RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 GSTA4O15217 222 aa5.87□□□□□ -1.47
VPS13D-203ENST00000466732 KCNQ2O43526 872 aa5.87□□□□□ -1.47
VPS13D-203ENST00000466732 CKMP06732 381 aa5.87□□□□□ -1.47
VPS13D-203ENST00000466732 KRT15P19012 456 aa5.87□□□□□ -1.47
VPS13D-203ENST00000466732 DNM2P50570 870 aa5.87□□□□□ -1.47
VPS13D-203ENST00000466732 JAM2P57087 298 aa5.87□□□□□ -1.47
VPS13D-203ENST00000466732 CRY1Q16526 586 aa5.87□□□□□ -1.47
VPS13D-203ENST00000466732 FAM47CQ5HY64 1035 aa5.87□□□□□ -1.47
VPS13D-203ENST00000466732 NT5DC1Q5TFE4 455 aa5.87□□□□□ -1.47
VPS13D-203ENST00000466732 BRAPQ7Z569 592 aa5.87□□□□□ -1.47
VPS13D-203ENST00000466732 FGD2Q7Z6J4 655 aa5.87□□□□□ -1.47
VPS13D-203ENST00000466732 OSTM1Q86WC4 334 aa5.87□□□□□ -1.47
VPS13D-203ENST00000466732 ZNF761Q86XN6 746 aaPredicted RBP5.87□□□□□ -1.47
VPS13D-203ENST00000466732 NLGN4XQ8N0W4 816 aa5.87□□□□□ -1.47
VPS13D-203ENST00000466732 ADAMTS17Q8TE56 1095 aa5.87□□□□□ -1.47
VPS13D-203ENST00000466732 CLIC6Q96NY7 704 aa5.87□□□□□ -1.47
VPS13D-203ENST00000466732 TRIM39Q9HCM9 518 aa5.87□□□□□ -1.47
VPS13D-203ENST00000466732 SRPK3Q9UPE1 567 aa5.87□□□□□ -1.47
VPS13D-203ENST00000466732 ZNF561-AS1K7EIQ3 104 aa5.86□□□□□ -1.47
VPS13D-203ENST00000466732 ACOT7O00154 380 aa5.86□□□□□ -1.47
VPS13D-203ENST00000466732 MAN2B1O00754 1011 aa5.86□□□□□ -1.47
VPS13D-203ENST00000466732 RAPGEF3O95398 923 aa5.86□□□□□ -1.47
VPS13D-203ENST00000466732 APPP05067 770 aa5.86□□□□□ -1.47
VPS13D-203ENST00000466732 CTSWP56202 376 aa5.86□□□□□ -1.47
VPS13D-203ENST00000466732 RTP5Q14D33 572 aa5.86□□□□□ -1.47
VPS13D-203ENST00000466732 BTBD8Q5XKL5 378 aa5.86□□□□□ -1.47
VPS13D-203ENST00000466732 VASNQ6EMK4 673 aa5.86□□□□□ -1.47
VPS13D-203ENST00000466732 PTRH1Q86Y79 214 aaKnown RBP5.86□□□□□ -1.47
VPS13D-203ENST00000466732 CROTQ9UKG9 612 aa5.86□□□□□ -1.47
VPS13D-203ENST00000466732 TCRBV16S1A1N1A0A5B0 115 aa5.85□□□□□ -1.47
VPS13D-203ENST00000466732 FAM90A27PA6NNH2 459 aa5.85□□□□□ -1.47
VPS13D-203ENST00000466732 DDX3XO00571 662 aaKnown RBP eCLIP5.85□□□□□ -1.47
VPS13D-203ENST00000466732 NOBOXO60393 691 aa5.85□□□□□ -1.47
VPS13D-203ENST00000466732 ZNF28P17035 718 aa5.85□□□□□ -1.47
VPS13D-203ENST00000466732 KCNA6P17658 529 aa5.85□□□□□ -1.47
VPS13D-203ENST00000466732 LACTBP83111 547 aaPredicted RBP5.85□□□□□ -1.47
VPS13D-203ENST00000466732 FIGNQ5HY92 759 aa5.85□□□□□ -1.47
VPS13D-203ENST00000466732 CD276Q5ZPR3 534 aa5.85□□□□□ -1.47
VPS13D-203ENST00000466732 LILRA6Q6PI73 481 aa5.85□□□□□ -1.47
VPS13D-203ENST00000466732 CISD2Q8N5K1 135 aaKnown RBP5.85□□□□□ -1.47
VPS13D-203ENST00000466732 DTX3Q8N9I9 347 aa5.85□□□□□ -1.47
VPS13D-203ENST00000466732 CLUHP3Q96NS8 147 aa5.85□□□□□ -1.47
VPS13D-203ENST00000466732 SMURF1Q9HCE7 757 aa5.85□□□□□ -1.47
VPS13D-203ENST00000466732 DLL4Q9NR61 685 aa5.85□□□□□ -1.47
VPS13D-203ENST00000466732 USP40Q9NVE5 1235 aa5.85□□□□□ -1.47
VPS13D-203ENST00000466732 TMEM260Q9NX78 707 aa5.85□□□□□ -1.47
VPS13D-203ENST00000466732 COQ6Q9Y2Z9 468 aa5.85□□□□□ -1.47
VPS13D-203ENST00000466732 ATP23Q9Y6H3 246 aa5.85□□□□□ -1.47
VPS13D-203ENST00000466732 KCNK3O14649 394 aa5.84□□□□□ -1.47
VPS13D-203ENST00000466732 PTPN1P18031 435 aaKnown RBP5.84□□□□□ -1.47
VPS13D-203ENST00000466732 IL13P35225 146 aa5.84□□□□□ -1.47
VPS13D-203ENST00000466732 MLLT6P55198 1093 aaPredicted RBP5.84□□□□□ -1.47
VPS13D-203ENST00000466732 GJA9P57773 515 aa5.84□□□□□ -1.47
VPS13D-203ENST00000466732 FNDC3BQ53EP0 1204 aaKnown RBP5.84□□□□□ -1.47
VPS13D-203ENST00000466732 FAM26FQ5R3K3 315 aa5.84□□□□□ -1.47
VPS13D-203ENST00000466732 PHF19Q5T6S3 580 aa5.84□□□□□ -1.47
VPS13D-203ENST00000466732 PRAMEF18Q5VWM3 479 aa5.84□□□□□ -1.47
VPS13D-203ENST00000466732 MCTP2Q6DN12 878 aa5.84□□□□□ -1.47
VPS13D-203ENST00000466732 ABHD17CQ6PCB6 329 aa5.84□□□□□ -1.47
VPS13D-203ENST00000466732 EP400NLQ6ZTU2 488 aa5.84□□□□□ -1.47
VPS13D-203ENST00000466732 FRMD5Q7Z6J6 570 aa5.84□□□□□ -1.47
VPS13D-203ENST00000466732 RNPC3Q96LT9 517 aaKnown RBP5.84□□□□□ -1.47
VPS13D-203ENST00000466732 WRNIP1Q96S55 665 aa5.84□□□□□ -1.47
VPS13D-203ENST00000466732 CELF4Q9BZC1 486 aaKnown RBP5.84□□□□□ -1.47
VPS13D-203ENST00000466732 ADAM7Q9H2U9 754 aa5.84□□□□□ -1.47
VPS13D-203ENST00000466732 RIC8BQ9NVN3 520 aa5.84□□□□□ -1.47
VPS13D-203ENST00000466732 RTEL1Q9NZ71 1219 aa5.84□□□□□ -1.47
VPS13D-203ENST00000466732 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.83□□□□□ -1.48
VPS13D-203ENST00000466732 ESYT3A0FGR9 886 aa5.83□□□□□ -1.48
VPS13D-203ENST00000466732 PPP1R12AO14974 1030 aaPredicted RBP5.83□□□□□ -1.48
VPS13D-203ENST00000466732 CYP7B1O75881 506 aa5.83□□□□□ -1.48
VPS13D-203ENST00000466732 ENO2P09104 434 aaPredicted RBP5.83□□□□□ -1.48
VPS13D-203ENST00000466732 PFKPQ01813 784 aa5.83□□□□□ -1.48
VPS13D-203ENST00000466732 NFIXQ14938 502 aa5.83□□□□□ -1.48
VPS13D-203ENST00000466732 SKIDA1Q1XH10 827 aa5.83□□□□□ -1.48
VPS13D-203ENST00000466732 RGL3Q3MIN7 710 aa5.83□□□□□ -1.48
VPS13D-203ENST00000466732 HHIPL2Q6UWX4 724 aa5.83□□□□□ -1.48
VPS13D-203ENST00000466732 OVCH1Q7RTY7 1134 aa5.83□□□□□ -1.48
VPS13D-203ENST00000466732 TXNDC5Q8NBS9 432 aaKnown RBP5.83□□□□□ -1.48
VPS13D-203ENST00000466732 ZCCHC14Q8WYQ9 949 aaKnown RBP5.83□□□□□ -1.48
VPS13D-203ENST00000466732 ZNF839A8K0R7 811 aa5.82□□□□□ -1.48
VPS13D-203ENST00000466732 CLASP2O75122 1294 aaKnown RBP5.82□□□□□ -1.48
VPS13D-203ENST00000466732 NPTXRO95502 500 aa5.82□□□□□ -1.48
VPS13D-203ENST00000466732 ASMTLO95671 621 aa5.82□□□□□ -1.48
VPS13D-203ENST00000466732 GJA4P35212 333 aa5.82□□□□□ -1.48
VPS13D-203ENST00000466732 DBPQ10586 325 aaPredicted RBP5.82□□□□□ -1.48
VPS13D-203ENST00000466732 IGSF22Q8N9C0 903 aa5.82□□□□□ -1.48
VPS13D-203ENST00000466732 TEPSINQ96N21 525 aa5.82□□□□□ -1.48
VPS13D-203ENST00000466732 L2HGDHQ9H9P8 463 aa5.82□□□□□ -1.48
VPS13D-203ENST00000466732 DUSP10Q9Y6W6 482 aa5.82□□□□□ -1.48
VPS13D-203ENST00000466732 KRTAP9-7A8MTY7 169 aa5.81□□□□□ -1.48
VPS13D-203ENST00000466732 DNAJC8O75937 253 aaPredicted RBP5.81□□□□□ -1.48
VPS13D-203ENST00000466732 C4BPAP04003 597 aaKnown RBP5.81□□□□□ -1.48
VPS13D-203ENST00000466732 COL6A1P12109 1028 aa5.81□□□□□ -1.48
VPS13D-203ENST00000466732 GLRBP48167 497 aa5.81□□□□□ -1.48
VPS13D-203ENST00000466732 SEC23AQ15436 765 aa5.81□□□□□ -1.48
VPS13D-203ENST00000466732 TMEM177Q53S58 311 aa5.81□□□□□ -1.48
VPS13D-203ENST00000466732 CPZQ66K79 652 aa5.81□□□□□ -1.48
VPS13D-203ENST00000466732 FSTL4Q6MZW2 842 aa5.81□□□□□ -1.48
VPS13D-203ENST00000466732 TRMT10BQ6PF06 316 aaKnown RBP5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms