RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 SMARCAD1Q9H4L7 1026 aa15.51■□□□□ 0.07
LIMD1-203ENST00000465039 TUT1Q9H6E5 874 aaKnown RBP15.51■□□□□ 0.07
LIMD1-203ENST00000465039 ERAP1Q9NZ08 941 aa15.51■□□□□ 0.07
LIMD1-203ENST00000465039 DOCK5Q9H7D0 1870 aa15.5■□□□□ 0.07
LIMD1-203ENST00000465039 GRIN2DO15399 1336 aa15.5■□□□□ 0.07
LIMD1-203ENST00000465039 WDR64B1ANS9 1081 aa15.5■□□□□ 0.07
LIMD1-203ENST00000465039 CCNT1O60563 726 aaKnown RBP15.5■□□□□ 0.07
LIMD1-203ENST00000465039 GAS7O60861 476 aa15.5■□□□□ 0.07
LIMD1-203ENST00000465039 PSMD10O75832 226 aa15.5■□□□□ 0.07
LIMD1-203ENST00000465039 CD4P01730 458 aa15.5■□□□□ 0.07
LIMD1-203ENST00000465039 HOXC8P31273 242 aa15.5■□□□□ 0.07
LIMD1-203ENST00000465039 ATN1P54259 1190 aaPredicted RBP15.5■□□□□ 0.07
LIMD1-203ENST00000465039 TLE2Q04725 743 aa15.5■□□□□ 0.07
LIMD1-203ENST00000465039 MFSD10Q14728 455 aa15.5■□□□□ 0.07
LIMD1-203ENST00000465039 RILPL1Q5EBL4 403 aa15.5■□□□□ 0.07
LIMD1-203ENST00000465039 LRCH2Q5VUJ6 765 aa15.5■□□□□ 0.07
LIMD1-203ENST00000465039 LARP1BQ659C4 914 aaKnown RBP15.5■□□□□ 0.07
LIMD1-203ENST00000465039 B3GNT9Q6UX72 402 aa15.5■□□□□ 0.07
LIMD1-203ENST00000465039 BRAPQ7Z569 592 aa15.5■□□□□ 0.07
LIMD1-203ENST00000465039 TEKT3Q9BXF9 490 aa15.5■□□□□ 0.07
LIMD1-203ENST00000465039 AZI2Q9H6S1 392 aa15.5■□□□□ 0.07
LIMD1-203ENST00000465039 GSTTP1A0A1W2PQM5 241 aa15.49■□□□□ 0.07
LIMD1-203ENST00000465039 KIAA0355O15063 1070 aa15.49■□□□□ 0.07
LIMD1-203ENST00000465039 NEMFO60524 1076 aa15.49■□□□□ 0.07
LIMD1-203ENST00000465039 RPLP2P05387 115 aaKnown RBP15.49■□□□□ 0.07
LIMD1-203ENST00000465039 CLTBP09497 229 aa15.49■□□□□ 0.07
LIMD1-203ENST00000465039 ZNF286BP0CG31 522 aa15.49■□□□□ 0.07
LIMD1-203ENST00000465039 PSEN2P49810 448 aa15.49■□□□□ 0.07
LIMD1-203ENST00000465039 GUCY1B3Q02153 619 aa15.49■□□□□ 0.07
LIMD1-203ENST00000465039 PPP2R5CQ13362 524 aa15.49■□□□□ 0.07
LIMD1-203ENST00000465039 KIAA0753Q2KHM9 967 aa15.49■□□□□ 0.07
LIMD1-203ENST00000465039 NBPF20Q3BBV1 942 aa15.49■□□□□ 0.07
LIMD1-203ENST00000465039 EARS2Q5JPH6 523 aaKnown RBP15.49■□□□□ 0.07
LIMD1-203ENST00000465039 FAM160B1Q5W0V3 765 aa15.49■□□□□ 0.07
LIMD1-203ENST00000465039 MIS18BP1Q6P0N0 1132 aa15.49■□□□□ 0.07
LIMD1-203ENST00000465039 ABHD15Q6UXT9 468 aa15.49■□□□□ 0.07
LIMD1-203ENST00000465039 PRKAG2Q9UGJ0 569 aa15.49■□□□□ 0.07
LIMD1-203ENST00000465039 GTF2IRD1Q9UHL9 959 aa15.49■□□□□ 0.07
LIMD1-203ENST00000465039 TBX21Q9UL17 535 aa15.49■□□□□ 0.07
LIMD1-203ENST00000465039 ATP11BQ9Y2G3 1177 aa15.49■□□□□ 0.07
LIMD1-203ENST00000465039 PCDHA10Q9Y5I2 948 aa15.49■□□□□ 0.07
LIMD1-203ENST00000465039 LAD1O00515 517 aa15.48■□□□□ 0.07
LIMD1-203ENST00000465039 SLC37A4O43826 429 aa15.48■□□□□ 0.07
LIMD1-203ENST00000465039 DTNBO60941 627 aa15.48■□□□□ 0.07
LIMD1-203ENST00000465039 BAG4O95429 457 aaKnown RBP15.48■□□□□ 0.07
LIMD1-203ENST00000465039 CCNE2O96020 404 aa15.48■□□□□ 0.07
LIMD1-203ENST00000465039 PSAPP07602 524 aa15.48■□□□□ 0.07
LIMD1-203ENST00000465039 GNAT1P11488 350 aa15.48■□□□□ 0.07
LIMD1-203ENST00000465039 PRPF38BQ5VTL8 546 aaKnown RBP15.48■□□□□ 0.07
LIMD1-203ENST00000465039 C7orf61Q8IZ16 206 aa15.48■□□□□ 0.07
LIMD1-203ENST00000465039 C7orf31Q8N865 590 aa15.48■□□□□ 0.07
LIMD1-203ENST00000465039 BCAS3Q9H6U6 928 aa15.48■□□□□ 0.07
LIMD1-203ENST00000465039 PDLIM7Q9NR12 457 aa15.48■□□□□ 0.07
LIMD1-203ENST00000465039 PKD2L1Q9P0L9 805 aa15.48■□□□□ 0.07
LIMD1-203ENST00000465039 NRCAMQ92823 1304 aa15.47■□□□□ 0.07
LIMD1-203ENST00000465039 FAM205CA6NFA0 338 aa15.47■□□□□ 0.07
LIMD1-203ENST00000465039 PITPNM1O00562 1244 aa15.47■□□□□ 0.07
LIMD1-203ENST00000465039 PQBP1O60828 265 aaKnown RBP15.47■□□□□ 0.07
LIMD1-203ENST00000465039 HSP90AA1P07900 732 aaKnown RBP15.47■□□□□ 0.07
LIMD1-203ENST00000465039 PSMC6P62333 389 aa15.47■□□□□ 0.07
LIMD1-203ENST00000465039 RBL2Q08999 1139 aa15.47■□□□□ 0.07
LIMD1-203ENST00000465039 FAAP100Q0VG06 881 aa15.47■□□□□ 0.07
LIMD1-203ENST00000465039 GLG1Q92896 1179 aa15.47■□□□□ 0.07
LIMD1-203ENST00000465039 FAM167AQ96KS9 214 aa15.47■□□□□ 0.07
LIMD1-203ENST00000465039 IGSF9BQ9UPX0 1349 aa15.46■□□□□ 0.07
LIMD1-203ENST00000465039 LTBP2Q14767 1821 aa15.46■□□□□ 0.07
LIMD1-203ENST00000465039 KIF28PB7ZC32 967 aa15.46■□□□□ 0.07
LIMD1-203ENST00000465039 DKC1O60832 514 aaKnown RBP eCLIP15.46■□□□□ 0.07
LIMD1-203ENST00000465039 CAND2O75155 1236 aa15.46■□□□□ 0.07
LIMD1-203ENST00000465039 SYT1P21579 422 aa15.46■□□□□ 0.07
LIMD1-203ENST00000465039 STAT5BP51692 787 aa15.46■□□□□ 0.07
LIMD1-203ENST00000465039 FOSBP53539 338 aa15.46■□□□□ 0.07
LIMD1-203ENST00000465039 SP4Q02446 784 aa15.46■□□□□ 0.07
LIMD1-203ENST00000465039 BECN1Q14457 450 aa15.46■□□□□ 0.07
LIMD1-203ENST00000465039 CALCRLQ16602 461 aa15.46■□□□□ 0.07
LIMD1-203ENST00000465039 TTC38Q5R3I4 469 aa15.46■□□□□ 0.07
LIMD1-203ENST00000465039 POTEDQ86YR6 584 aa15.46■□□□□ 0.07
LIMD1-203ENST00000465039 CCDC155Q8N6L0 562 aa15.46■□□□□ 0.07
LIMD1-203ENST00000465039 HAS1Q92839 578 aa15.46■□□□□ 0.07
LIMD1-203ENST00000465039 ATP6V0A1Q93050 837 aa15.46■□□□□ 0.07
LIMD1-203ENST00000465039 MTMR9Q96QG7 549 aa15.46■□□□□ 0.07
LIMD1-203ENST00000465039 DISC1Q9NRI5 854 aa15.46■□□□□ 0.07
LIMD1-203ENST00000465039 VAV3Q9UKW4 847 aa15.46■□□□□ 0.07
LIMD1-203ENST00000465039 MAFBQ9Y5Q3 323 aaPredicted RBP15.46■□□□□ 0.07
LIMD1-203ENST00000465039 COL1A2P08123 1366 aa15.46■□□□□ 0.07
LIMD1-203ENST00000465039 RRN3P2A6NIE6 340 aa15.45■□□□□ 0.06
LIMD1-203ENST00000465039 B4GALT4O60513 344 aa15.45■□□□□ 0.06
LIMD1-203ENST00000465039 PARNO95453 639 aaKnown RBP15.45■□□□□ 0.06
LIMD1-203ENST00000465039 BMP15O95972 392 aa15.45■□□□□ 0.06
LIMD1-203ENST00000465039 FAM47CQ5HY64 1035 aa15.45■□□□□ 0.06
LIMD1-203ENST00000465039 MCTP1Q6DN14 999 aa15.45■□□□□ 0.06
LIMD1-203ENST00000465039 TRIM50Q86XT4 487 aa15.45■□□□□ 0.06
LIMD1-203ENST00000465039 CAGE1Q8TC20 777 aa15.45■□□□□ 0.06
LIMD1-203ENST00000465039 NEK9Q8TD19 979 aa15.45■□□□□ 0.06
LIMD1-203ENST00000465039 ATP8B4Q8TF62 1192 aa15.45■□□□□ 0.06
LIMD1-203ENST00000465039 PCYT2Q99447 389 aa15.45■□□□□ 0.06
LIMD1-203ENST00000465039 ZNF302Q9NR11 478 aa15.45■□□□□ 0.06
LIMD1-203ENST00000465039 TMEM39AQ9NV64 488 aa15.45■□□□□ 0.06
LIMD1-203ENST00000465039 MYH9P35579 1960 aaKnown RBP15.45■□□□□ 0.06
LIMD1-203ENST00000465039 BACH1O14867 736 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms