RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 USP49Q70CQ1 688 aa12.55□□□□□ -0.4
VCP-204ENST00000466100 TLK2Q86UE8 772 aa12.55□□□□□ -0.4
VCP-204ENST00000466100 DHX37Q8IY37 1157 aaKnown RBP12.55□□□□□ -0.4
VCP-204ENST00000466100 SMAP1Q8IYB5 467 aaPredicted RBP12.55□□□□□ -0.4
VCP-204ENST00000466100 RDM1Q8NG50 284 aa12.55□□□□□ -0.4
VCP-204ENST00000466100 ARMC5Q96C12 935 aa12.55□□□□□ -0.4
VCP-204ENST00000466100 AK8Q96MA6 479 aa12.55□□□□□ -0.4
VCP-204ENST00000466100 GPR20Q99678 358 aa12.55□□□□□ -0.4
VCP-204ENST00000466100 UPF3AQ9H1J1 476 aaKnown RBP12.55□□□□□ -0.4
VCP-204ENST00000466100 Q9Y3F1 56 aa12.55□□□□□ -0.4
VCP-204ENST00000466100 IGKV6D-21A0A0A0MT36 114 aa12.54□□□□□ -0.4
VCP-204ENST00000466100 FAM237AA0A1B0GTK4 181 aa12.54□□□□□ -0.4
VCP-204ENST00000466100 A0A1W2PQ27 194 aa12.54□□□□□ -0.4
VCP-204ENST00000466100 A0A1W2PQ64 194 aa12.54□□□□□ -0.4
VCP-204ENST00000466100 A0A1W2PQD8 194 aa12.54□□□□□ -0.4
VCP-204ENST00000466100 GSTTP1A0A1W2PQM5 241 aa12.54□□□□□ -0.4
VCP-204ENST00000466100 WDR64B1ANS9 1081 aa12.54□□□□□ -0.4
VCP-204ENST00000466100 CHMP2AO43633 222 aa12.54□□□□□ -0.4
VCP-204ENST00000466100 GADD45BO75293 160 aaPredicted RBP12.54□□□□□ -0.4
VCP-204ENST00000466100 SFNP31947 248 aa12.54□□□□□ -0.4
VCP-204ENST00000466100 JAK3P52333 1124 aa12.54□□□□□ -0.4
VCP-204ENST00000466100 LAMC2Q13753 1193 aa12.54□□□□□ -0.4
VCP-204ENST00000466100 CSPP1Q1MSJ5 1256 aa12.54□□□□□ -0.4
VCP-204ENST00000466100 HSDL1Q3SXM5 330 aa12.54□□□□□ -0.4
VCP-204ENST00000466100 SPECC1Q5M775 1068 aa12.54□□□□□ -0.4
VCP-204ENST00000466100 NCAPH2Q6IBW4 605 aa12.54□□□□□ -0.4
VCP-204ENST00000466100 PPTC7Q8NI37 304 aa12.54□□□□□ -0.4
VCP-204ENST00000466100 EPSTI1Q96J88 318 aa12.54□□□□□ -0.4
VCP-204ENST00000466100 ZNF333Q96JL9 665 aa12.54□□□□□ -0.4
VCP-204ENST00000466100 PAK6Q9NQU5 681 aaPredicted RBP12.54□□□□□ -0.4
VCP-204ENST00000466100 LMBRD1Q9NUN5 540 aa12.54□□□□□ -0.4
VCP-204ENST00000466100 LRWD1Q9UFC0 647 aa12.54□□□□□ -0.4
VCP-204ENST00000466100 DDX20Q9UHI6 824 aaKnown RBP12.54□□□□□ -0.4
VCP-204ENST00000466100 SYNRGQ9UMZ2 1314 aa12.54□□□□□ -0.4
VCP-204ENST00000466100 A6NJR5 290 aa12.53□□□□□ -0.4
VCP-204ENST00000466100 ADAMTS4O75173 837 aa12.53□□□□□ -0.4
VCP-204ENST00000466100 LGR5O75473 907 aa12.53□□□□□ -0.4
VCP-204ENST00000466100 SUPT20HL2P0C7V6 817 aa12.53□□□□□ -0.4
VCP-204ENST00000466100 SPATA31C1P0DKV0 1188 aa12.53□□□□□ -0.4
VCP-204ENST00000466100 CMA1P23946 247 aa12.53□□□□□ -0.4
VCP-204ENST00000466100 CDC25AP30304 524 aa12.53□□□□□ -0.4
VCP-204ENST00000466100 MCM4P33991 863 aa12.53□□□□□ -0.4
VCP-204ENST00000466100 GJA9P57773 515 aa12.53□□□□□ -0.4
VCP-204ENST00000466100 IRX5P78411 483 aaPredicted RBP12.53□□□□□ -0.4
VCP-204ENST00000466100 EPHA7Q15375 998 aa12.53□□□□□ -0.4
VCP-204ENST00000466100 MTFR1Q15390 333 aa12.53□□□□□ -0.4
VCP-204ENST00000466100 UGCGQ16739 394 aa12.53□□□□□ -0.4
VCP-204ENST00000466100 HYIQ5T013 277 aa12.53□□□□□ -0.4
VCP-204ENST00000466100 LHX8Q68G74 356 aa12.53□□□□□ -0.4
VCP-204ENST00000466100 MIER3Q7Z3K6 550 aa12.53□□□□□ -0.4
VCP-204ENST00000466100 OR6J1Q8NGC5 347 aa12.53□□□□□ -0.4
VCP-204ENST00000466100 AFG1LQ8WV93 481 aa12.53□□□□□ -0.4
VCP-204ENST00000466100 SYMPKQ92797 1274 aaKnown RBP12.53□□□□□ -0.4
VCP-204ENST00000466100 SPATA33Q96N06 139 aa12.53□□□□□ -0.4
VCP-204ENST00000466100 PCYT2Q99447 389 aa12.53□□□□□ -0.4
VCP-204ENST00000466100 HSD17B14Q9BPX1 270 aa12.53□□□□□ -0.4
VCP-204ENST00000466100 EIF2AK1Q9BQI3 630 aaKnown RBP12.53□□□□□ -0.4
VCP-204ENST00000466100 RAB34Q9BZG1 259 aa12.53□□□□□ -0.4
VCP-204ENST00000466100 CCSER1Q9C0I3 900 aa12.53□□□□□ -0.4
VCP-204ENST00000466100 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.53□□□□□ -0.4
VCP-204ENST00000466100 UNC93B1Q9H1C4 597 aa12.53□□□□□ -0.4
VCP-204ENST00000466100 GOLPH3LQ9H4A5 285 aa12.53□□□□□ -0.4
VCP-204ENST00000466100 MLXIPQ9HAP2 919 aa12.53□□□□□ -0.4
VCP-204ENST00000466100 HMX1Q9NP08 348 aaPredicted RBP12.53□□□□□ -0.4
VCP-204ENST00000466100 DISC1Q9NRI5 854 aa12.53□□□□□ -0.4
VCP-204ENST00000466100 HPSEQ9Y251 543 aa12.53□□□□□ -0.4
VCP-204ENST00000466100 PCDHA10Q9Y5I2 948 aa12.53□□□□□ -0.4
VCP-204ENST00000466100 KAT6AQ92794 2004 aa12.53□□□□□ -0.4
VCP-204ENST00000466100 IGSF9BQ9UPX0 1349 aa12.53□□□□□ -0.4
VCP-204ENST00000466100 A0A087X0B3 334 aa12.52□□□□□ -0.41
VCP-204ENST00000466100 MYADML2A6NDP7 307 aa12.52□□□□□ -0.41
VCP-204ENST00000466100 DYNC1LI2O43237 492 aaPredicted RBP12.52□□□□□ -0.41
VCP-204ENST00000466100 SLC26A4O43511 780 aa12.52□□□□□ -0.41
VCP-204ENST00000466100 MED24O75448 989 aa12.52□□□□□ -0.41
VCP-204ENST00000466100 MMP3P08254 477 aa12.52□□□□□ -0.41
VCP-204ENST00000466100 RARBP10826 455 aa12.52□□□□□ -0.41
VCP-204ENST00000466100 RPA1P27694 616 aa12.52□□□□□ -0.41
VCP-204ENST00000466100 CNGA1P29973 690 aa12.52□□□□□ -0.41
VCP-204ENST00000466100 SP4Q02446 784 aa12.52□□□□□ -0.41
VCP-204ENST00000466100 ECM1Q16610 540 aa12.52□□□□□ -0.41
VCP-204ENST00000466100 TMEM119Q4V9L6 283 aa12.52□□□□□ -0.41
VCP-204ENST00000466100 CCDC60Q8IWA6 550 aaPredicted RBP12.52□□□□□ -0.41
VCP-204ENST00000466100 NEK9Q8TD19 979 aa12.52□□□□□ -0.41
VCP-204ENST00000466100 LRRC15Q8TF66 581 aa12.52□□□□□ -0.41
VCP-204ENST00000466100 SEPT1Q8WYJ6 367 aa12.52□□□□□ -0.41
VCP-204ENST00000466100 PNMA5Q96PV4 448 aa12.52□□□□□ -0.41
VCP-204ENST00000466100 POLR3CQ9BUI4 534 aaPredicted RBP12.52□□□□□ -0.41
VCP-204ENST00000466100 WRAP73Q9P2S5 460 aaPredicted RBP12.52□□□□□ -0.41
VCP-204ENST00000466100 TCEAL9Q9UHQ7 104 aa12.52□□□□□ -0.41
VCP-204ENST00000466100 EMSYQ7Z589 1322 aa12.52□□□□□ -0.41
VCP-204ENST00000466100 TRIP12Q14669 1992 aaPredicted RBP12.51□□□□□ -0.41
VCP-204ENST00000466100 POTEB3A0JP26 581 aa12.51□□□□□ -0.41
VCP-204ENST00000466100 MSCO60682 206 aa12.51□□□□□ -0.41
VCP-204ENST00000466100 PRPF40AO75400 957 aaKnown RBP12.51□□□□□ -0.41
VCP-204ENST00000466100 SLITRK3O94933 977 aa12.51□□□□□ -0.41
VCP-204ENST00000466100 CCL5P13501 91 aa12.51□□□□□ -0.41
VCP-204ENST00000466100 PFKFB1P16118 471 aa12.51□□□□□ -0.41
VCP-204ENST00000466100 CST5P28325 142 aaPredicted RBP12.51□□□□□ -0.41
VCP-204ENST00000466100 TCF7P36402 384 aaPredicted RBP12.51□□□□□ -0.41
VCP-204ENST00000466100 UBE2HP62256 183 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms