RNA–Protein interactions for RNA: ENST00000465743.2

COL2A1-203, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 4

Gene COL2A1, Length 546 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-203ENST00000465743 SERINC5Q86VE9 423 aa23.04■■□□□ 1.28
COL2A1-203ENST00000465743 ATP6V0A1Q93050 837 aa23.04■■□□□ 1.28
COL2A1-203ENST00000465743 MXRA8Q9BRK3 442 aa23.04■■□□□ 1.28
COL2A1-203ENST00000465743 RNPEPQ9H4A4 650 aa23.04■■□□□ 1.28
COL2A1-203ENST00000465743 EHMT1Q9H9B1 1298 aa23.04■■□□□ 1.28
COL2A1-203ENST00000465743 SETD4Q9NVD3 440 aa23.04■■□□□ 1.28
COL2A1-203ENST00000465743 REV3LO60673 3130 aa23.04■■□□□ 1.28
COL2A1-203ENST00000465743 GSTTP1A0A1W2PQM5 241 aa23.03■■□□□ 1.28
COL2A1-203ENST00000465743 ARP10275 920 aa23.03■■□□□ 1.28
COL2A1-203ENST00000465743 MARK3P27448 753 aa23.03■■□□□ 1.28
COL2A1-203ENST00000465743 SREBF1P36956 1147 aa23.03■■□□□ 1.28
COL2A1-203ENST00000465743 RAB30Q15771 203 aa23.03■■□□□ 1.28
COL2A1-203ENST00000465743 TMCO2Q7Z6W1 182 aaPredicted RBP23.03■■□□□ 1.28
COL2A1-203ENST00000465743 RASGRP4Q8TDF6 673 aa23.03■■□□□ 1.28
COL2A1-203ENST00000465743 CDHR1Q96JP9 859 aa23.03■■□□□ 1.28
COL2A1-203ENST00000465743 UIMC1Q96RL1 719 aa23.03■■□□□ 1.28
COL2A1-203ENST00000465743 SLC26A6Q9BXS9 759 aa23.03■■□□□ 1.28
COL2A1-203ENST00000465743 KCNH7Q9NS40 1196 aa23.03■■□□□ 1.28
COL2A1-203ENST00000465743 MSRAQ9UJ68 235 aa23.03■■□□□ 1.28
COL2A1-203ENST00000465743 ZNF215Q9UL58 517 aaPredicted RBP23.03■■□□□ 1.28
COL2A1-203ENST00000465743 VCANP13611 3396 aa23.03■■□□□ 1.28
COL2A1-203ENST00000465743 MICAL3Q7RTP6 2002 aa23.03■■□□□ 1.28
COL2A1-203ENST00000465743 PRPF3O43395 683 aaKnown RBP23.02■■□□□ 1.28
COL2A1-203ENST00000465743 CTSHP09668 335 aa23.02■■□□□ 1.28
COL2A1-203ENST00000465743 ACTN1P12814 892 aa23.02■■□□□ 1.28
COL2A1-203ENST00000465743 THPOP40225 353 aa23.02■■□□□ 1.28
COL2A1-203ENST00000465743 GIMAP8Q8ND71 665 aaPredicted RBP23.02■■□□□ 1.28
COL2A1-203ENST00000465743 MAFAQ8NHW3 353 aaPredicted RBP23.02■■□□□ 1.28
COL2A1-203ENST00000465743 LMBR1Q8WVP7 490 aa23.02■■□□□ 1.28
COL2A1-203ENST00000465743 IL17RAQ96F46 866 aa23.02■■□□□ 1.28
COL2A1-203ENST00000465743 OSBPL7Q9BZF2 842 aa23.02■■□□□ 1.28
COL2A1-203ENST00000465743 PRDM12Q9H4Q4 367 aa23.02■■□□□ 1.28
COL2A1-203ENST00000465743 ARHGEF15O94989 841 aa23.01■■□□□ 1.27
COL2A1-203ENST00000465743 EVCP57679 992 aa23.01■■□□□ 1.27
COL2A1-203ENST00000465743 ARHGAP4P98171 946 aa23.01■■□□□ 1.27
COL2A1-203ENST00000465743 ITGB3BPQ13352 177 aaPredicted RBP23.01■■□□□ 1.27
COL2A1-203ENST00000465743 AP3B2Q13367 1082 aa23.01■■□□□ 1.27
COL2A1-203ENST00000465743 UPF2Q9HAU5 1272 aaKnown RBP23.01■■□□□ 1.27
COL2A1-203ENST00000465743 JPH1Q9HDC5 661 aaPredicted RBP23.01■■□□□ 1.27
COL2A1-203ENST00000465743 FOSP01100 380 aaPredicted RBP23■■□□□ 1.27
COL2A1-203ENST00000465743 CXCL10P02778 98 aa23■■□□□ 1.27
COL2A1-203ENST00000465743 WDR5P61964 334 aaKnown RBP23■■□□□ 1.27
COL2A1-203ENST00000465743 DEFB103AP81534 67 aa23■■□□□ 1.27
COL2A1-203ENST00000465743 STK3Q13188 491 aa23■■□□□ 1.27
COL2A1-203ENST00000465743 CEP55Q53EZ4 464 aa23■■□□□ 1.27
COL2A1-203ENST00000465743 PCYT2Q99447 389 aa23■■□□□ 1.27
COL2A1-203ENST00000465743 ZMYND12Q9H0C1 365 aa23■■□□□ 1.27
COL2A1-203ENST00000465743 PDRG1Q9NUG6 133 aa23■■□□□ 1.27
COL2A1-203ENST00000465743 VPS54Q9P1Q0 977 aa23■■□□□ 1.27
COL2A1-203ENST00000465743 ESYT2A0FGR8 921 aa22.99■■□□□ 1.27
COL2A1-203ENST00000465743 FAM86B1E9PN63 330 aa22.99■■□□□ 1.27
COL2A1-203ENST00000465743 DTNBO60941 627 aa22.99■■□□□ 1.27
COL2A1-203ENST00000465743 FAM86B2P0C5J1 330 aa22.99■■□□□ 1.27
COL2A1-203ENST00000465743 IFNAR1P17181 557 aa22.99■■□□□ 1.27
COL2A1-203ENST00000465743 PPP2R2DQ66LE6 453 aa22.99■■□□□ 1.27
COL2A1-203ENST00000465743 RUFY4Q6ZNE9 571 aa22.99■■□□□ 1.27
COL2A1-203ENST00000465743 USP38Q8NB14 1042 aa22.99■■□□□ 1.27
COL2A1-203ENST00000465743 SEPT1Q8WYJ6 367 aa22.99■■□□□ 1.27
COL2A1-203ENST00000465743 ZBTB10Q96DT7 871 aa22.99■■□□□ 1.27
COL2A1-203ENST00000465743 SLC9A7Q96T83 725 aa22.99■■□□□ 1.27
COL2A1-203ENST00000465743 RNF26Q9BY78 433 aaPredicted RBP22.99■■□□□ 1.27
COL2A1-203ENST00000465743 AGO4Q9HCK5 861 aaKnown RBP22.99■■□□□ 1.27
COL2A1-203ENST00000465743 SLC9A2Q9UBY0 812 aa22.99■■□□□ 1.27
COL2A1-203ENST00000465743 PCDHA11Q9Y5I1 949 aa22.99■■□□□ 1.27
COL2A1-203ENST00000465743 TRANK1O15050 2925 aa22.99■■□□□ 1.27
COL2A1-203ENST00000465743 COL4A4P53420 1690 aaPredicted RBP22.98■■□□□ 1.27
COL2A1-203ENST00000465743 DDX39AO00148 427 aaKnown RBP22.98■■□□□ 1.27
COL2A1-203ENST00000465743 CA3P07451 260 aa22.98■■□□□ 1.27
COL2A1-203ENST00000465743 CNKSR3Q6P9H4 555 aa22.98■■□□□ 1.27
COL2A1-203ENST00000465743 SPRED2Q7Z698 418 aa22.98■■□□□ 1.27
COL2A1-203ENST00000465743 HERC6Q8IVU3 1022 aa22.98■■□□□ 1.27
COL2A1-203ENST00000465743 REXO1Q8N1G1 1221 aaKnown RBP22.98■■□□□ 1.27
COL2A1-203ENST00000465743 GLG1Q92896 1179 aa22.98■■□□□ 1.27
COL2A1-203ENST00000465743 SLC28A3Q9HAS3 691 aa22.98■■□□□ 1.27
COL2A1-203ENST00000465743 RSPH10B2B2RC85 870 aa22.97■■□□□ 1.27
COL2A1-203ENST00000465743 MEIS1O00470 390 aa22.97■■□□□ 1.27
COL2A1-203ENST00000465743 BAIAP3O94812 1187 aa22.97■■□□□ 1.27
COL2A1-203ENST00000465743 RSPH10BP0C881 870 aa22.97■■□□□ 1.27
COL2A1-203ENST00000465743 ZNF76P36508 570 aa22.97■■□□□ 1.27
COL2A1-203ENST00000465743 ADAM17P78536 824 aa22.97■■□□□ 1.27
COL2A1-203ENST00000465743 AKAP17AQ02040 695 aaKnown RBP22.97■■□□□ 1.27
COL2A1-203ENST00000465743 PPFIA1Q13136 1202 aa22.97■■□□□ 1.27
COL2A1-203ENST00000465743 ADGRE1Q14246 886 aa22.97■■□□□ 1.27
COL2A1-203ENST00000465743 CRYGNQ8WXF5 182 aa22.97■■□□□ 1.27
COL2A1-203ENST00000465743 C22orf23Q9BZE7 217 aa22.97■■□□□ 1.27
COL2A1-203ENST00000465743 GLT8D2Q9H1C3 349 aa22.97■■□□□ 1.27
COL2A1-203ENST00000465743 C6orf50Q9HD87 102 aa22.97■■□□□ 1.27
COL2A1-203ENST00000465743 IGLV3-22A0A075B6J6 115 aa22.96■■□□□ 1.27
COL2A1-203ENST00000465743 CCNE2O96020 404 aa22.96■■□□□ 1.27
COL2A1-203ENST00000465743 KCNJ6P48051 423 aa22.96■■□□□ 1.27
COL2A1-203ENST00000465743 ACTR2P61160 394 aa22.96■■□□□ 1.27
COL2A1-203ENST00000465743 GRIK4Q16099 956 aa22.96■■□□□ 1.27
COL2A1-203ENST00000465743 TEX2Q8IWB9 1127 aa22.96■■□□□ 1.27
COL2A1-203ENST00000465743 CCDC12Q8WUD4 166 aaPredicted RBP22.96■■□□□ 1.27
COL2A1-203ENST00000465743 AIFM3Q96NN9 605 aa22.96■■□□□ 1.27
COL2A1-203ENST00000465743 SDF4Q9BRK5 362 aa22.96■■□□□ 1.27
COL2A1-203ENST00000465743 ERAP1Q9NZ08 941 aa22.96■■□□□ 1.27
COL2A1-203ENST00000465743 NFASCO94856 1347 aa22.96■■□□□ 1.27
COL2A1-203ENST00000465743 EMSYQ7Z589 1322 aa22.96■■□□□ 1.27
COL2A1-203ENST00000465743 LCHNA4D1U4 455 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms