RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 TELO2Q9Y4R8 837 aa13.65□□□□□ -0.22
CNOT4-208ENST00000465721 SPTBN4Q9H254 2564 aa13.65□□□□□ -0.22
CNOT4-208ENST00000465721 ADGRA3Q8IWK6 1321 aa13.64□□□□□ -0.23
CNOT4-208ENST00000465721 EVPLQ92817 2033 aa13.64□□□□□ -0.23
CNOT4-208ENST00000465721 GCOM1H8Y6P7 765 aaPredicted RBP13.64□□□□□ -0.23
CNOT4-208ENST00000465721 NOP56O00567 594 aaKnown RBP13.64□□□□□ -0.23
CNOT4-208ENST00000465721 GRM6O15303 877 aa13.64□□□□□ -0.23
CNOT4-208ENST00000465721 POLR2MP0CAP2 368 aa13.64□□□□□ -0.23
CNOT4-208ENST00000465721 IRS1P35568 1242 aa13.64□□□□□ -0.23
CNOT4-208ENST00000465721 HYAL1Q12794 435 aa13.64□□□□□ -0.23
CNOT4-208ENST00000465721 GRM4Q14833 912 aa13.64□□□□□ -0.23
CNOT4-208ENST00000465721 IMMTQ16891 758 aaKnown RBP13.64□□□□□ -0.23
CNOT4-208ENST00000465721 EP400NLQ6ZTU2 488 aa13.64□□□□□ -0.23
CNOT4-208ENST00000465721 CYB5R4Q7L1T6 521 aa13.64□□□□□ -0.23
CNOT4-208ENST00000465721 FCHSD1Q86WN1 690 aa13.64□□□□□ -0.23
CNOT4-208ENST00000465721 HOMER1Q86YM7 354 aa13.64□□□□□ -0.23
CNOT4-208ENST00000465721 PLEKHM2Q8IWE5 1019 aa13.64□□□□□ -0.23
CNOT4-208ENST00000465721 SMC5Q8IY18 1101 aa13.64□□□□□ -0.23
CNOT4-208ENST00000465721 FBXL18Q96ME1 805 aa13.64□□□□□ -0.23
CNOT4-208ENST00000465721 PIGSQ96S52 555 aa13.64□□□□□ -0.23
CNOT4-208ENST00000465721 GPR20Q99678 358 aa13.64□□□□□ -0.23
CNOT4-208ENST00000465721 USP26Q9BXU7 913 aa13.64□□□□□ -0.23
CNOT4-208ENST00000465721 KCNH6Q9H252 994 aa13.64□□□□□ -0.23
CNOT4-208ENST00000465721 IL25Q9H293 177 aa13.64□□□□□ -0.23
CNOT4-208ENST00000465721 OSBPL3Q9H4L5 887 aa13.64□□□□□ -0.23
CNOT4-208ENST00000465721 CNNM2Q9H8M5 875 aa13.64□□□□□ -0.23
CNOT4-208ENST00000465721 DIAPH3Q9NSV4 1193 aa13.64□□□□□ -0.23
CNOT4-208ENST00000465721 WDR81Q562E7 1941 aa13.64□□□□□ -0.23
CNOT4-208ENST00000465721 DMDP11532 3685 aa13.63□□□□□ -0.23
CNOT4-208ENST00000465721 SPATA31C2B4DYI2 1134 aa13.63□□□□□ -0.23
CNOT4-208ENST00000465721 CYTH3O43739 400 aa13.63□□□□□ -0.23
CNOT4-208ENST00000465721 TBX10O75333 385 aa13.63□□□□□ -0.23
CNOT4-208ENST00000465721 ARHGAP4P98171 946 aa13.63□□□□□ -0.23
CNOT4-208ENST00000465721 DLX2Q07687 328 aaPredicted RBP13.63□□□□□ -0.23
CNOT4-208ENST00000465721 SMAD2Q15796 467 aaKnown RBP13.63□□□□□ -0.23
CNOT4-208ENST00000465721 GNPTABQ3T906 1256 aa13.63□□□□□ -0.23
CNOT4-208ENST00000465721 HFE2Q6ZVN8 426 aa13.63□□□□□ -0.23
CNOT4-208ENST00000465721 CYFIP1Q7L576 1253 aa13.63□□□□□ -0.23
CNOT4-208ENST00000465721 FIBCD1Q8N539 461 aa13.63□□□□□ -0.23
CNOT4-208ENST00000465721 IL17RAQ96F46 866 aa13.63□□□□□ -0.23
CNOT4-208ENST00000465721 LMAN2LQ9H0V9 348 aa13.63□□□□□ -0.23
CNOT4-208ENST00000465721 RIOX1Q9H6W3 641 aa13.63□□□□□ -0.23
CNOT4-208ENST00000465721 SUPT16HQ9Y5B9 1047 aaKnown RBP13.63□□□□□ -0.23
CNOT4-208ENST00000465721 FIBPO43427 364 aa13.62□□□□□ -0.23
CNOT4-208ENST00000465721 MBTPS2O43462 519 aa13.62□□□□□ -0.23
CNOT4-208ENST00000465721 STAM2O75886 525 aa13.62□□□□□ -0.23
CNOT4-208ENST00000465721 CHRNA1P02708 482 aa13.62□□□□□ -0.23
CNOT4-208ENST00000465721 RB1P06400 928 aa13.62□□□□□ -0.23
CNOT4-208ENST00000465721 GNAT1P11488 350 aa13.62□□□□□ -0.23
CNOT4-208ENST00000465721 BMPR1AP36894 532 aa13.62□□□□□ -0.23
CNOT4-208ENST00000465721 MGAT3Q09327 533 aa13.62□□□□□ -0.23
CNOT4-208ENST00000465721 NEDD9Q14511 834 aa13.62□□□□□ -0.23
CNOT4-208ENST00000465721 CLUL1Q15846 466 aa13.62□□□□□ -0.23
CNOT4-208ENST00000465721 RUFY4Q6ZNE9 571 aa13.62□□□□□ -0.23
CNOT4-208ENST00000465721 CLP1Q92989 425 aaKnown RBP13.62□□□□□ -0.23
CNOT4-208ENST00000465721 C11orf84Q9BUA3 381 aaPredicted RBP13.62□□□□□ -0.23
CNOT4-208ENST00000465721 EHMT1Q9H9B1 1298 aa13.62□□□□□ -0.23
CNOT4-208ENST00000465721 ZNF215Q9UL58 517 aaPredicted RBP13.62□□□□□ -0.23
CNOT4-208ENST00000465721 RWDD3Q9Y3V2 267 aa13.62□□□□□ -0.23
CNOT4-208ENST00000465721 VPS13AQ96RL7 3174 aa13.62□□□□□ -0.23
CNOT4-208ENST00000465721 NCK2O43639 380 aa13.61□□□□□ -0.23
CNOT4-208ENST00000465721 MMP1P03956 469 aa13.61□□□□□ -0.23
CNOT4-208ENST00000465721 GHRP10912 638 aa13.61□□□□□ -0.23
CNOT4-208ENST00000465721 GTF2F1P35269 517 aaKnown RBP eCLIP13.61□□□□□ -0.23
CNOT4-208ENST00000465721 TRAF1Q13077 416 aa13.61□□□□□ -0.23
CNOT4-208ENST00000465721 LPIN1Q14693 890 aa13.61□□□□□ -0.23
CNOT4-208ENST00000465721 HERC4Q5GLZ8 1057 aaPredicted RBP13.61□□□□□ -0.23
CNOT4-208ENST00000465721 ZNF689Q96CS4 500 aaPredicted RBP13.61□□□□□ -0.23
CNOT4-208ENST00000465721 POP1Q99575 1024 aaKnown RBP13.61□□□□□ -0.23
CNOT4-208ENST00000465721 SENP2Q9HC62 589 aa13.61□□□□□ -0.23
CNOT4-208ENST00000465721 MUTYHQ9UIF7 546 aa13.61□□□□□ -0.23
CNOT4-208ENST00000465721 MYH9P35579 1960 aaKnown RBP13.61□□□□□ -0.23
CNOT4-208ENST00000465721 NRCAMQ92823 1304 aa13.61□□□□□ -0.23
CNOT4-208ENST00000465721 PNMA6FA0A0J9YX94 578 aa13.6□□□□□ -0.23
CNOT4-208ENST00000465721 HIP1O00291 1037 aa13.6□□□□□ -0.23
CNOT4-208ENST00000465721 LINC01565O15544 149 aa13.6□□□□□ -0.23
CNOT4-208ENST00000465721 SP4Q02446 784 aa13.6□□□□□ -0.23
CNOT4-208ENST00000465721 SMAD4Q13485 552 aaKnown RBP13.6□□□□□ -0.23
CNOT4-208ENST00000465721 CAMK1Q14012 370 aa13.6□□□□□ -0.23
CNOT4-208ENST00000465721 UTP14CQ5TAP6 766 aaKnown RBP13.6□□□□□ -0.23
CNOT4-208ENST00000465721 CHD1LQ86WJ1 897 aa13.6□□□□□ -0.23
CNOT4-208ENST00000465721 LINC01599Q8WXQ3 324 aa13.6□□□□□ -0.23
CNOT4-208ENST00000465721 SENP7Q9BQF6 1050 aa13.6□□□□□ -0.23
CNOT4-208ENST00000465721 UPF3BQ9BZI7 483 aaKnown RBP13.6□□□□□ -0.23
CNOT4-208ENST00000465721 RTEL1Q9NZ71 1219 aa13.6□□□□□ -0.23
CNOT4-208ENST00000465721 ZFHX2Q9C0A1 2572 aaPredicted RBP13.6□□□□□ -0.23
CNOT4-208ENST00000465721 MYO10Q9HD67 2058 aa13.59□□□□□ -0.23
CNOT4-208ENST00000465721 CSPG5O95196 566 aa13.59□□□□□ -0.23
CNOT4-208ENST00000465721 TROAPQ12815 778 aa13.59□□□□□ -0.23
CNOT4-208ENST00000465721 FBXO47Q5MNV8 452 aa13.59□□□□□ -0.23
CNOT4-208ENST00000465721 PCNX4Q63HM2 1172 aa13.59□□□□□ -0.23
CNOT4-208ENST00000465721 B4GALNT3Q6L9W6 998 aa13.59□□□□□ -0.23
CNOT4-208ENST00000465721 TAF2Q6P1X5 1199 aa13.59□□□□□ -0.23
CNOT4-208ENST00000465721 MSLNLQ96KJ4 702 aa13.59□□□□□ -0.23
CNOT4-208ENST00000465721 CD207Q9UJ71 328 aa13.59□□□□□ -0.23
CNOT4-208ENST00000465721 RIF1Q5UIP0 2472 aaKnown RBP13.59□□□□□ -0.23
CNOT4-208ENST00000465721 WDR87Q6ZQQ6 2873 aa13.59□□□□□ -0.23
CNOT4-208ENST00000465721 PLXNA3P51805 1871 aa13.59□□□□□ -0.23
CNOT4-208ENST00000465721 MBLAC1A4D2B0 266 aaPredicted RBP13.58□□□□□ -0.24
CNOT4-208ENST00000465721 ENPP3O14638 875 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms