RNA–Protein interactions for RNA: ENST00000466373.1

UFD1-206, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 3,059 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-206ENST00000466373 ABCB5Q2M3G0 1257 aa11.49□□□□□ -0.57
UFD1-206ENST00000466373 AMNQ9BXJ7 453 aa11.49□□□□□ -0.57
UFD1-206ENST00000466373 PLEKHA4Q9H4M7 779 aa11.49□□□□□ -0.57
UFD1-206ENST00000466373 CCDC66A2RUB6 948 aa11.49□□□□□ -0.57
UFD1-206ENST00000466373 SFI1A8K8P3 1242 aa11.49□□□□□ -0.57
UFD1-206ENST00000466373 RSPH10B2B2RC85 870 aa11.49□□□□□ -0.57
UFD1-206ENST00000466373 RSPH10BP0C881 870 aa11.49□□□□□ -0.57
UFD1-206ENST00000466373 ACTN1P12814 892 aa11.49□□□□□ -0.57
UFD1-206ENST00000466373 NR2F2P24468 414 aa11.49□□□□□ -0.57
UFD1-206ENST00000466373 CHRNA5P30532 468 aa11.49□□□□□ -0.57
UFD1-206ENST00000466373 SLC12A3P55017 1021 aa11.49□□□□□ -0.57
UFD1-206ENST00000466373 HNRNPH2P55795 449 aaKnown RBP11.49□□□□□ -0.57
UFD1-206ENST00000466373 FAM193AP78312 1265 aa11.49□□□□□ -0.57
UFD1-206ENST00000466373 HSP90B2PQ58FF3 399 aa11.49□□□□□ -0.57
UFD1-206ENST00000466373 DACT2Q5SW24 774 aa11.49□□□□□ -0.57
UFD1-206ENST00000466373 HYIQ5T013 277 aa11.49□□□□□ -0.57
UFD1-206ENST00000466373 DNAAF5Q86Y56 855 aa11.49□□□□□ -0.57
UFD1-206ENST00000466373 DCAF4Q8WV16 495 aa11.49□□□□□ -0.57
UFD1-206ENST00000466373 RIN2Q8WYP3 895 aaPredicted RBP11.49□□□□□ -0.57
UFD1-206ENST00000466373 TRERF1Q96PN7 1200 aa11.49□□□□□ -0.57
UFD1-206ENST00000466373 DHX36Q9H2U1 1008 aaKnown RBP11.49□□□□□ -0.57
UFD1-206ENST00000466373 KCTD10Q9H3F6 313 aa11.49□□□□□ -0.57
UFD1-206ENST00000466373 NYAP2Q9P242 653 aa11.49□□□□□ -0.57
UFD1-206ENST00000466373 SCN9AQ15858 1988 aa11.49□□□□□ -0.57
UFD1-206ENST00000466373 ABCB11O95342 1321 aa11.49□□□□□ -0.57
UFD1-206ENST00000466373 PRPF6O94906 941 aaKnown RBP11.49□□□□□ -0.57
UFD1-206ENST00000466373 RRP1BQ14684 758 aaKnown RBP11.49□□□□□ -0.57
UFD1-206ENST00000466373 AOC3Q16853 763 aa11.49□□□□□ -0.57
UFD1-206ENST00000466373 SFMBT2Q5VUG0 894 aa11.49□□□□□ -0.57
UFD1-206ENST00000466373 FBXO11Q86XK2 927 aa11.49□□□□□ -0.57
UFD1-206ENST00000466373 FAM133AQ8N9E0 248 aa11.49□□□□□ -0.57
UFD1-206ENST00000466373 ETNPPLQ8TBG4 499 aa11.49□□□□□ -0.57
UFD1-206ENST00000466373 TBC1D5Q92609 795 aa11.49□□□□□ -0.57
UFD1-206ENST00000466373 MKL1Q969V6 931 aa11.49□□□□□ -0.57
UFD1-206ENST00000466373 IQCDQ96DY2 449 aa11.49□□□□□ -0.57
UFD1-206ENST00000466373 MS4A14Q96JA4 679 aa11.49□□□□□ -0.57
UFD1-206ENST00000466373 OSBPL9Q96SU4 736 aa11.49□□□□□ -0.57
UFD1-206ENST00000466373 REEP2Q9BRK0 252 aa11.49□□□□□ -0.57
UFD1-206ENST00000466373 RGL1Q9NZL6 768 aa11.49□□□□□ -0.57
UFD1-206ENST00000466373 FAM170AA1A519 330 aa11.48□□□□□ -0.57
UFD1-206ENST00000466373 ZNF76P36508 570 aa11.48□□□□□ -0.57
UFD1-206ENST00000466373 UBXN2AP68543 259 aa11.48□□□□□ -0.57
UFD1-206ENST00000466373 SPIRE1Q08AE8 756 aa11.48□□□□□ -0.57
UFD1-206ENST00000466373 SLC9C1Q4G0N8 1177 aa11.48□□□□□ -0.57
UFD1-206ENST00000466373 SFR1Q86XK3 245 aa11.48□□□□□ -0.57
UFD1-206ENST00000466373 TRIM59Q8IWR1 403 aa11.48□□□□□ -0.57
UFD1-206ENST00000466373 SLFN12Q8IYM2 578 aa11.48□□□□□ -0.57
UFD1-206ENST00000466373 LENG9Q96B70 501 aa11.48□□□□□ -0.57
UFD1-206ENST00000466373 ALS2CR12Q96Q35 445 aa11.48□□□□□ -0.57
UFD1-206ENST00000466373 LRRC1Q9BTT6 524 aa11.48□□□□□ -0.57
UFD1-206ENST00000466373 ADAMTS1Q9UHI8 967 aa11.48□□□□□ -0.57
UFD1-206ENST00000466373 A0A1W2PRG0 241 aa11.48□□□□□ -0.57
UFD1-206ENST00000466373 CHMP2AO43633 222 aa11.48□□□□□ -0.57
UFD1-206ENST00000466373 SPATA31C1P0DKV0 1188 aa11.48□□□□□ -0.57
UFD1-206ENST00000466373 MYBP10242 640 aa11.48□□□□□ -0.57
UFD1-206ENST00000466373 ECE1P42892 770 aa11.48□□□□□ -0.57
UFD1-206ENST00000466373 KCNH2Q12809 1159 aa11.48□□□□□ -0.57
UFD1-206ENST00000466373 PTPROQ16827 1216 aa11.48□□□□□ -0.57
UFD1-206ENST00000466373 ASTE1Q2TB18 679 aaPredicted RBP11.48□□□□□ -0.57
UFD1-206ENST00000466373 CCDC181Q5TID7 509 aa11.48□□□□□ -0.57
UFD1-206ENST00000466373 HAUS3Q68CZ6 603 aa11.48□□□□□ -0.57
UFD1-206ENST00000466373 TMEM179Q6ZVK1 233 aa11.48□□□□□ -0.57
UFD1-206ENST00000466373 BHMT2Q9H2M3 363 aa11.48□□□□□ -0.57
UFD1-206ENST00000466373 IKZF4Q9H2S9 585 aa11.48□□□□□ -0.57
UFD1-206ENST00000466373 CEP72Q9P209 647 aa11.48□□□□□ -0.57
UFD1-206ENST00000466373 DMGDHQ9UI17 866 aaKnown RBP11.48□□□□□ -0.57
UFD1-206ENST00000466373 PACSIN2Q9UNF0 486 aaPredicted RBP11.48□□□□□ -0.57
UFD1-206ENST00000466373 DNM3Q9UQ16 869 aa11.48□□□□□ -0.57
UFD1-206ENST00000466373 CETN3O15182 167 aa11.47□□□□□ -0.57
UFD1-206ENST00000466373 LCA5LO95447 670 aa11.47□□□□□ -0.57
UFD1-206ENST00000466373 APBA3O96018 575 aa11.47□□□□□ -0.57
UFD1-206ENST00000466373 TUBBP07437 444 aa11.47□□□□□ -0.57
UFD1-206ENST00000466373 RNASE9P60153 205 aaKnown RBP11.47□□□□□ -0.57
UFD1-206ENST00000466373 KCNA1Q09470 495 aa11.47□□□□□ -0.57
UFD1-206ENST00000466373 GIT2Q14161 759 aa11.47□□□□□ -0.57
UFD1-206ENST00000466373 DCAF17Q5H9S7 520 aaPredicted RBP11.47□□□□□ -0.57
UFD1-206ENST00000466373 STRIP1Q5VSL9 837 aa11.47□□□□□ -0.57
UFD1-206ENST00000466373 SYDE2Q5VT97 1194 aa11.47□□□□□ -0.57
UFD1-206ENST00000466373 PIGOQ8TEQ8 1089 aa11.47□□□□□ -0.57
UFD1-206ENST00000466373 PRMT6Q96LA8 375 aaPredicted RBP11.47□□□□□ -0.57
UFD1-206ENST00000466373 CSRNP1Q96S65 589 aa11.47□□□□□ -0.57
UFD1-206ENST00000466373 PACSIN1Q9BY11 444 aa11.47□□□□□ -0.57
UFD1-206ENST00000466373 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.47□□□□□ -0.57
UFD1-206ENST00000466373 CYP3A7-CYP3A51PA0A087WV96 503 aa11.47□□□□□ -0.57
UFD1-206ENST00000466373 A0A087X0T9 212 aa11.47□□□□□ -0.57
UFD1-206ENST00000466373 MSH4O15457 936 aa11.47□□□□□ -0.57
UFD1-206ENST00000466373 FTCDO95954 541 aa11.47□□□□□ -0.57
UFD1-206ENST00000466373 FAM228BP0C875 321 aa11.47□□□□□ -0.57
UFD1-206ENST00000466373 BMP3P12645 472 aa11.47□□□□□ -0.57
UFD1-206ENST00000466373 SLC9A1P19634 815 aa11.47□□□□□ -0.57
UFD1-206ENST00000466373 CYP3A7P24462 503 aa11.47□□□□□ -0.57
UFD1-206ENST00000466373 TCERG1LQ5VWI1 586 aa11.47□□□□□ -0.57
UFD1-206ENST00000466373 SPATA4Q8NEY3 305 aa11.47□□□□□ -0.57
UFD1-206ENST00000466373 RPGRIP1Q96KN7 1286 aa11.47□□□□□ -0.57
UFD1-206ENST00000466373 CEP63Q96MT8 703 aa11.47□□□□□ -0.57
UFD1-206ENST00000466373 NAP1L4Q99733 375 aaKnown RBP11.47□□□□□ -0.57
UFD1-206ENST00000466373 GLT8D2Q9H1C3 349 aa11.47□□□□□ -0.57
UFD1-206ENST00000466373 GREB1LQ9C091 1923 aaPredicted RBP11.47□□□□□ -0.57
UFD1-206ENST00000466373 SIPA1L1O43166 1804 aa11.47□□□□□ -0.57
UFD1-206ENST00000466373 QSER1Q2KHR3 1735 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms