RNA–Protein interactions for RNA: ENST00000464451.5

SEC61A1-203, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 1,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-203ENST00000464451 DSG3P32926 999 aa13.48□□□□□ -0.25
SEC61A1-203ENST00000464451 SLC16A2P36021 539 aa13.48□□□□□ -0.25
SEC61A1-203ENST00000464451 MRPL12P52815 198 aaKnown RBP13.48□□□□□ -0.25
SEC61A1-203ENST00000464451 PMS1P54277 932 aaKnown RBP13.48□□□□□ -0.25
SEC61A1-203ENST00000464451 SNAP25P60880 206 aa13.48□□□□□ -0.25
SEC61A1-203ENST00000464451 ASIC1P78348 528 aa13.48□□□□□ -0.25
SEC61A1-203ENST00000464451 LACTBP83111 547 aaPredicted RBP13.48□□□□□ -0.25
SEC61A1-203ENST00000464451 PDE4DQ08499 809 aa13.48□□□□□ -0.25
SEC61A1-203ENST00000464451 MTF1Q14872 753 aa13.48□□□□□ -0.25
SEC61A1-203ENST00000464451 COBLL1Q53SF7 1204 aa13.48□□□□□ -0.25
SEC61A1-203ENST00000464451 COL13A1Q5TAT6 717 aaPredicted RBP13.48□□□□□ -0.25
SEC61A1-203ENST00000464451 PPP4R3AQ6IN85 833 aa13.48□□□□□ -0.25
SEC61A1-203ENST00000464451 TTI2Q6NXR4 508 aa13.48□□□□□ -0.25
SEC61A1-203ENST00000464451 RAD9BQ6WBX8 426 aa13.48□□□□□ -0.25
SEC61A1-203ENST00000464451 HOXC10Q9NYD6 342 aa13.48□□□□□ -0.25
SEC61A1-203ENST00000464451 STK17AQ9UEE5 414 aa13.48□□□□□ -0.25
SEC61A1-203ENST00000464451 ZSWIM8A7E2V4 1837 aa13.48□□□□□ -0.25
SEC61A1-203ENST00000464451 LGALS16A8MUM7 142 aa13.48□□□□□ -0.25
SEC61A1-203ENST00000464451 CNMDO75829 334 aa13.48□□□□□ -0.25
SEC61A1-203ENST00000464451 GCLCP48506 637 aaPredicted RBP13.48□□□□□ -0.25
SEC61A1-203ENST00000464451 PLS1Q14651 629 aa13.48□□□□□ -0.25
SEC61A1-203ENST00000464451 CNNM4Q6P4Q7 775 aa13.48□□□□□ -0.25
SEC61A1-203ENST00000464451 SV2BQ7L1I2 683 aa13.48□□□□□ -0.25
SEC61A1-203ENST00000464451 P2RX5Q93086 422 aa13.48□□□□□ -0.25
SEC61A1-203ENST00000464451 MTMR8Q96EF0 704 aa13.48□□□□□ -0.25
SEC61A1-203ENST00000464451 GMCL1Q96IK5 515 aa13.48□□□□□ -0.25
SEC61A1-203ENST00000464451 WDR24Q96S15 920 aa13.48□□□□□ -0.25
SEC61A1-203ENST00000464451 SLF1Q9BQI6 1058 aa13.48□□□□□ -0.25
SEC61A1-203ENST00000464451 GLT8D2Q9H1C3 349 aa13.48□□□□□ -0.25
SEC61A1-203ENST00000464451 ABHD10Q9NUJ1 306 aa13.48□□□□□ -0.25
SEC61A1-203ENST00000464451 SYNPO2Q9UMS6 1093 aa13.48□□□□□ -0.25
SEC61A1-203ENST00000464451 SLC37A4O43826 429 aa13.47□□□□□ -0.25
SEC61A1-203ENST00000464451 PPP1R11O60927 126 aaPredicted RBP13.47□□□□□ -0.25
SEC61A1-203ENST00000464451 TDP2O95551 362 aa13.47□□□□□ -0.25
SEC61A1-203ENST00000464451 CCNE1P24864 410 aa13.47□□□□□ -0.25
SEC61A1-203ENST00000464451 CLK2P49760 499 aaKnown RBP13.47□□□□□ -0.25
SEC61A1-203ENST00000464451 CYP26C1Q6V0L0 522 aa13.47□□□□□ -0.25
SEC61A1-203ENST00000464451 FAM114A1Q8IWE2 563 aa13.47□□□□□ -0.25
SEC61A1-203ENST00000464451 CSGALNACT2Q8N6G5 542 aa13.47□□□□□ -0.25
SEC61A1-203ENST00000464451 MB21D1Q8N884 522 aa13.47□□□□□ -0.25
SEC61A1-203ENST00000464451 MNS1Q8NEH6 495 aa13.47□□□□□ -0.25
SEC61A1-203ENST00000464451 GPRC5AQ8NFJ5 357 aa13.47□□□□□ -0.25
SEC61A1-203ENST00000464451 CDK5RAP3Q96JB5 506 aa13.47□□□□□ -0.25
SEC61A1-203ENST00000464451 MRPL44Q9H9J2 332 aaKnown RBP13.47□□□□□ -0.25
SEC61A1-203ENST00000464451 PRDM10Q9NQV6 1147 aa13.47□□□□□ -0.25
SEC61A1-203ENST00000464451 PPP1R9AQ9ULJ8 1098 aa13.47□□□□□ -0.25
SEC61A1-203ENST00000464451 EDIL3O43854 480 aa13.46□□□□□ -0.25
SEC61A1-203ENST00000464451 GCFC2P16383 781 aaKnown RBP13.46□□□□□ -0.25
SEC61A1-203ENST00000464451 PSMC4P43686 418 aa13.46□□□□□ -0.25
SEC61A1-203ENST00000464451 ERVK-9P63128 1117 aa13.46□□□□□ -0.25
SEC61A1-203ENST00000464451 ERVK-24P63145 666 aa13.46□□□□□ -0.25
SEC61A1-203ENST00000464451 STK4Q13043 487 aa13.46□□□□□ -0.25
SEC61A1-203ENST00000464451 GRB10Q13322 594 aa13.46□□□□□ -0.25
SEC61A1-203ENST00000464451 FAM110CQ1W6H9 321 aa13.46□□□□□ -0.25
SEC61A1-203ENST00000464451 ERCC6LQ2NKX8 1250 aa13.46□□□□□ -0.25
SEC61A1-203ENST00000464451 ZNF507Q8TCN5 953 aa13.46□□□□□ -0.25
SEC61A1-203ENST00000464451 NAP1L4Q99733 375 aaKnown RBP13.46□□□□□ -0.25
SEC61A1-203ENST00000464451 LRRC27Q9C0I9 530 aa13.46□□□□□ -0.25
SEC61A1-203ENST00000464451 PORCNQ9H237 461 aa13.46□□□□□ -0.25
SEC61A1-203ENST00000464451 PSTPIP2Q9H939 334 aa13.46□□□□□ -0.25
SEC61A1-203ENST00000464451 FEM1BQ9UK73 627 aa13.46□□□□□ -0.25
SEC61A1-203ENST00000464451 TRIM17Q9Y577 477 aa13.46□□□□□ -0.25
SEC61A1-203ENST00000464451 PVALEFA0A1B0GWK0 134 aa13.46□□□□□ -0.26
SEC61A1-203ENST00000464451 EFCAB8A8MWE9 144 aa13.46□□□□□ -0.26
SEC61A1-203ENST00000464451 VWA5AO00534 786 aa13.46□□□□□ -0.26
SEC61A1-203ENST00000464451 KIF5CO60282 957 aa13.46□□□□□ -0.26
SEC61A1-203ENST00000464451 KRT9P35527 623 aa13.46□□□□□ -0.26
SEC61A1-203ENST00000464451 DNM2P50570 870 aa13.46□□□□□ -0.26
SEC61A1-203ENST00000464451 STAT2P52630 851 aa13.46□□□□□ -0.26
SEC61A1-203ENST00000464451 KIF22Q14807 665 aa13.46□□□□□ -0.26
SEC61A1-203ENST00000464451 WDR78Q5VTH9 848 aa13.46□□□□□ -0.26
SEC61A1-203ENST00000464451 KRT79Q5XKE5 535 aa13.46□□□□□ -0.26
SEC61A1-203ENST00000464451 LBX2Q6XYB7 198 aa13.46□□□□□ -0.26
SEC61A1-203ENST00000464451 CPXCR1Q8N123 301 aa13.46□□□□□ -0.26
SEC61A1-203ENST00000464451 PRPF38AQ8NAV1 312 aaKnown RBP13.46□□□□□ -0.26
SEC61A1-203ENST00000464451 DCAF4Q8WV16 495 aa13.46□□□□□ -0.26
SEC61A1-203ENST00000464451 UBXN4Q92575 508 aa13.46□□□□□ -0.26
SEC61A1-203ENST00000464451 LARP4BQ92615 738 aaKnown RBP13.46□□□□□ -0.26
SEC61A1-203ENST00000464451 DUSP9Q99956 384 aaKnown RBP13.46□□□□□ -0.26
SEC61A1-203ENST00000464451 EFCC1Q9HA90 598 aa13.46□□□□□ -0.26
SEC61A1-203ENST00000464451 BLOC1S4Q9NUP1 217 aa13.46□□□□□ -0.26
SEC61A1-203ENST00000464451 MORF4L1Q9UBU8 362 aa13.46□□□□□ -0.26
SEC61A1-203ENST00000464451 DDX25Q9UHL0 483 aaKnown RBP13.46□□□□□ -0.26
SEC61A1-203ENST00000464451 RLFQ13129 1914 aa13.45□□□□□ -0.26
SEC61A1-203ENST00000464451 TMEM132BQ14DG7 1078 aa13.45□□□□□ -0.26
SEC61A1-203ENST00000464451 UBE2SQ16763 222 aa13.45□□□□□ -0.26
SEC61A1-203ENST00000464451 FBXO38Q6PIJ6 1188 aa13.45□□□□□ -0.26
SEC61A1-203ENST00000464451 UNC13DQ70J99 1090 aa13.45□□□□□ -0.26
SEC61A1-203ENST00000464451 LRRN4CLQ8ND94 238 aa13.45□□□□□ -0.26
SEC61A1-203ENST00000464451 PNMA5Q96PV4 448 aa13.45□□□□□ -0.26
SEC61A1-203ENST00000464451 LZTFL1Q9NQ48 299 aa13.45□□□□□ -0.26
SEC61A1-203ENST00000464451 OGFRQ9NZT2 677 aa13.45□□□□□ -0.26
SEC61A1-203ENST00000464451 RABGAP1Q9Y3P9 1069 aa13.45□□□□□ -0.26
SEC61A1-203ENST00000464451 MRFAP1Q9Y605 127 aa13.45□□□□□ -0.26
SEC61A1-203ENST00000464451 FCER1AP12319 257 aa13.44□□□□□ -0.26
SEC61A1-203ENST00000464451 TAL1P17542 331 aaPredicted RBP13.44□□□□□ -0.26
SEC61A1-203ENST00000464451 ANKRD40Q6AI12 368 aa13.44□□□□□ -0.26
SEC61A1-203ENST00000464451 CCDC174Q6PII3 467 aa13.44□□□□□ -0.26
SEC61A1-203ENST00000464451 OR8K1Q8NGG5 319 aa13.44□□□□□ -0.26
SEC61A1-203ENST00000464451 SNX29Q8TEQ0 813 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms