RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 SLC26A6Q9BXS9 759 aa24.89■■□□□ 1.58
LIME1-203ENST00000465591 RNF26Q9BY78 433 aaPredicted RBP24.89■■□□□ 1.58
LIME1-203ENST00000465591 FTOQ9C0B1 505 aaKnown RBP eCLIP24.89■■□□□ 1.58
LIME1-203ENST00000465591 ZNF576Q9H609 170 aa24.89■■□□□ 1.58
LIME1-203ENST00000465591 SETD4Q9NVD3 440 aa24.89■■□□□ 1.58
LIME1-203ENST00000465591 CEP55Q53EZ4 464 aa24.88■■□□□ 1.57
LIME1-203ENST00000465591 CRYGNQ8WXF5 182 aa24.88■■□□□ 1.57
LIME1-203ENST00000465591 ATP6V0A1Q93050 837 aa24.88■■□□□ 1.57
LIME1-203ENST00000465591 GLT8D2Q9H1C3 349 aa24.88■■□□□ 1.57
LIME1-203ENST00000465591 MAFGO15525 162 aa24.87■■□□□ 1.57
LIME1-203ENST00000465591 MYOGP15173 224 aa24.87■■□□□ 1.57
LIME1-203ENST00000465591 ARHGAP4P98171 946 aa24.87■■□□□ 1.57
LIME1-203ENST00000465591 ITGB3BPQ13352 177 aaPredicted RBP24.87■■□□□ 1.57
LIME1-203ENST00000465591 RASGRP4Q8TDF6 673 aa24.87■■□□□ 1.57
LIME1-203ENST00000465591 SEPT1Q8WYJ6 367 aa24.87■■□□□ 1.57
LIME1-203ENST00000465591 NKX2-4Q9H2Z4 354 aa24.87■■□□□ 1.57
LIME1-203ENST00000465591 MEIS1O00470 390 aa24.86■■□□□ 1.57
LIME1-203ENST00000465591 CXCL10P02778 98 aa24.86■■□□□ 1.57
LIME1-203ENST00000465591 ATP2A2P16615 1042 aaKnown RBP24.86■■□□□ 1.57
LIME1-203ENST00000465591 ADAM17P78536 824 aa24.86■■□□□ 1.57
LIME1-203ENST00000465591 PCYT2Q99447 389 aa24.86■■□□□ 1.57
LIME1-203ENST00000465591 AGO4Q9HCK5 861 aaKnown RBP24.86■■□□□ 1.57
LIME1-203ENST00000465591 PDRG1Q9NUG6 133 aa24.86■■□□□ 1.57
LIME1-203ENST00000465591 VPS54Q9P1Q0 977 aa24.86■■□□□ 1.57
LIME1-203ENST00000465591 ZNF215Q9UL58 517 aaPredicted RBP24.86■■□□□ 1.57
LIME1-203ENST00000465591 FAM86B1E9PN63 330 aa24.85■■□□□ 1.57
LIME1-203ENST00000465591 FAM86B2P0C5J1 330 aa24.85■■□□□ 1.57
LIME1-203ENST00000465591 ACTN1P12814 892 aa24.85■■□□□ 1.57
LIME1-203ENST00000465591 AKAP17AQ02040 695 aaKnown RBP24.85■■□□□ 1.57
LIME1-203ENST00000465591 STK3Q13188 491 aa24.85■■□□□ 1.57
LIME1-203ENST00000465591 RAB30Q15771 203 aa24.85■■□□□ 1.57
LIME1-203ENST00000465591 LMBR1Q8WVP7 490 aa24.85■■□□□ 1.57
LIME1-203ENST00000465591 ZNF274Q96GC6 653 aaPredicted RBP24.85■■□□□ 1.57
LIME1-203ENST00000465591 OSBPL7Q9BZF2 842 aa24.85■■□□□ 1.57
LIME1-203ENST00000465591 C6orf50Q9HD87 102 aa24.85■■□□□ 1.57
LIME1-203ENST00000465591 JPH1Q9HDC5 661 aaPredicted RBP24.85■■□□□ 1.57
LIME1-203ENST00000465591 MSRAQ9UJ68 235 aa24.85■■□□□ 1.57
LIME1-203ENST00000465591 EYSQ5T1H1 3165 aa24.84■■□□□ 1.57
LIME1-203ENST00000465591 MARK3P27448 753 aa24.84■■□□□ 1.57
LIME1-203ENST00000465591 THPOP40225 353 aa24.84■■□□□ 1.57
LIME1-203ENST00000465591 REXO1Q8N1G1 1221 aaKnown RBP24.84■■□□□ 1.57
LIME1-203ENST00000465591 SLC9A2Q9UBY0 812 aa24.84■■□□□ 1.57
LIME1-203ENST00000465591 NFASCO94856 1347 aa24.84■■□□□ 1.57
LIME1-203ENST00000465591 CHD7Q9P2D1 2997 aa24.84■■□□□ 1.57
LIME1-203ENST00000465591 IGLV3-22A0A075B6J6 115 aa24.83■■□□□ 1.57
LIME1-203ENST00000465591 CCDC12Q8WUD4 166 aaPredicted RBP24.83■■□□□ 1.57
LIME1-203ENST00000465591 UIMC1Q96RL1 719 aa24.83■■□□□ 1.57
LIME1-203ENST00000465591 SIP14410 1827 aa24.82■■□□□ 1.56
LIME1-203ENST00000465591 EDIL3O43854 480 aa24.82■■□□□ 1.56
LIME1-203ENST00000465591 DTNBO60941 627 aa24.82■■□□□ 1.56
LIME1-203ENST00000465591 LGR5O75473 907 aa24.82■■□□□ 1.56
LIME1-203ENST00000465591 CYP3A4P08684 503 aa24.82■■□□□ 1.56
LIME1-203ENST00000465591 ZNF76P36508 570 aa24.82■■□□□ 1.56
LIME1-203ENST00000465591 ACTR2P61160 394 aa24.82■■□□□ 1.56
LIME1-203ENST00000465591 CNKSR3Q6P9H4 555 aa24.82■■□□□ 1.56
LIME1-203ENST00000465591 NIPA1Q7RTP0 329 aa24.82■■□□□ 1.56
LIME1-203ENST00000465591 MICAL3Q7RTP6 2002 aa24.82■■□□□ 1.56
LIME1-203ENST00000465591 PLA2G4DQ86XP0 818 aa24.82■■□□□ 1.56
LIME1-203ENST00000465591 PCDHA11Q9Y5I1 949 aa24.82■■□□□ 1.56
LIME1-203ENST00000465591 EMSYQ7Z589 1322 aa24.82■■□□□ 1.56
LIME1-203ENST00000465591 RSPH10B2B2RC85 870 aa24.81■■□□□ 1.56
LIME1-203ENST00000465591 BAIAP3O94812 1187 aa24.81■■□□□ 1.56
LIME1-203ENST00000465591 PARNO95453 639 aaKnown RBP24.81■■□□□ 1.56
LIME1-203ENST00000465591 CCNE2O96020 404 aa24.81■■□□□ 1.56
LIME1-203ENST00000465591 CTSHP09668 335 aa24.81■■□□□ 1.56
LIME1-203ENST00000465591 RSPH10BP0C881 870 aa24.81■■□□□ 1.56
LIME1-203ENST00000465591 FOSL2P15408 326 aa24.81■■□□□ 1.56
LIME1-203ENST00000465591 GNA11P29992 359 aa24.81■■□□□ 1.56
LIME1-203ENST00000465591 WDR5P61964 334 aaKnown RBP24.81■■□□□ 1.56
LIME1-203ENST00000465591 RUFY4Q6ZNE9 571 aa24.81■■□□□ 1.56
LIME1-203ENST00000465591 TMCO2Q7Z6W1 182 aaPredicted RBP24.81■■□□□ 1.56
LIME1-203ENST00000465591 SLC17A8Q8NDX2 589 aa24.81■■□□□ 1.56
LIME1-203ENST00000465591 GLG1Q92896 1179 aa24.81■■□□□ 1.56
LIME1-203ENST00000465591 AIFM3Q96NN9 605 aa24.81■■□□□ 1.56
LIME1-203ENST00000465591 SLC9A7Q96T83 725 aa24.81■■□□□ 1.56
LIME1-203ENST00000465591 SDF4Q9BRK5 362 aa24.81■■□□□ 1.56
LIME1-203ENST00000465591 SMARCAD1Q9H4L7 1026 aa24.81■■□□□ 1.56
LIME1-203ENST00000465591 PRDM12Q9H4Q4 367 aa24.81■■□□□ 1.56
LIME1-203ENST00000465591 ERAP1Q9NZ08 941 aa24.81■■□□□ 1.56
LIME1-203ENST00000465591 NRCAMQ92823 1304 aa24.81■■□□□ 1.56
LIME1-203ENST00000465591 DDX39AO00148 427 aaKnown RBP24.8■■□□□ 1.56
LIME1-203ENST00000465591 DHX15O43143 795 aaKnown RBP24.8■■□□□ 1.56
LIME1-203ENST00000465591 SEC24BO95487 1268 aa24.8■■□□□ 1.56
LIME1-203ENST00000465591 GNAT1P11488 350 aa24.8■■□□□ 1.56
LIME1-203ENST00000465591 DEFB103AP81534 67 aa24.8■■□□□ 1.56
LIME1-203ENST00000465591 SSRP1Q08945 709 aaKnown RBP24.8■■□□□ 1.56
LIME1-203ENST00000465591 PPFIA1Q13136 1202 aa24.8■■□□□ 1.56
LIME1-203ENST00000465591 CCDC148Q8NFR7 591 aa24.8■■□□□ 1.56
LIME1-203ENST00000465591 ZBTB10Q96DT7 871 aa24.8■■□□□ 1.56
LIME1-203ENST00000465591 TPCN1Q9ULQ1 816 aa24.8■■□□□ 1.56
LIME1-203ENST00000465591 WDR81Q562E7 1941 aa24.79■■□□□ 1.56
LIME1-203ENST00000465591 ARHGEF15O94989 841 aa24.79■■□□□ 1.56
LIME1-203ENST00000465591 ANAPC15P60006 121 aa24.79■■□□□ 1.56
LIME1-203ENST00000465591 SCRN1Q12765 414 aa24.79■■□□□ 1.56
LIME1-203ENST00000465591 GRIK4Q16099 956 aa24.79■■□□□ 1.56
LIME1-203ENST00000465591 MARCH8Q5T0T0 291 aa24.79■■□□□ 1.56
LIME1-203ENST00000465591 HERC6Q8IVU3 1022 aa24.79■■□□□ 1.56
LIME1-203ENST00000465591 MAFAQ8NHW3 353 aaPredicted RBP24.79■■□□□ 1.56
LIME1-203ENST00000465591 PHOSPHO2Q8TCD6 241 aa24.79■■□□□ 1.56
LIME1-203ENST00000465591 SLC28A3Q9HAS3 691 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms