RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 ADAMTS3O15072 1205 aa18.48■□□□□ 0.55
COL1A1-202ENST00000463440 ACTN1P12814 892 aa18.48■□□□□ 0.55
COL1A1-202ENST00000463440 LRRC8DQ7L1W4 858 aa18.48■□□□□ 0.55
COL1A1-202ENST00000463440 SERINC5Q86VE9 423 aa18.48■□□□□ 0.55
COL1A1-202ENST00000463440 PLA2G4DQ86XP0 818 aa18.48■□□□□ 0.55
COL1A1-202ENST00000463440 RASGRP4Q8TDF6 673 aa18.48■□□□□ 0.55
COL1A1-202ENST00000463440 CRYGNQ8WXF5 182 aa18.48■□□□□ 0.55
COL1A1-202ENST00000463440 GLG1Q92896 1179 aa18.48■□□□□ 0.55
COL1A1-202ENST00000463440 FTOQ9C0B1 505 aaKnown RBP eCLIP18.48■□□□□ 0.55
COL1A1-202ENST00000463440 RNPEPQ9H4A4 650 aa18.48■□□□□ 0.55
COL1A1-202ENST00000463440 SMARCAD1Q9H4L7 1026 aa18.48■□□□□ 0.55
COL1A1-202ENST00000463440 SZT2Q5T011 3432 aa18.48■□□□□ 0.55
COL1A1-202ENST00000463440 TRIP12Q14669 1992 aaPredicted RBP18.48■□□□□ 0.55
COL1A1-202ENST00000463440 TANC1Q9C0D5 1861 aa18.48■□□□□ 0.55
COL1A1-202ENST00000463440 FAM86B1E9PN63 330 aa18.47■□□□□ 0.55
COL1A1-202ENST00000463440 FAM86B2P0C5J1 330 aa18.47■□□□□ 0.55
COL1A1-202ENST00000463440 CKBP12277 381 aa18.47■□□□□ 0.55
COL1A1-202ENST00000463440 HOXC8P31273 242 aa18.47■□□□□ 0.55
COL1A1-202ENST00000463440 NEK4P51957 841 aa18.47■□□□□ 0.55
COL1A1-202ENST00000463440 SETQ01105 290 aaPredicted RBP18.47■□□□□ 0.55
COL1A1-202ENST00000463440 HIC1Q14526 733 aa18.47■□□□□ 0.55
COL1A1-202ENST00000463440 VWCEQ96DN2 955 aa18.47■□□□□ 0.55
COL1A1-202ENST00000463440 C22orf23Q9BZE7 217 aa18.47■□□□□ 0.55
COL1A1-202ENST00000463440 AZI2Q9H6S1 392 aa18.47■□□□□ 0.55
COL1A1-202ENST00000463440 MTMR10Q9NXD2 777 aa18.47■□□□□ 0.55
COL1A1-202ENST00000463440 ERAP1Q9NZ08 941 aa18.47■□□□□ 0.55
COL1A1-202ENST00000463440 CXXC1Q9P0U4 656 aaPredicted RBP18.47■□□□□ 0.55
COL1A1-202ENST00000463440 PCDHA4Q9UN74 947 aa18.47■□□□□ 0.55
COL1A1-202ENST00000463440 SCN5AQ14524 2016 aa18.46■□□□□ 0.55
COL1A1-202ENST00000463440 ZBBXA8MT70 800 aa18.46■□□□□ 0.55
COL1A1-202ENST00000463440 XBP1P17861 261 aa18.46■□□□□ 0.55
COL1A1-202ENST00000463440 ITGB3BPQ13352 177 aaPredicted RBP18.46■□□□□ 0.55
COL1A1-202ENST00000463440 TRIM71Q2Q1W2 868 aaKnown RBP18.46■□□□□ 0.55
COL1A1-202ENST00000463440 GALNT17Q6IS24 598 aa18.46■□□□□ 0.55
COL1A1-202ENST00000463440 SETD4Q9NVD3 440 aa18.46■□□□□ 0.55
COL1A1-202ENST00000463440 SLC4A7Q9Y6M7 1214 aa18.46■□□□□ 0.55
COL1A1-202ENST00000463440 EMSYQ7Z589 1322 aa18.46■□□□□ 0.55
COL1A1-202ENST00000463440 NRCAMQ92823 1304 aa18.46■□□□□ 0.55
COL1A1-202ENST00000463440 STK36Q9NRP7 1315 aa18.46■□□□□ 0.55
COL1A1-202ENST00000463440 IGLV3-22A0A075B6J6 115 aa18.45■□□□□ 0.54
COL1A1-202ENST00000463440 TMEM265A0A087WTH1 108 aa18.45■□□□□ 0.54
COL1A1-202ENST00000463440 TREHO43280 583 aa18.45■□□□□ 0.54
COL1A1-202ENST00000463440 LGR5O75473 907 aa18.45■□□□□ 0.54
COL1A1-202ENST00000463440 CIITAP33076 1130 aa18.45■□□□□ 0.54
COL1A1-202ENST00000463440 THPOP40225 353 aa18.45■□□□□ 0.54
COL1A1-202ENST00000463440 ACTR2P61160 394 aa18.45■□□□□ 0.54
COL1A1-202ENST00000463440 BLIDQ8IZY5 108 aa18.45■□□□□ 0.54
COL1A1-202ENST00000463440 DAGLBQ8NCG7 672 aa18.45■□□□□ 0.54
COL1A1-202ENST00000463440 ZNF577Q9BSK1 485 aa18.45■□□□□ 0.54
COL1A1-202ENST00000463440 IPO5O00410 1097 aaKnown RBP18.44■□□□□ 0.54
COL1A1-202ENST00000463440 DNAJB2P25686 324 aa18.44■□□□□ 0.54
COL1A1-202ENST00000463440 MARK3P27448 753 aa18.44■□□□□ 0.54
COL1A1-202ENST00000463440 USP11P51784 963 aa18.44■□□□□ 0.54
COL1A1-202ENST00000463440 PPFIA1Q13136 1202 aa18.44■□□□□ 0.54
COL1A1-202ENST00000463440 C8orf34Q49A92 452 aa18.44■□□□□ 0.54
COL1A1-202ENST00000463440 PRR16Q569H4 304 aa18.44■□□□□ 0.54
COL1A1-202ENST00000463440 ZNF618Q5T7W0 954 aa18.44■□□□□ 0.54
COL1A1-202ENST00000463440 LMBR1Q8WVP7 490 aa18.44■□□□□ 0.54
COL1A1-202ENST00000463440 WASF1Q92558 559 aa18.44■□□□□ 0.54
COL1A1-202ENST00000463440 TNPO1Q92973 898 aaKnown RBP18.44■□□□□ 0.54
COL1A1-202ENST00000463440 WNT8BQ93098 351 aa18.44■□□□□ 0.54
COL1A1-202ENST00000463440 FAM161BQ96MY7 647 aa18.44■□□□□ 0.54
COL1A1-202ENST00000463440 AIFM3Q96NN9 605 aa18.44■□□□□ 0.54
COL1A1-202ENST00000463440 TBC1D22BQ9NU19 505 aa18.44■□□□□ 0.54
COL1A1-202ENST00000463440 TCEAL9Q9UHQ7 104 aa18.44■□□□□ 0.54
COL1A1-202ENST00000463440 LAMA2P24043 3122 aaKnown RBP18.44■□□□□ 0.54
COL1A1-202ENST00000463440 KAT6AQ92794 2004 aa18.44■□□□□ 0.54
COL1A1-202ENST00000463440 GRXCR1A8MXD5 290 aa18.43■□□□□ 0.54
COL1A1-202ENST00000463440 DDX39AO00148 427 aaKnown RBP18.43■□□□□ 0.54
COL1A1-202ENST00000463440 CAND2O75155 1236 aa18.43■□□□□ 0.54
COL1A1-202ENST00000463440 ADAM17P78536 824 aa18.43■□□□□ 0.54
COL1A1-202ENST00000463440 RAB30Q15771 203 aa18.43■□□□□ 0.54
COL1A1-202ENST00000463440 ME3Q16798 604 aa18.43■□□□□ 0.54
COL1A1-202ENST00000463440 PLPPR4Q7Z2D5 763 aa18.43■□□□□ 0.54
COL1A1-202ENST00000463440 GTF3C6Q969F1 213 aa18.43■□□□□ 0.54
COL1A1-202ENST00000463440 TIFAQ96CG3 184 aa18.43■□□□□ 0.54
COL1A1-202ENST00000463440 PCYT2Q99447 389 aa18.43■□□□□ 0.54
COL1A1-202ENST00000463440 SEMA6BQ9H3T3 888 aa18.43■□□□□ 0.54
COL1A1-202ENST00000463440 ORC3Q9UBD5 711 aaPredicted RBP18.43■□□□□ 0.54
COL1A1-202ENST00000463440 MSRAQ9UJ68 235 aa18.43■□□□□ 0.54
COL1A1-202ENST00000463440 RSPH10B2B2RC85 870 aa18.42■□□□□ 0.54
COL1A1-202ENST00000463440 DHX15O43143 795 aaKnown RBP18.42■□□□□ 0.54
COL1A1-202ENST00000463440 BAIAP3O94812 1187 aa18.42■□□□□ 0.54
COL1A1-202ENST00000463440 ATG7O95352 703 aa18.42■□□□□ 0.54
COL1A1-202ENST00000463440 CTDNEP1O95476 244 aa18.42■□□□□ 0.54
COL1A1-202ENST00000463440 CXCL10P02778 98 aa18.42■□□□□ 0.54
COL1A1-202ENST00000463440 RSPH10BP0C881 870 aa18.42■□□□□ 0.54
COL1A1-202ENST00000463440 ATP2A2P16615 1042 aaKnown RBP18.42■□□□□ 0.54
COL1A1-202ENST00000463440 STAT5BP51692 787 aa18.42■□□□□ 0.54
COL1A1-202ENST00000463440 GRIK4Q16099 956 aa18.42■□□□□ 0.54
COL1A1-202ENST00000463440 FAM160B1Q5W0V3 765 aa18.42■□□□□ 0.54
COL1A1-202ENST00000463440 TRAF7Q6Q0C0 670 aa18.42■□□□□ 0.54
COL1A1-202ENST00000463440 NECAB1Q8N987 351 aa18.42■□□□□ 0.54
COL1A1-202ENST00000463440 TBCKQ8TEA7 893 aa18.42■□□□□ 0.54
COL1A1-202ENST00000463440 PBX4Q9BYU1 374 aa18.42■□□□□ 0.54
COL1A1-202ENST00000463440 RRN3P2A6NIE6 340 aa18.41■□□□□ 0.54
COL1A1-202ENST00000463440 M0R2N6 131 aa18.41■□□□□ 0.54
COL1A1-202ENST00000463440 BACH1O14867 736 aa18.41■□□□□ 0.54
COL1A1-202ENST00000463440 NBNO60934 754 aa18.41■□□□□ 0.54
COL1A1-202ENST00000463440 LARGE1O95461 756 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms