RNA–Protein interactions for RNA: ENST00000466776.5

GTF3A-205, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-205ENST00000466776 TAF2Q6P1X5 1199 aa13.75□□□□□ -0.21
GTF3A-205ENST00000466776 MAP4K1Q92918 833 aa13.75□□□□□ -0.21
GTF3A-205ENST00000466776 UBE2ZQ9H832 354 aaPredicted RBP13.75□□□□□ -0.21
GTF3A-205ENST00000466776 EHMT1Q9H9B1 1298 aa13.75□□□□□ -0.21
GTF3A-205ENST00000466776 SENP2Q9HC62 589 aa13.75□□□□□ -0.21
GTF3A-205ENST00000466776 SETD4Q9NVD3 440 aa13.75□□□□□ -0.21
GTF3A-205ENST00000466776 RBM8AQ9Y5S9 174 aaKnown RBP13.75□□□□□ -0.21
GTF3A-205ENST00000466776 RPLP2P05387 115 aaKnown RBP13.74□□□□□ -0.21
GTF3A-205ENST00000466776 ANTXR2P58335 489 aa13.74□□□□□ -0.21
GTF3A-205ENST00000466776 USP17L6PQ6QN14 398 aa13.74□□□□□ -0.21
GTF3A-205ENST00000466776 TOP1MTQ969P6 601 aa13.74□□□□□ -0.21
GTF3A-205ENST00000466776 GPRASP2Q96D09 838 aa13.74□□□□□ -0.21
GTF3A-205ENST00000466776 MRPL38Q96DV4 380 aaKnown RBP13.74□□□□□ -0.21
GTF3A-205ENST00000466776 C17orf80Q9BSJ5 609 aa13.74□□□□□ -0.21
GTF3A-205ENST00000466776 IFIH1Q9BYX4 1025 aaKnown RBP13.74□□□□□ -0.21
GTF3A-205ENST00000466776 PSTPIP2Q9H939 334 aa13.74□□□□□ -0.21
GTF3A-205ENST00000466776 LY9Q9HBG7 655 aa13.74□□□□□ -0.21
GTF3A-205ENST00000466776 HCN4Q9Y3Q4 1203 aa13.74□□□□□ -0.21
GTF3A-205ENST00000466776 TTC3P53804 2025 aa13.73□□□□□ -0.21
GTF3A-205ENST00000466776 SPDYE3A6NKU9 549 aa13.73□□□□□ -0.21
GTF3A-205ENST00000466776 MEIS2O14770 477 aa13.73□□□□□ -0.21
GTF3A-205ENST00000466776 PRC1O43663 620 aa13.73□□□□□ -0.21
GTF3A-205ENST00000466776 UPP2O95045 317 aa13.73□□□□□ -0.21
GTF3A-205ENST00000466776 TCF7P36402 384 aaPredicted RBP13.73□□□□□ -0.21
GTF3A-205ENST00000466776 SEMA3FQ13275 785 aa13.73□□□□□ -0.21
GTF3A-205ENST00000466776 MKRN4PQ13434 485 aaPredicted RBP13.73□□□□□ -0.21
GTF3A-205ENST00000466776 PUS10Q3MIT2 529 aaKnown RBP13.73□□□□□ -0.21
GTF3A-205ENST00000466776 EPC2Q52LR7 807 aa13.73□□□□□ -0.21
GTF3A-205ENST00000466776 FAM26DQ5JW98 314 aa13.73□□□□□ -0.21
GTF3A-205ENST00000466776 TRIM50Q86XT4 487 aa13.73□□□□□ -0.21
GTF3A-205ENST00000466776 LMBR1Q8WVP7 490 aa13.73□□□□□ -0.21
GTF3A-205ENST00000466776 TNPO1Q92973 898 aaKnown RBP13.73□□□□□ -0.21
GTF3A-205ENST00000466776 MYL10Q9BUA6 226 aa13.73□□□□□ -0.21
GTF3A-205ENST00000466776 ERAP1Q9NZ08 941 aa13.73□□□□□ -0.21
GTF3A-205ENST00000466776 RWDD3Q9Y3V2 267 aa13.73□□□□□ -0.21
GTF3A-205ENST00000466776 SUPT16HQ9Y5B9 1047 aaKnown RBP13.73□□□□□ -0.21
GTF3A-205ENST00000466776 MYH9P35579 1960 aaKnown RBP13.72□□□□□ -0.21
GTF3A-205ENST00000466776 ATG2AQ2TAZ0 1938 aa13.72□□□□□ -0.21
GTF3A-205ENST00000466776 MAFGO15525 162 aa13.72□□□□□ -0.21
GTF3A-205ENST00000466776 KCNA5P22460 613 aa13.72□□□□□ -0.21
GTF3A-205ENST00000466776 PPFIA1Q13136 1202 aa13.72□□□□□ -0.21
GTF3A-205ENST00000466776 GPM6BQ13491 265 aa13.72□□□□□ -0.21
GTF3A-205ENST00000466776 MTMR1Q13613 665 aa13.72□□□□□ -0.21
GTF3A-205ENST00000466776 LEXMQ3ZCV2 418 aa13.72□□□□□ -0.21
GTF3A-205ENST00000466776 TMEM31Q5JXX7 168 aa13.72□□□□□ -0.21
GTF3A-205ENST00000466776 SYNE3Q6ZMZ3 975 aa13.72□□□□□ -0.21
GTF3A-205ENST00000466776 RPAINQ86UA6 219 aa13.72□□□□□ -0.21
GTF3A-205ENST00000466776 SEPT1Q8WYJ6 367 aa13.72□□□□□ -0.21
GTF3A-205ENST00000466776 GLG1Q92896 1179 aa13.72□□□□□ -0.21
GTF3A-205ENST00000466776 FAM122AQ96E09 287 aa13.72□□□□□ -0.21
GTF3A-205ENST00000466776 BCAS3Q9H6U6 928 aa13.72□□□□□ -0.21
GTF3A-205ENST00000466776 FAM50BQ9Y247 325 aa13.72□□□□□ -0.21
GTF3A-205ENST00000466776 SLC12A7Q9Y666 1083 aa13.72□□□□□ -0.21
GTF3A-205ENST00000466776 TAF6LQ9Y6J9 622 aa13.72□□□□□ -0.21
GTF3A-205ENST00000466776 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.71□□□□□ -0.21
GTF3A-205ENST00000466776 H3BNC9 293 aa13.71□□□□□ -0.21
GTF3A-205ENST00000466776 SH2B2O14492 632 aaPredicted RBP13.71□□□□□ -0.21
GTF3A-205ENST00000466776 PLA2G5P39877 138 aa13.71□□□□□ -0.21
GTF3A-205ENST00000466776 LIFRP42702 1097 aa13.71□□□□□ -0.21
GTF3A-205ENST00000466776 ADAM17P78536 824 aa13.71□□□□□ -0.21
GTF3A-205ENST00000466776 TMEM192Q8IY95 271 aa13.71□□□□□ -0.21
GTF3A-205ENST00000466776 FIBCD1Q8N539 461 aa13.71□□□□□ -0.21
GTF3A-205ENST00000466776 BANK1Q8NDB2 785 aa13.71□□□□□ -0.21
GTF3A-205ENST00000466776 IL17RAQ96F46 866 aa13.71□□□□□ -0.21
GTF3A-205ENST00000466776 SMARCAD1Q9H4L7 1026 aa13.71□□□□□ -0.21
GTF3A-205ENST00000466776 TUBE1Q9UJT0 475 aa13.71□□□□□ -0.21
GTF3A-205ENST00000466776 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.7□□□□□ -0.22
GTF3A-205ENST00000466776 M0QZ92 97 aa13.7□□□□□ -0.22
GTF3A-205ENST00000466776 PLEKHA8P1O95397 391 aa13.7□□□□□ -0.22
GTF3A-205ENST00000466776 KCNA2P16389 499 aa13.7□□□□□ -0.22
GTF3A-205ENST00000466776 SSTR3P32745 418 aaPredicted RBP13.7□□□□□ -0.22
GTF3A-205ENST00000466776 GRIK4Q16099 956 aa13.7□□□□□ -0.22
GTF3A-205ENST00000466776 TEX2Q8IWB9 1127 aa13.7□□□□□ -0.22
GTF3A-205ENST00000466776 SRBD1Q8N5C6 995 aaKnown RBP13.7□□□□□ -0.22
GTF3A-205ENST00000466776 LMAN2LQ9H0V9 348 aa13.7□□□□□ -0.22
GTF3A-205ENST00000466776 NSUN3Q9H649 340 aaKnown RBP13.7□□□□□ -0.22
GTF3A-205ENST00000466776 EPHX3Q9H6B9 360 aa13.7□□□□□ -0.22
GTF3A-205ENST00000466776 AZI2Q9H6S1 392 aa13.7□□□□□ -0.22
GTF3A-205ENST00000466776 ARIH1Q9Y4X5 557 aaPredicted RBP13.7□□□□□ -0.22
GTF3A-205ENST00000466776 MYO7AQ13402 2215 aa13.7□□□□□ -0.22
GTF3A-205ENST00000466776 EVPLQ92817 2033 aa13.69□□□□□ -0.22
GTF3A-205ENST00000466776 KIAA1671Q9BY89 1806 aa13.69□□□□□ -0.22
GTF3A-205ENST00000466776 RRN3P2A6NIE6 340 aa13.69□□□□□ -0.22
GTF3A-205ENST00000466776 NCK2O43639 380 aa13.69□□□□□ -0.22
GTF3A-205ENST00000466776 RB1P06400 928 aa13.69□□□□□ -0.22
GTF3A-205ENST00000466776 GHRP10912 638 aa13.69□□□□□ -0.22
GTF3A-205ENST00000466776 MARK3P27448 753 aa13.69□□□□□ -0.22
GTF3A-205ENST00000466776 CTNNB1P35222 781 aa13.69□□□□□ -0.22
GTF3A-205ENST00000466776 RNF20Q5VTR2 975 aa13.69□□□□□ -0.22
GTF3A-205ENST00000466776 PTCRAQ6ISU1 281 aaPredicted RBP13.69□□□□□ -0.22
GTF3A-205ENST00000466776 EP400NLQ6ZTU2 488 aa13.69□□□□□ -0.22
GTF3A-205ENST00000466776 HEATR3Q7Z4Q2 680 aa13.69□□□□□ -0.22
GTF3A-205ENST00000466776 SDF4Q9BRK5 362 aa13.69□□□□□ -0.22
GTF3A-205ENST00000466776 C11orf84Q9BUA3 381 aaPredicted RBP13.69□□□□□ -0.22
GTF3A-205ENST00000466776 JPH1Q9HDC5 661 aaPredicted RBP13.69□□□□□ -0.22
GTF3A-205ENST00000466776 RBM28Q9NW13 759 aaKnown RBP13.69□□□□□ -0.22
GTF3A-205ENST00000466776 RAPGEFL1Q9UHV5 662 aa13.69□□□□□ -0.22
GTF3A-205ENST00000466776 ADGRA3Q8IWK6 1321 aa13.68□□□□□ -0.22
GTF3A-205ENST00000466776 SLC27A2O14975 620 aa13.68□□□□□ -0.22
GTF3A-205ENST00000466776 ATP9AO75110 1047 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms