 500 aaPredicted RBP10.32□□□□□ -0.76
PTPDC1-203ENST00000467049 XIRP2A4UGR9 3374 aa10.32□□□□□ -0.76
PTPDC1-203ENST00000467049 PIEZO1Q92508 2521 aa10.32□□□□□ -0.76
PTPDC1-203ENST00000467049 PLXNA4Q9HCM2 1894 aa10.32□□□□□ -0.76
PTPDC1-203ENST00000467049 ENPP3O14638 875 aa10.32□□□□□ -0.76
PTPDC1-203ENST00000467049 GHRP10912 638 aa10.32□□□□□ -0.76
PTPDC1-203ENST00000467049 WTAPQ15007 396 aa10.32□□□□□ -0.76
PTPDC1-203ENST00000467049 NAALADL2Q58DX5 795 aa10.32□□□□□ -0.76
PTPDC1-203ENST00000467049 HERC4Q5GLZ8 1057 aaPredicted RBP10.32□□□□□ -0.76
PTPDC1-203ENST00000467049 RUFY4Q6ZNE9 571 aa10.32□□□□□ -0.76
PTPDC1-203ENST00000467049 CUL5Q93034 780 aa10.32□□□□□ -0.76
PTPDC1-203ENST00000467049 P2RX5Q93086 422 aa10.32□□□□□ -0.76
PTPDC1-203ENST00000467049 GPRASP2Q96D09 838 aa10.32□□□□□ -0.76
PTPDC1-203ENST00000467049 FBXL18Q96ME1 805 aa10.32□□□□□ -0.76
PTPDC1-203ENST00000467049 MAP3K14Q99558 947 aa10.32□□□□□ -0.76
PTPDC1-203ENST00000467049 SPZ1Q9BXG8 430 aa10.32□□□□□ -0.76
PTPDC1-203ENST00000467049 RTEL1Q9NZ71 1219 aa10.32□□□□□ -0.76
PTPDC1-203ENST00000467049 CD207Q9UJ71 328 aa10.32□□□□□ -0.76
PTPDC1-203ENST00000467049 U3KPZ7 1027 aaPredicted RBP10.32□□□□□ -0.76
PTPDC1-203ENST00000467049 TECTAO75443 2155 aa10.31□□□□□ -0.76
PTPDC1-203ENST00000467049 FNDC1Q4ZHG4 1894 aaPredicted RBP10.31□□□□□ -0.76
PTPDC1-203ENST00000467049 KMT2EQ8IZD2 1858 aa10.31□□□□□ -0.76
PTPDC1-203ENST00000467049 MBLAC1A4D2B0 266 aaPredicted RBP10.31□□□□□ -0.76
PTPDC1-203ENST00000467049 TBX10O75333 385 aa10.31□□□□□ -0.76
PTPDC1-203ENST00000467049 SMARCA1P28370 1054 aa10.31□□□□□ -0.76
PTPDC1-203ENST00000467049 PPFIA1Q13136 1202 aa10.31□□□□□ -0.76
PTPDC1-203ENST00000467049 BTG3Q14201 252 aaPredicted RBP10.31□□□□□ -0.76
PTPDC1-203ENST00000467049 SART3Q15020 963 aaKnown RBP10.31□□□□□ -0.76
PTPDC1-203ENST00000467049 FBXO47Q5MNV8 452 aa10.31□□□□□ -0.76
PTPDC1-203ENST00000467049 TSHZ1Q6ZSZ6 1077 aa10.31□□□□□ -0.76
PTPDC1-203ENST00000467049 CMTR2Q8IYT2 770 aaKnown RBP10.31□□□□□ -0.76
PTPDC1-203ENST00000467049 SMARCC2Q8TAQ2 1214 aa10.31□□□□□ -0.76
PTPDC1-203ENST00000467049 PPP2R3CQ969Q6 453 aa10.31□□□□□ -0.76
PTPDC1-203ENST00000467049 CDHR1Q96JP9 859 aa10.31□□□□□ -0.76
PTPDC1-203ENST00000467049 MFSD14AQ96MC6 490 aa10.31□□□□□ -0.76
PTPDC1-203ENST00000467049 IL25Q9H293 177 aa10.31□□□□□ -0.76
PTPDC1-203ENST00000467049 TELO2Q9Y4R8 837 aa10.31□□□□□ -0.76
PTPDC1-203ENST00000467049 SQORQ9Y6N5 450 aa10.31□□□□□ -0.76
PTPDC1-203ENST00000467049 DGKIO75912 1065 aa10.3□□□□□ -0.76
PTPDC1-203ENST00000467049 TCF7P36402 384 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms