RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 NELFCDQ8IXH7 590 aa11.28□□□□□ -0.6
MSH5-211ENST00000463144 ACRBPQ8NEB7 543 aa11.28□□□□□ -0.6
MSH5-211ENST00000463144 PIGOQ8TEQ8 1089 aa11.28□□□□□ -0.6
MSH5-211ENST00000463144 WNK4Q96J92 1243 aa11.28□□□□□ -0.6
MSH5-211ENST00000463144 WDR24Q96S15 920 aa11.28□□□□□ -0.6
MSH5-211ENST00000463144 MXRA8Q9BRK3 442 aa11.28□□□□□ -0.6
MSH5-211ENST00000463144 TANGO6Q9C0B7 1094 aa11.28□□□□□ -0.6
MSH5-211ENST00000463144 UNC45AQ9H3U1 944 aa11.28□□□□□ -0.6
MSH5-211ENST00000463144 RPAP3Q9H6T3 665 aaPredicted RBP11.28□□□□□ -0.6
MSH5-211ENST00000463144 EHMT1Q9H9B1 1298 aa11.28□□□□□ -0.6
MSH5-211ENST00000463144 SPON1Q9HCB6 807 aa11.28□□□□□ -0.6
MSH5-211ENST00000463144 WRAP73Q9P2S5 460 aaPredicted RBP11.28□□□□□ -0.6
MSH5-211ENST00000463144 ZNF215Q9UL58 517 aaPredicted RBP11.28□□□□□ -0.6
MSH5-211ENST00000463144 PPP1R9AQ9ULJ8 1098 aa11.28□□□□□ -0.6
MSH5-211ENST00000463144 RLFQ13129 1914 aa11.28□□□□□ -0.6
MSH5-211ENST00000463144 PHIPQ8WWQ0 1821 aa11.28□□□□□ -0.6
MSH5-211ENST00000463144 GOLGA6L9A6NEM1 432 aa11.28□□□□□ -0.6
MSH5-211ENST00000463144 FLOT1O75955 427 aa11.28□□□□□ -0.6
MSH5-211ENST00000463144 EYA4O95677 639 aa11.28□□□□□ -0.6
MSH5-211ENST00000463144 ERCC3P19447 782 aa11.28□□□□□ -0.6
MSH5-211ENST00000463144 HOXD13P35453 343 aa11.28□□□□□ -0.6
MSH5-211ENST00000463144 HIRAP54198 1017 aaPredicted RBP11.28□□□□□ -0.6
MSH5-211ENST00000463144 CYP26C1Q6V0L0 522 aa11.28□□□□□ -0.6
MSH5-211ENST00000463144 SCYL3Q8IZE3 742 aa11.28□□□□□ -0.6
MSH5-211ENST00000463144 OR8K1Q8NGG5 319 aa11.28□□□□□ -0.6
MSH5-211ENST00000463144 TSG101Q99816 390 aa11.28□□□□□ -0.6
MSH5-211ENST00000463144 ZNF577Q9BSK1 485 aa11.28□□□□□ -0.6
MSH5-211ENST00000463144 IRX2Q9BZI1 471 aaPredicted RBP11.28□□□□□ -0.6
MSH5-211ENST00000463144 NDST4Q9H3R1 872 aa11.28□□□□□ -0.6
MSH5-211ENST00000463144 ZHX3Q9H4I2 956 aa11.28□□□□□ -0.6
MSH5-211ENST00000463144 TUFT1Q9NNX1 390 aa11.28□□□□□ -0.6
MSH5-211ENST00000463144 LUC7L2Q9Y383 392 aaKnown RBP11.28□□□□□ -0.6
MSH5-211ENST00000463144 GAS7O60861 476 aa11.27□□□□□ -0.61
MSH5-211ENST00000463144 FGFR1OPO95684 399 aaKnown RBP11.27□□□□□ -0.61
MSH5-211ENST00000463144 ABL1P00519 1130 aa11.27□□□□□ -0.61
MSH5-211ENST00000463144 PTPRAP18433 802 aa11.27□□□□□ -0.61
MSH5-211ENST00000463144 BACE1P56817 501 aa11.27□□□□□ -0.61
MSH5-211ENST00000463144 FKBP3Q00688 224 aaKnown RBP11.27□□□□□ -0.61
MSH5-211ENST00000463144 NCBP1Q09161 790 aaKnown RBP11.27□□□□□ -0.61
MSH5-211ENST00000463144 MAN2A1Q16706 1144 aa11.27□□□□□ -0.61
MSH5-211ENST00000463144 DCAF15Q66K64 600 aa11.27□□□□□ -0.61
MSH5-211ENST00000463144 RINT1Q6NUQ1 792 aa11.27□□□□□ -0.61
MSH5-211ENST00000463144 EPM2AIP1Q7L775 607 aaPredicted RBP11.27□□□□□ -0.61
MSH5-211ENST00000463144 SFR1Q86XK3 245 aa11.27□□□□□ -0.61
MSH5-211ENST00000463144 TPH2Q8IWU9 490 aa11.27□□□□□ -0.61
MSH5-211ENST00000463144 SYTL5Q8TDW5 730 aaPredicted RBP11.27□□□□□ -0.61
MSH5-211ENST00000463144 HOMER2Q9NSB8 354 aa11.27□□□□□ -0.61
MSH5-211ENST00000463144 GPRC5DQ9NZD1 345 aa11.27□□□□□ -0.61
MSH5-211ENST00000463144 SIK3Q9Y2K2 1263 aa11.27□□□□□ -0.61
MSH5-211ENST00000463144 RABGAP1Q9Y3P9 1069 aa11.27□□□□□ -0.61
MSH5-211ENST00000463144 DICER1Q9UPY3 1922 aaKnown RBP11.27□□□□□ -0.61
MSH5-211ENST00000463144 IPO5O00410 1097 aaKnown RBP11.26□□□□□ -0.61
MSH5-211ENST00000463144 TRAF5O00463 557 aa11.26□□□□□ -0.61
MSH5-211ENST00000463144 GNG11P61952 73 aa11.26□□□□□ -0.61
MSH5-211ENST00000463144 MRPS9P82933 396 aaKnown RBP11.26□□□□□ -0.61
MSH5-211ENST00000463144 LRRN4CLQ8ND94 238 aa11.26□□□□□ -0.61
MSH5-211ENST00000463144 ANKRD7Q92527 254 aa11.26□□□□□ -0.61
MSH5-211ENST00000463144 WRNIP1Q96S55 665 aa11.26□□□□□ -0.61
MSH5-211ENST00000463144 NUP58Q9BVL2 599 aa11.26□□□□□ -0.61
MSH5-211ENST00000463144 WDR11Q9BZH6 1224 aa11.26□□□□□ -0.61
MSH5-211ENST00000463144 POLR2AP24928 1970 aaKnown RBP11.26□□□□□ -0.61
MSH5-211ENST00000463144 COL11A1P12107 1806 aaPredicted RBP11.26□□□□□ -0.61
MSH5-211ENST00000463144 SSC5DA1L4H1 1573 aa11.26□□□□□ -0.61
MSH5-211ENST00000463144 EPHB6O15197 1021 aa11.26□□□□□ -0.61
MSH5-211ENST00000463144 EPS15P42566 896 aa11.26□□□□□ -0.61
MSH5-211ENST00000463144 USP14P54578 494 aa11.26□□□□□ -0.61
MSH5-211ENST00000463144 SETQ01105 290 aaPredicted RBP11.26□□□□□ -0.61
MSH5-211ENST00000463144 MEA1Q16626 185 aa11.26□□□□□ -0.61
MSH5-211ENST00000463144 FIGNQ5HY92 759 aa11.26□□□□□ -0.61
MSH5-211ENST00000463144 FKBP15Q5T1M5 1219 aa11.26□□□□□ -0.61
MSH5-211ENST00000463144 C1orf186Q6ZWK4 172 aa11.26□□□□□ -0.61
MSH5-211ENST00000463144 MCF2L2Q86YR7 1114 aa11.26□□□□□ -0.61
MSH5-211ENST00000463144 APOBEC3FQ8IUX4 373 aaKnown RBP11.26□□□□□ -0.61
MSH5-211ENST00000463144 ZC3H3Q8IXZ2 948 aaKnown RBP11.26□□□□□ -0.61
MSH5-211ENST00000463144 KCTD17Q8N5Z5 321 aa11.26□□□□□ -0.61
MSH5-211ENST00000463144 CCDC155Q8N6L0 562 aa11.26□□□□□ -0.61
MSH5-211ENST00000463144 RETREG2Q8NC44 543 aa11.26□□□□□ -0.61
MSH5-211ENST00000463144 ATG4CQ96DT6 458 aa11.26□□□□□ -0.61
MSH5-211ENST00000463144 PURBQ96QR8 312 aaKnown RBP11.26□□□□□ -0.61
MSH5-211ENST00000463144 TAAR1Q96RJ0 339 aa11.26□□□□□ -0.61
MSH5-211ENST00000463144 LZTFL1Q9NQ48 299 aa11.26□□□□□ -0.61
MSH5-211ENST00000463144 REXO2Q9Y3B8 237 aaKnown RBP11.26□□□□□ -0.61
MSH5-211ENST00000463144 RIPK3Q9Y572 518 aa11.26□□□□□ -0.61
MSH5-211ENST00000463144 COL4A3BPQ9Y5P4 624 aa11.26□□□□□ -0.61
MSH5-211ENST00000463144 EPN1Q9Y6I3 576 aaPredicted RBP11.26□□□□□ -0.61
MSH5-211ENST00000463144 SFI1A8K8P3 1242 aa11.25□□□□□ -0.61
MSH5-211ENST00000463144 VWA5AO00534 786 aa11.25□□□□□ -0.61
MSH5-211ENST00000463144 DHX15O43143 795 aaKnown RBP11.25□□□□□ -0.61
MSH5-211ENST00000463144 SLU7O95391 586 aaKnown RBP11.25□□□□□ -0.61
MSH5-211ENST00000463144 MYBP10242 640 aa11.25□□□□□ -0.61
MSH5-211ENST00000463144 BCRP11274 1271 aa11.25□□□□□ -0.61
MSH5-211ENST00000463144 TRIM21P19474 475 aaKnown RBP11.25□□□□□ -0.61
MSH5-211ENST00000463144 RPS6P62753 249 aaKnown RBP11.25□□□□□ -0.61
MSH5-211ENST00000463144 KCNMA1Q12791 1236 aa11.25□□□□□ -0.61
MSH5-211ENST00000463144 EPHA7Q15375 998 aa11.25□□□□□ -0.61
MSH5-211ENST00000463144 ZNF280CQ8ND82 737 aa11.25□□□□□ -0.61
MSH5-211ENST00000463144 CEP63Q96MT8 703 aa11.25□□□□□ -0.61
MSH5-211ENST00000463144 TEKT3Q9BXF9 490 aa11.25□□□□□ -0.61
MSH5-211ENST00000463144 KCNH7Q9NS40 1196 aa11.25□□□□□ -0.61
MSH5-211ENST00000463144 GGA3Q9NZ52 723 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms