RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 VPS11Q9H270 941 aa7.01□□□□□ -1.29
UBR4-209ENST00000465036 SLC4A7Q9Y6M7 1214 aa7.01□□□□□ -1.29
UBR4-209ENST00000465036 BAZ1AQ9NRL2 1556 aaPredicted RBP7□□□□□ -1.29
UBR4-209ENST00000465036 A0A1W2PQU0 124 aa7□□□□□ -1.29
UBR4-209ENST00000465036 UNCXA6NJT0 531 aa7□□□□□ -1.29
UBR4-209ENST00000465036 DLX3O60479 287 aa7□□□□□ -1.29
UBR4-209ENST00000465036 GJB6O95452 261 aa7□□□□□ -1.29
UBR4-209ENST00000465036 CNOT4O95628 575 aaKnown RBP7□□□□□ -1.29
UBR4-209ENST00000465036 SLPIP03973 132 aa7□□□□□ -1.29
UBR4-209ENST00000465036 FAHP16930 419 aa7□□□□□ -1.29
UBR4-209ENST00000465036 HABP4Q5JVS0 413 aaKnown RBP7□□□□□ -1.29
UBR4-209ENST00000465036 ZNF585AQ6P3V2 769 aa7□□□□□ -1.29
UBR4-209ENST00000465036 RALYLQ86SE5 291 aaKnown RBP7□□□□□ -1.29
UBR4-209ENST00000465036 REXO1L1PQ8IX06 675 aa7□□□□□ -1.29
UBR4-209ENST00000465036 UHMK1Q8TAS1 419 aaKnown RBP7□□□□□ -1.29
UBR4-209ENST00000465036 PTPN18Q99952 460 aa7□□□□□ -1.29
UBR4-209ENST00000465036 ZFYVE21Q9BQ24 234 aa7□□□□□ -1.29
UBR4-209ENST00000465036 JAM3Q9BX67 310 aa7□□□□□ -1.29
UBR4-209ENST00000465036 SLC27A2O14975 620 aa6.99□□□□□ -1.29
UBR4-209ENST00000465036 MSCO60682 206 aa6.99□□□□□ -1.29
UBR4-209ENST00000465036 EPHA5P54756 1037 aa6.99□□□□□ -1.29
UBR4-209ENST00000465036 GNL2Q13823 731 aaKnown RBP6.99□□□□□ -1.29
UBR4-209ENST00000465036 PAN2Q504Q3 1202 aaKnown RBP6.99□□□□□ -1.29
UBR4-209ENST00000465036 DCAF4Q8WV16 495 aa6.99□□□□□ -1.29
UBR4-209ENST00000465036 MRIQ9BWK5 157 aa6.99□□□□□ -1.29
UBR4-209ENST00000465036 KATNBL1Q9H079 304 aa6.99□□□□□ -1.29
UBR4-209ENST00000465036 KCND1Q9NSA2 647 aa6.99□□□□□ -1.29
UBR4-209ENST00000465036 RBPJLQ9UBG7 517 aa6.99□□□□□ -1.29
UBR4-209ENST00000465036 ENO2P09104 434 aaPredicted RBP6.98□□□□□ -1.29
UBR4-209ENST00000465036 SPIRE1Q08AE8 756 aa6.98□□□□□ -1.29
UBR4-209ENST00000465036 TUSC3Q13454 348 aa6.98□□□□□ -1.29
UBR4-209ENST00000465036 HSP90AA2PQ14568 343 aaPredicted RBP6.98□□□□□ -1.29
UBR4-209ENST00000465036 LBX2Q6XYB7 198 aa6.98□□□□□ -1.29
UBR4-209ENST00000465036 IER2Q9BTL4 223 aa6.98□□□□□ -1.29
UBR4-209ENST00000465036 PHF20Q9BVI0 1012 aa6.98□□□□□ -1.29
UBR4-209ENST00000465036 FBXO21O94952 628 aa6.97□□□□□ -1.29
UBR4-209ENST00000465036 AMHP03971 560 aa6.97□□□□□ -1.29
UBR4-209ENST00000465036 CKMP06732 381 aa6.97□□□□□ -1.29
UBR4-209ENST00000465036 FGRP09769 529 aa6.97□□□□□ -1.29
UBR4-209ENST00000465036 CSF2RBP32927 897 aa6.97□□□□□ -1.29
UBR4-209ENST00000465036 SKIDA1Q1XH10 827 aa6.97□□□□□ -1.29
UBR4-209ENST00000465036 KIZQ2M2Z5 673 aa6.97□□□□□ -1.29
UBR4-209ENST00000465036 HS1BP3Q53T59 392 aa6.97□□□□□ -1.29
UBR4-209ENST00000465036 PCED1AQ9H1Q7 454 aa6.97□□□□□ -1.29
UBR4-209ENST00000465036 ZNF408Q9H9D4 720 aa6.97□□□□□ -1.29
UBR4-209ENST00000465036 SMARCA2P51531 1590 aa6.96□□□□□ -1.29
UBR4-209ENST00000465036 FGFR1P11362 822 aa6.96□□□□□ -1.3
UBR4-209ENST00000465036 GRK2P25098 689 aa6.96□□□□□ -1.3
UBR4-209ENST00000465036 GRK3P35626 688 aa6.96□□□□□ -1.3
UBR4-209ENST00000465036 GRIN1Q05586 938 aa6.96□□□□□ -1.3
UBR4-209ENST00000465036 CD276Q5ZPR3 534 aa6.96□□□□□ -1.3
UBR4-209ENST00000465036 PALM2Q8IXS6 379 aa6.96□□□□□ -1.3
UBR4-209ENST00000465036 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.96□□□□□ -1.31e-23■□□□□ 11.1
UBR4-209ENST00000465036 SLITRK6Q9H5Y7 841 aa6.96□□□□□ -1.3
UBR4-209ENST00000465036 ARHGAP20Q9P2F6 1191 aa6.96□□□□□ -1.3
UBR4-209ENST00000465036 PPARGC1AQ9UBK2 798 aaKnown RBP6.96□□□□□ -1.3
UBR4-209ENST00000465036 ZFP69BQ9UJL9 534 aa6.96□□□□□ -1.3
UBR4-209ENST00000465036 HMGXB3Q12766 1538 aa6.96□□□□□ -1.3
UBR4-209ENST00000465036 PEG3Q9GZU2 1588 aa6.95□□□□□ -1.3
UBR4-209ENST00000465036 IQCA1LA6NCM1 817 aa6.95□□□□□ -1.3
UBR4-209ENST00000465036 PFKPQ01813 784 aa6.95□□□□□ -1.3
UBR4-209ENST00000465036 SPDYAQ5MJ70 313 aa6.95□□□□□ -1.3
UBR4-209ENST00000465036 TCTN3Q6NUS6 607 aa6.95□□□□□ -1.3
UBR4-209ENST00000465036 USP53Q70EK8 1073 aa6.95□□□□□ -1.3
UBR4-209ENST00000465036 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.95□□□□□ -1.3
UBR4-209ENST00000465036 ZFPM1Q8IX07 1006 aa6.95□□□□□ -1.3
UBR4-209ENST00000465036 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.95□□□□□ -1.3
UBR4-209ENST00000465036 BAZ1BQ9UIG0 1483 aaKnown RBP6.95□□□□□ -1.3
UBR4-209ENST00000465036 ZNF839A8K0R7 811 aa6.94□□□□□ -1.3
UBR4-209ENST00000465036 GNAT1P11488 350 aa6.94□□□□□ -1.3
UBR4-209ENST00000465036 ERCC5P28715 1186 aaPredicted RBP6.94□□□□□ -1.3
UBR4-209ENST00000465036 GPR85P60893 370 aa6.94□□□□□ -1.3
UBR4-209ENST00000465036 IFNL2Q8IZJ0 200 aa6.94□□□□□ -1.3
UBR4-209ENST00000465036 EDAQ92838 391 aa6.94□□□□□ -1.3
UBR4-209ENST00000465036 LMF1Q96S06 567 aa6.94□□□□□ -1.3
UBR4-209ENST00000465036 AARSD1Q9BTE6 412 aaKnown RBP6.94□□□□□ -1.3
UBR4-209ENST00000465036 DSEQ9UL01 958 aa6.94□□□□□ -1.3
UBR4-209ENST00000465036 TELO2Q9Y4R8 837 aa6.94□□□□□ -1.3
UBR4-209ENST00000465036 WIZO95785 1651 aa6.93□□□□□ -1.3
UBR4-209ENST00000465036 H0Y858 1186 aa6.93□□□□□ -1.3
UBR4-209ENST00000465036 FOXS1O43638 330 aa6.93□□□□□ -1.3
UBR4-209ENST00000465036 CUTAO60888 179 aa6.93□□□□□ -1.3
UBR4-209ENST00000465036 PRKD1Q15139 912 aaPredicted RBP6.93□□□□□ -1.3
UBR4-209ENST00000465036 STYK1Q6J9G0 422 aa6.93□□□□□ -1.3
UBR4-209ENST00000465036 KCTD1Q719H9 257 aa6.93□□□□□ -1.3
UBR4-209ENST00000465036 DPH6Q7L8W6 267 aa6.93□□□□□ -1.3
UBR4-209ENST00000465036 IFNL3Q8IZI9 196 aa6.93□□□□□ -1.3
UBR4-209ENST00000465036 STPG3Q8N7X2 389 aa6.93□□□□□ -1.3
UBR4-209ENST00000465036 MENTQ9BUN1 341 aa6.93□□□□□ -1.3
UBR4-209ENST00000465036 NKRFO15226 690 aaKnown RBP eCLIP6.92□□□□□ -1.3
UBR4-209ENST00000465036 IL18BPO95998 194 aa6.92□□□□□ -1.3
UBR4-209ENST00000465036 ARID5AQ03989 594 aa6.92□□□□□ -1.3
UBR4-209ENST00000465036 USP10Q14694 798 aaKnown RBP6.92□□□□□ -1.3
UBR4-209ENST00000465036 DDR2Q16832 855 aa6.92□□□□□ -1.3
UBR4-209ENST00000465036 PHF19Q5T6S3 580 aa6.92□□□□□ -1.3
UBR4-209ENST00000465036 RBM12BQ8IXT5 1001 aaKnown RBP6.92□□□□□ -1.3
UBR4-209ENST00000465036 ST13P5Q8NFI4 369 aaPredicted RBP6.92□□□□□ -1.3
UBR4-209ENST00000465036 OSBP2Q969R2 916 aa6.92□□□□□ -1.3
UBR4-209ENST00000465036 CARD11Q9BXL7 1154 aa6.92□□□□□ -1.3
UBR4-209ENST00000465036 ARHGEF4Q9NR80 690 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms