RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 PARD3BQ8TEW8 1205 aa10.33□□□□□ -0.76
SCAF11-205ENST00000465950 NUP58Q9BVL2 599 aa10.33□□□□□ -0.76
SCAF11-205ENST00000465950 ELP1O95163 1332 aa10.33□□□□□ -0.76
SCAF11-205ENST00000465950 PNPLA7Q6ZV29 1317 aa10.33□□□□□ -0.76
SCAF11-205ENST00000465950 MCM4P33991 863 aa10.33□□□□□ -0.76
SCAF11-205ENST00000465950 LONP1P36776 959 aaKnown RBP10.33□□□□□ -0.76
SCAF11-205ENST00000465950 BTG3Q14201 252 aaPredicted RBP10.33□□□□□ -0.76
SCAF11-205ENST00000465950 MAP7Q14244 749 aa10.33□□□□□ -0.76
SCAF11-205ENST00000465950 TBC1D19Q8N5T2 526 aa10.33□□□□□ -0.76
SCAF11-205ENST00000465950 PPP1R14CQ8TAE6 165 aa10.33□□□□□ -0.76
SCAF11-205ENST00000465950 KLHDC4Q8TBB5 520 aa10.33□□□□□ -0.76
SCAF11-205ENST00000465950 TM6SF1Q9BZW5 370 aa10.33□□□□□ -0.76
SCAF11-205ENST00000465950 STK17AQ9UEE5 414 aa10.33□□□□□ -0.76
SCAF11-205ENST00000465950 RPTORQ8N122 1335 aa10.33□□□□□ -0.76
SCAF11-205ENST00000465950 RNF8O76064 485 aa10.33□□□□□ -0.76
SCAF11-205ENST00000465950 ATN1P54259 1190 aaPredicted RBP10.33□□□□□ -0.76
SCAF11-205ENST00000465950 MAP9Q49MG5 647 aa10.33□□□□□ -0.76
SCAF11-205ENST00000465950 SEL1L2Q5TEA6 688 aa10.33□□□□□ -0.76
SCAF11-205ENST00000465950 GSTA5Q7RTV2 222 aa10.33□□□□□ -0.76
SCAF11-205ENST00000465950 FIBCD1Q8N539 461 aa10.33□□□□□ -0.76
SCAF11-205ENST00000465950 FAM84BQ96KN1 310 aaPredicted RBP10.33□□□□□ -0.76
SCAF11-205ENST00000465950 NRBP1Q9UHY1 535 aa10.33□□□□□ -0.76
SCAF11-205ENST00000465950 SH3BP1Q9Y3L3 701 aa10.33□□□□□ -0.76
SCAF11-205ENST00000465950 ZMYM6O95789 1325 aa10.33□□□□□ -0.76
SCAF11-205ENST00000465950 EIF3JO75822 258 aaKnown RBP10.33□□□□□ -0.76
SCAF11-205ENST00000465950 APOEP02649 317 aa10.33□□□□□ -0.76
SCAF11-205ENST00000465950 CCDC84Q86UT8 332 aaPredicted RBP10.33□□□□□ -0.76
SCAF11-205ENST00000465950 DNERQ8NFT8 737 aa10.33□□□□□ -0.76
SCAF11-205ENST00000465950 TNIP3Q96KP6 325 aa10.33□□□□□ -0.76
SCAF11-205ENST00000465950 RNPC3Q96LT9 517 aaKnown RBP10.33□□□□□ -0.76
SCAF11-205ENST00000465950 RIPOR3Q96MK2 946 aa10.33□□□□□ -0.76
SCAF11-205ENST00000465950 ANAPC5Q9UJX4 755 aa10.33□□□□□ -0.76
SCAF11-205ENST00000465950 PCDHA10Q9Y5I2 948 aa10.33□□□□□ -0.76
SCAF11-205ENST00000465950 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.33□□□□□ -0.76
SCAF11-205ENST00000465950 KIDINS220Q9ULH0 1771 aa10.33□□□□□ -0.76
SCAF11-205ENST00000465950 MYL1P05976 194 aa10.32□□□□□ -0.76
SCAF11-205ENST00000465950 CHMLP26374 656 aa10.32□□□□□ -0.76
SCAF11-205ENST00000465950 PIK3CAP42336 1068 aa10.32□□□□□ -0.76
SCAF11-205ENST00000465950 XKR3Q5GH77 459 aa10.32□□□□□ -0.76
SCAF11-205ENST00000465950 CCDC183Q5T5S1 534 aa10.32□□□□□ -0.76
SCAF11-205ENST00000465950 CCDC149Q6ZUS6 474 aa10.32□□□□□ -0.76
SCAF11-205ENST00000465950 SENP6Q9GZR1 1112 aaPredicted RBP10.32□□□□□ -0.76
SCAF11-205ENST00000465950 PQBP1O60828 265 aaKnown RBP10.32□□□□□ -0.76
SCAF11-205ENST00000465950 ZMYND10O75800 440 aa10.32□□□□□ -0.76
SCAF11-205ENST00000465950 COG7P83436 770 aa10.32□□□□□ -0.76
SCAF11-205ENST00000465950 IFRD2Q12894 506 aaPredicted RBP10.32□□□□□ -0.76
SCAF11-205ENST00000465950 CDC42EP5Q6NZY7 148 aa10.32□□□□□ -0.76
SCAF11-205ENST00000465950 CEP68Q76N32 757 aa10.32□□□□□ -0.76
SCAF11-205ENST00000465950 BZW1Q7L1Q6 419 aaKnown RBP10.32□□□□□ -0.76
SCAF11-205ENST00000465950 TMC7Q7Z402 723 aa10.32□□□□□ -0.76
SCAF11-205ENST00000465950 MRPS31Q92665 395 aaKnown RBP10.32□□□□□ -0.76
SCAF11-205ENST00000465950 NAP1L5Q96NT1 182 aaPredicted RBP10.32□□□□□ -0.76
SCAF11-205ENST00000465950 EHD4Q9H223 541 aa10.32□□□□□ -0.76
SCAF11-205ENST00000465950 CDC42BPBQ9Y5S2 1711 aa10.32□□□□□ -0.76
SCAF11-205ENST00000465950 A6NJR5 290 aa10.32□□□□□ -0.76
SCAF11-205ENST00000465950 ALDH1A2O94788 518 aa10.32□□□□□ -0.76
SCAF11-205ENST00000465950 P4HBP07237 508 aaKnown RBP10.32□□□□□ -0.76
SCAF11-205ENST00000465950 CBX1P83916 185 aa10.32□□□□□ -0.76
SCAF11-205ENST00000465950 GIT2Q14161 759 aa10.32□□□□□ -0.76
SCAF11-205ENST00000465950 INAVAQ3KP66 663 aa10.32□□□□□ -0.76
SCAF11-205ENST00000465950 APBB2Q92870 758 aa10.32□□□□□ -0.76
SCAF11-205ENST00000465950 GGPS1O95749 300 aa10.32□□□□□ -0.76
SCAF11-205ENST00000465950 DCAF4L1Q3SXM0 396 aa10.32□□□□□ -0.76
SCAF11-205ENST00000465950 C6orf163Q5TEZ5 329 aa10.32□□□□□ -0.76
SCAF11-205ENST00000465950 GPRASP2Q96D09 838 aa10.32□□□□□ -0.76
SCAF11-205ENST00000465950 JPH1Q9HDC5 661 aaPredicted RBP10.32□□□□□ -0.76
SCAF11-205ENST00000465950 ZBTB40Q9NUA8 1239 aa10.32□□□□□ -0.76
SCAF11-205ENST00000465950 DSEQ9UL01 958 aa10.32□□□□□ -0.76
SCAF11-205ENST00000465950 DEPDC5O75140 1603 aa10.31□□□□□ -0.76
SCAF11-205ENST00000465950 EIF3CLB5ME19 914 aaKnown RBP10.31□□□□□ -0.76
SCAF11-205ENST00000465950 FGBP02675 491 aa10.31□□□□□ -0.76
SCAF11-205ENST00000465950 ERCC5P28715 1186 aaPredicted RBP10.31□□□□□ -0.76
SCAF11-205ENST00000465950 PCSK1P29120 753 aa10.31□□□□□ -0.76
SCAF11-205ENST00000465950 PRELPP51888 382 aa10.31□□□□□ -0.76
SCAF11-205ENST00000465950 RPL10AP62906 217 aaKnown RBP10.31□□□□□ -0.76
SCAF11-205ENST00000465950 SBK1Q52WX2 424 aa10.31□□□□□ -0.76
SCAF11-205ENST00000465950 SRBD1Q8N5C6 995 aaKnown RBP10.31□□□□□ -0.76
SCAF11-205ENST00000465950 EIF3CQ99613 913 aaKnown RBP10.31□□□□□ -0.76
SCAF11-205ENST00000465950 ST7Q9NRC1 585 aa10.31□□□□□ -0.76
SCAF11-205ENST00000465950 TACC3Q9Y6A5 838 aa10.31□□□□□ -0.76
SCAF11-205ENST00000465950 LTBP3Q9NS15 1303 aa10.31□□□□□ -0.76
SCAF11-205ENST00000465950 ATRNO75882 1429 aa10.31□□□□□ -0.76
SCAF11-205ENST00000465950 SLC27A2O14975 620 aa10.31□□□□□ -0.76
SCAF11-205ENST00000465950 CYP2C19P33261 490 aa10.31□□□□□ -0.76
SCAF11-205ENST00000465950 THPOP40225 353 aa10.31□□□□□ -0.76
SCAF11-205ENST00000465950 CACNB3P54284 484 aa10.31□□□□□ -0.76
SCAF11-205ENST00000465950 OXCT1P55809 520 aa10.31□□□□□ -0.76
SCAF11-205ENST00000465950 DYNLL1P63167 89 aaKnown RBP10.31□□□□□ -0.76
SCAF11-205ENST00000465950 CD302Q8IX05 232 aa10.31□□□□□ -0.76
SCAF11-205ENST00000465950 DDX27Q96GQ7 796 aaKnown RBP10.31□□□□□ -0.76
SCAF11-205ENST00000465950 SHDQ96IW2 340 aa10.31□□□□□ -0.76
SCAF11-205ENST00000465950 SAMD11Q96NU1 681 aa10.31□□□□□ -0.76
SCAF11-205ENST00000465950 PUS3Q9BZE2 481 aaKnown RBP10.31□□□□□ -0.76
SCAF11-205ENST00000465950 STMN4Q9H169 189 aaPredicted RBP10.31□□□□□ -0.76
SCAF11-205ENST00000465950 PFKMP08237 780 aa10.31□□□□□ -0.76
SCAF11-205ENST00000465950 VIL1P09327 827 aaKnown RBP10.31□□□□□ -0.76
SCAF11-205ENST00000465950 ALDH3A1P30838 453 aa10.31□□□□□ -0.76
SCAF11-205ENST00000465950 PNPLA4P41247 253 aa10.31□□□□□ -0.76
SCAF11-205ENST00000465950 ZNF512BQ96KM6 892 aaPredicted RBP10.31□□□□□ -0.76
SCAF11-205ENST00000465950 TTC25Q96NG3 672 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms