RNA–Protein interactions for RNA: ENST00000463705.5

CHRNA4-202, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 5,201 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-202ENST00000463705 GPATCH11Q8N954 259 aa14.59□□□□□ -0.07
CHRNA4-202ENST00000463705 FAM20AQ96MK3 541 aa14.59□□□□□ -0.07
CHRNA4-202ENST00000463705 PCDHA6Q9UN73 950 aa14.59□□□□□ -0.07
CHRNA4-202ENST00000463705 TTLL3Q9Y4R7 772 aa14.59□□□□□ -0.07
CHRNA4-202ENST00000463705 PCDHA8Q9Y5H6 950 aa14.59□□□□□ -0.07
CHRNA4-202ENST00000463705 GH2P01242 217 aa14.59□□□□□ -0.07
CHRNA4-202ENST00000463705 OATP04181 439 aa14.59□□□□□ -0.07
CHRNA4-202ENST00000463705 EPHB4P54760 987 aa14.59□□□□□ -0.07
CHRNA4-202ENST00000463705 SP8Q8IXZ3 490 aa14.59□□□□□ -0.07
CHRNA4-202ENST00000463705 FAM167AQ96KS9 214 aa14.59□□□□□ -0.07
CHRNA4-202ENST00000463705 CFAP57Q96MR6 1250 aa14.59□□□□□ -0.07
CHRNA4-202ENST00000463705 KIF2CQ99661 725 aa14.59□□□□□ -0.07
CHRNA4-202ENST00000463705 NBPF3Q9H094 633 aa14.59□□□□□ -0.07
CHRNA4-202ENST00000463705 NHEJ1Q9H9Q4 299 aaPredicted RBP14.59□□□□□ -0.07
CHRNA4-202ENST00000463705 ATP8B3O60423 1300 aa14.59□□□□□ -0.07
CHRNA4-202ENST00000463705 USP17L5A8MUK1 530 aa14.59□□□□□ -0.07
CHRNA4-202ENST00000463705 GSG1L2A8MUP6 293 aa14.59□□□□□ -0.07
CHRNA4-202ENST00000463705 LDHAP00338 332 aaKnown RBP14.59□□□□□ -0.07
CHRNA4-202ENST00000463705 SESTD1Q86VW0 696 aa14.59□□□□□ -0.07
CHRNA4-202ENST00000463705 SGMS1Q86VZ5 419 aa14.59□□□□□ -0.07
CHRNA4-202ENST00000463705 ARHGEF1Q92888 912 aaKnown RBP14.59□□□□□ -0.07
CHRNA4-202ENST00000463705 SNX25Q9H3E2 840 aa14.59□□□□□ -0.07
CHRNA4-202ENST00000463705 RABEP2Q9H5N1 569 aa14.59□□□□□ -0.07
CHRNA4-202ENST00000463705 ZDHHC9Q9Y397 364 aa14.59□□□□□ -0.07
CHRNA4-202ENST00000463705 CLIC2O15247 247 aa14.59□□□□□ -0.07
CHRNA4-202ENST00000463705 CDKL2Q92772 493 aa14.59□□□□□ -0.07
CHRNA4-202ENST00000463705 LCMT1Q9UIC8 334 aa14.59□□□□□ -0.07
CHRNA4-202ENST00000463705 SETD1BQ9UPS6 1966 aaKnown RBP14.59□□□□□ -0.07
CHRNA4-202ENST00000463705 PVALEFA0A1B0GWK0 134 aa14.59□□□□□ -0.07
CHRNA4-202ENST00000463705 PRELPP51888 382 aa14.59□□□□□ -0.07
CHRNA4-202ENST00000463705 IPO11Q9UI26 975 aaKnown RBP14.59□□□□□ -0.07
CHRNA4-202ENST00000463705 ENC1O14682 589 aa14.58□□□□□ -0.08
CHRNA4-202ENST00000463705 CDC27P30260 824 aa14.58□□□□□ -0.08
CHRNA4-202ENST00000463705 GNGT1P63211 74 aa14.58□□□□□ -0.08
CHRNA4-202ENST00000463705 MYO1EQ12965 1108 aa14.58□□□□□ -0.08
CHRNA4-202ENST00000463705 RFX6Q8HWS3 928 aa14.58□□□□□ -0.08
CHRNA4-202ENST00000463705 ANKRD42Q8N9B4 389 aa14.58□□□□□ -0.08
CHRNA4-202ENST00000463705 GUCY2DQ02846 1103 aa14.58□□□□□ -0.08
CHRNA4-202ENST00000463705 RC3H1Q5TC82 1133 aaKnown RBP14.58□□□□□ -0.08
CHRNA4-202ENST00000463705 FAM133AQ8N9E0 248 aa14.58□□□□□ -0.08
CHRNA4-202ENST00000463705 ZNF512BQ96KM6 892 aaPredicted RBP14.58□□□□□ -0.08
CHRNA4-202ENST00000463705 PFDN4Q9NQP4 134 aa14.58□□□□□ -0.08
CHRNA4-202ENST00000463705 TBC1D22BQ9NU19 505 aa14.58□□□□□ -0.08
CHRNA4-202ENST00000463705 KLHL14Q9P2G3 628 aa14.58□□□□□ -0.08
CHRNA4-202ENST00000463705 SOWAHDA6NJG2 315 aa14.58□□□□□ -0.08
CHRNA4-202ENST00000463705 GOLGA8CPA6NN73 597 aa14.58□□□□□ -0.08
CHRNA4-202ENST00000463705 SCARF1Q14162 830 aa14.58□□□□□ -0.08
CHRNA4-202ENST00000463705 MTERF2Q49AM1 385 aa14.58□□□□□ -0.08
CHRNA4-202ENST00000463705 LMNTD2Q8IXW0 634 aa14.58□□□□□ -0.08
CHRNA4-202ENST00000463705 FMR1NBQ8N0W7 255 aaPredicted RBP14.58□□□□□ -0.08
CHRNA4-202ENST00000463705 CCDC160A6NGH7 325 aa14.58□□□□□ -0.08
CHRNA4-202ENST00000463705 FDX1P10109 184 aa14.58□□□□□ -0.08
CHRNA4-202ENST00000463705 BSPRYQ5W0U4 402 aa14.58□□□□□ -0.08
CHRNA4-202ENST00000463705 MIGA2Q7L4E1 593 aa14.58□□□□□ -0.08
CHRNA4-202ENST00000463705 RAD54LQ92698 747 aa14.58□□□□□ -0.08
CHRNA4-202ENST00000463705 VCXQ9H320 206 aa14.58□□□□□ -0.08
CHRNA4-202ENST00000463705 GOLPH3LQ9H4A5 285 aa14.58□□□□□ -0.08
CHRNA4-202ENST00000463705 NUB1Q9Y5A7 615 aa14.58□□□□□ -0.08
CHRNA4-202ENST00000463705 H7C0C1 242 aa14.57□□□□□ -0.08
CHRNA4-202ENST00000463705 NDUFA10O95299 355 aa14.57□□□□□ -0.08
CHRNA4-202ENST00000463705 DDIT3P35638 169 aa14.57□□□□□ -0.08
CHRNA4-202ENST00000463705 ATP5OP48047 213 aa14.57□□□□□ -0.08
CHRNA4-202ENST00000463705 KRT31Q15323 416 aa14.57□□□□□ -0.08
CHRNA4-202ENST00000463705 PDXDC2PQ6P474 469 aa14.57□□□□□ -0.08
CHRNA4-202ENST00000463705 KIAA1586Q9HCI6 787 aa14.57□□□□□ -0.08
CHRNA4-202ENST00000463705 UBE2TQ9NPD8 197 aaPredicted RBP14.57□□□□□ -0.08
CHRNA4-202ENST00000463705 SRGAP2BP0DMP2 458 aa14.57□□□□□ -0.08
CHRNA4-202ENST00000463705 EIF4A3P38919 411 aaKnown RBP14.57□□□□□ -0.08
CHRNA4-202ENST00000463705 TSNAXIP1Q2TAA8 658 aa14.57□□□□□ -0.08
CHRNA4-202ENST00000463705 PLCD3Q8N3E9 789 aa14.57□□□□□ -0.08
CHRNA4-202ENST00000463705 ACRBPQ8NEB7 543 aa14.57□□□□□ -0.08
CHRNA4-202ENST00000463705 ARHGEF2Q92974 986 aaKnown RBP14.57□□□□□ -0.08
CHRNA4-202ENST00000463705 MAGOHBQ96A72 148 aaKnown RBP14.57□□□□□ -0.08
CHRNA4-202ENST00000463705 CAPS2Q9BXY5 557 aa14.57□□□□□ -0.08
CHRNA4-202ENST00000463705 PCIF1Q9H4Z3 704 aa14.57□□□□□ -0.08
CHRNA4-202ENST00000463705 HOXC10Q9NYD6 342 aa14.57□□□□□ -0.08
CHRNA4-202ENST00000463705 DIS3Q9Y2L1 958 aaKnown RBP14.57□□□□□ -0.08
CHRNA4-202ENST00000463705 PCDHA13Q9Y5I0 950 aa14.57□□□□□ -0.08
CHRNA4-202ENST00000463705 DIP2AQ14689 1571 aa14.57□□□□□ -0.08
CHRNA4-202ENST00000463705 MFAP3LO75121 409 aa14.57□□□□□ -0.08
CHRNA4-202ENST00000463705 VCX3BQ9H321 246 aa14.57□□□□□ -0.08
CHRNA4-202ENST00000463705 BARHL2Q9NY43 387 aa14.57□□□□□ -0.08
CHRNA4-202ENST00000463705 JCADQ9P266 1359 aa14.57□□□□□ -0.08
CHRNA4-202ENST00000463705 C21orf2O43822 256 aa14.57□□□□□ -0.08
CHRNA4-202ENST00000463705 GFPT2O94808 682 aa14.57□□□□□ -0.08
CHRNA4-202ENST00000463705 HOXA13P31271 388 aaPredicted RBP14.57□□□□□ -0.08
CHRNA4-202ENST00000463705 DNAJC24Q6P3W2 148 aa14.57□□□□□ -0.08
CHRNA4-202ENST00000463705 NME8Q8N427 588 aa14.57□□□□□ -0.08
CHRNA4-202ENST00000463705 MCPH1Q8NEM0 835 aa14.57□□□□□ -0.08
CHRNA4-202ENST00000463705 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.57□□□□□ -0.08
CHRNA4-202ENST00000463705 RAB3IPQ96QF0 476 aaPredicted RBP14.57□□□□□ -0.08
CHRNA4-202ENST00000463705 GPSM2P81274 684 aa14.56□□□□□ -0.08
CHRNA4-202ENST00000463705 CTTNQ14247 550 aaKnown RBP14.56□□□□□ -0.08
CHRNA4-202ENST00000463705 APOBEC3FQ8IUX4 373 aaKnown RBP14.56□□□□□ -0.08
CHRNA4-202ENST00000463705 OXER1Q8TDS5 423 aa14.56□□□□□ -0.08
CHRNA4-202ENST00000463705 DAAM1Q9Y4D1 1078 aa14.56□□□□□ -0.08
CHRNA4-202ENST00000463705 ECEL1O95672 775 aa14.56□□□□□ -0.08
CHRNA4-202ENST00000463705 EIF2AK2P19525 551 aaKnown RBP14.56□□□□□ -0.08
CHRNA4-202ENST00000463705 CPS1P31327 1500 aa14.56□□□□□ -0.08
CHRNA4-202ENST00000463705 ADAT2Q7Z6V5 191 aaKnown RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms