RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 TRAPPC10P48553 1259 aa21.42■■□□□ 1.02
LMNB1-204ENST00000463908 ITGA7Q13683 1181 aa21.42■■□□□ 1.02
LMNB1-204ENST00000463908 TTC38Q5R3I4 469 aa21.42■■□□□ 1.02
LMNB1-204ENST00000463908 LRCH2Q5VUJ6 765 aa21.42■■□□□ 1.02
LMNB1-204ENST00000463908 ABHD15Q6UXT9 468 aa21.42■■□□□ 1.02
LMNB1-204ENST00000463908 FERMT3Q86UX7 667 aa21.42■■□□□ 1.02
LMNB1-204ENST00000463908 C4orf32Q8N8J7 132 aa21.42■■□□□ 1.02
LMNB1-204ENST00000463908 FAM20AQ96MK3 541 aa21.42■■□□□ 1.02
LMNB1-204ENST00000463908 MTMR9Q96QG7 549 aa21.42■■□□□ 1.02
LMNB1-204ENST00000463908 TMEM60Q9H2L4 133 aa21.42■■□□□ 1.02
LMNB1-204ENST00000463908 IGKV6D-21A0A0A0MT36 114 aa21.41■■□□□ 1.02
LMNB1-204ENST00000463908 ARVCFO00192 962 aa21.41■■□□□ 1.02
LMNB1-204ENST00000463908 TBX3O15119 743 aa21.41■■□□□ 1.02
LMNB1-204ENST00000463908 F2P00734 622 aa21.41■■□□□ 1.02
LMNB1-204ENST00000463908 BECN1Q14457 450 aa21.41■■□□□ 1.02
LMNB1-204ENST00000463908 NBPF20Q3BBV1 942 aa21.41■■□□□ 1.02
LMNB1-204ENST00000463908 UTP14CQ5TAP6 766 aaKnown RBP21.41■■□□□ 1.02
LMNB1-204ENST00000463908 ZNF746Q6NUN9 644 aaPredicted RBP21.41■■□□□ 1.02
LMNB1-204ENST00000463908 PCDHB6Q9Y5E3 794 aa21.41■■□□□ 1.02
LMNB1-204ENST00000463908 SZT2Q5T011 3432 aa21.4■■□□□ 1.02
LMNB1-204ENST00000463908 A0A0U1RQG5 324 aaPredicted RBP21.4■■□□□ 1.02
LMNB1-204ENST00000463908 GAS7O60861 476 aa21.4■■□□□ 1.02
LMNB1-204ENST00000463908 LGR5O75473 907 aa21.4■■□□□ 1.02
LMNB1-204ENST00000463908 PSEN2P49810 448 aa21.4■■□□□ 1.02
LMNB1-204ENST00000463908 RESTQ13127 1097 aa21.4■■□□□ 1.02
LMNB1-204ENST00000463908 TRIM60Q495X7 471 aa21.4■■□□□ 1.02
LMNB1-204ENST00000463908 TRIM50Q86XT4 487 aa21.4■■□□□ 1.02
LMNB1-204ENST00000463908 TEKT3Q9BXF9 490 aa21.4■■□□□ 1.02
LMNB1-204ENST00000463908 UNC45AQ9H3U1 944 aa21.4■■□□□ 1.02
LMNB1-204ENST00000463908 VAV3Q9UKW4 847 aa21.4■■□□□ 1.02
LMNB1-204ENST00000463908 NOL7Q9UMY1 257 aaKnown RBP21.4■■□□□ 1.02
LMNB1-204ENST00000463908 TRIOBPQ9H2D6 2365 aa21.4■■□□□ 1.02
LMNB1-204ENST00000463908 H3BRB1 525 aa21.39■■□□□ 1.01
LMNB1-204ENST00000463908 NEMFO60524 1076 aa21.39■■□□□ 1.01
LMNB1-204ENST00000463908 RTP1P59025 263 aa21.39■■□□□ 1.01
LMNB1-204ENST00000463908 KRT76Q01546 638 aa21.39■■□□□ 1.01
LMNB1-204ENST00000463908 MFSD10Q14728 455 aa21.39■■□□□ 1.01
LMNB1-204ENST00000463908 HTATIP2Q9BUP3 242 aa21.39■■□□□ 1.01
LMNB1-204ENST00000463908 RNPEPQ9H4A4 650 aa21.39■■□□□ 1.01
LMNB1-204ENST00000463908 TUT1Q9H6E5 874 aaKnown RBP21.39■■□□□ 1.01
LMNB1-204ENST00000463908 SUPT20HL2P0C7V6 817 aa21.38■■□□□ 1.01
LMNB1-204ENST00000463908 CHMP4BP1P59074 171 aa21.38■■□□□ 1.01
LMNB1-204ENST00000463908 TLE2Q04725 743 aa21.38■■□□□ 1.01
LMNB1-204ENST00000463908 ORC2Q13416 577 aaPredicted RBP21.38■■□□□ 1.01
LMNB1-204ENST00000463908 PKP1Q13835 747 aa21.38■■□□□ 1.01
LMNB1-204ENST00000463908 CALCRLQ16602 461 aa21.38■■□□□ 1.01
LMNB1-204ENST00000463908 KIAA0753Q2KHM9 967 aa21.38■■□□□ 1.01
LMNB1-204ENST00000463908 RILPL1Q5EBL4 403 aa21.38■■□□□ 1.01
LMNB1-204ENST00000463908 ANKRD33Q7Z3H0 272 aa21.38■■□□□ 1.01
LMNB1-204ENST00000463908 BRAPQ7Z569 592 aa21.38■■□□□ 1.01
LMNB1-204ENST00000463908 SMAP1Q8IYB5 467 aaPredicted RBP21.38■■□□□ 1.01
LMNB1-204ENST00000463908 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.38■■□□□ 1.01
LMNB1-204ENST00000463908 ATP11BQ9Y2G3 1177 aa21.38■■□□□ 1.01
LMNB1-204ENST00000463908 PCDHA10Q9Y5I2 948 aa21.38■■□□□ 1.01
LMNB1-204ENST00000463908 EML1O00423 815 aa21.37■■□□□ 1.01
LMNB1-204ENST00000463908 CHMP2AO43633 222 aa21.37■■□□□ 1.01
LMNB1-204ENST00000463908 BAG4O95429 457 aaKnown RBP21.37■■□□□ 1.01
LMNB1-204ENST00000463908 TXKP42681 527 aa21.37■■□□□ 1.01
LMNB1-204ENST00000463908 SPIRE1Q08AE8 756 aa21.37■■□□□ 1.01
LMNB1-204ENST00000463908 PPP2R5CQ13362 524 aa21.37■■□□□ 1.01
LMNB1-204ENST00000463908 HIC1Q14526 733 aa21.37■■□□□ 1.01
LMNB1-204ENST00000463908 SWSAP1Q6NVH7 229 aa21.37■■□□□ 1.01
LMNB1-204ENST00000463908 MIS18BP1Q6P0N0 1132 aa21.37■■□□□ 1.01
LMNB1-204ENST00000463908 FAM173BQ6P4H8 233 aa21.37■■□□□ 1.01
LMNB1-204ENST00000463908 NFRKBQ6P4R8 1299 aa21.37■■□□□ 1.01
LMNB1-204ENST00000463908 CCDC60Q8IWA6 550 aaPredicted RBP21.37■■□□□ 1.01
LMNB1-204ENST00000463908 SLFN12Q8IYM2 578 aa21.37■■□□□ 1.01
LMNB1-204ENST00000463908 DPF3Q92784 378 aa21.37■■□□□ 1.01
LMNB1-204ENST00000463908 SMARCAD1Q9H4L7 1026 aa21.37■■□□□ 1.01
LMNB1-204ENST00000463908 DISC1Q9NRI5 854 aa21.37■■□□□ 1.01
LMNB1-204ENST00000463908 EMSYQ7Z589 1322 aa21.36■■□□□ 1.01
LMNB1-204ENST00000463908 MARCH6O60337 910 aa21.36■■□□□ 1.01
LMNB1-204ENST00000463908 ATP4AP20648 1035 aa21.36■■□□□ 1.01
LMNB1-204ENST00000463908 FXR1P51114 621 aaKnown RBP eCLIP21.36■■□□□ 1.01
LMNB1-204ENST00000463908 STAT5BP51692 787 aa21.36■■□□□ 1.01
LMNB1-204ENST00000463908 PLPPR4Q7Z2D5 763 aa21.36■■□□□ 1.01
LMNB1-204ENST00000463908 FAM126BQ8IXS8 530 aa21.36■■□□□ 1.01
LMNB1-204ENST00000463908 GLG1Q92896 1179 aa21.36■■□□□ 1.01
LMNB1-204ENST00000463908 TOX2Q96NM4 488 aa21.36■■□□□ 1.01
LMNB1-204ENST00000463908 SEZ6LQ9BYH1 1024 aa21.36■■□□□ 1.01
LMNB1-204ENST00000463908 HDAC6Q9UBN7 1215 aa21.36■■□□□ 1.01
LMNB1-204ENST00000463908 PCDHA12Q9UN75 941 aa21.36■■□□□ 1.01
LMNB1-204ENST00000463908 SCN10AQ9Y5Y9 1956 aa21.36■■□□□ 1.01
LMNB1-204ENST00000463908 WDR64B1ANS9 1081 aa21.35■■□□□ 1.01
LMNB1-204ENST00000463908 PQBP1O60828 265 aaKnown RBP21.35■■□□□ 1.01
LMNB1-204ENST00000463908 CD4P01730 458 aa21.35■■□□□ 1.01
LMNB1-204ENST00000463908 SFNP31947 248 aa21.35■■□□□ 1.01
LMNB1-204ENST00000463908 FAAP100Q0VG06 881 aa21.35■■□□□ 1.01
LMNB1-204ENST00000463908 PTGDRQ13258 359 aa21.35■■□□□ 1.01
LMNB1-204ENST00000463908 SESTD1Q86VW0 696 aa21.35■■□□□ 1.01
LMNB1-204ENST00000463908 AFAP1L1Q8TED9 768 aa21.35■■□□□ 1.01
LMNB1-204ENST00000463908 KATNAL1Q9BW62 490 aa21.35■■□□□ 1.01
LMNB1-204ENST00000463908 TRPV6Q9H1D0 765 aa21.35■■□□□ 1.01
LMNB1-204ENST00000463908 TTC12Q9H892 705 aaPredicted RBP21.35■■□□□ 1.01
LMNB1-204ENST00000463908 MAFBQ9Y5Q3 323 aaPredicted RBP21.35■■□□□ 1.01
LMNB1-204ENST00000463908 ALPK3Q96L96 1907 aa21.34■■□□□ 1.01
LMNB1-204ENST00000463908 EVI5O60447 810 aa21.34■■□□□ 1.01
LMNB1-204ENST00000463908 PSAPP07602 524 aa21.34■■□□□ 1.01
LMNB1-204ENST00000463908 OR52Z1P0C646 297 aa21.34■■□□□ 1.01
LMNB1-204ENST00000463908 PDIA4P13667 645 aaKnown RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms