RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 SAMM50Q9Y512 469 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 PCDHGC5Q9Y5F6 944 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 STK24Q9Y6E0 443 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 BZW2Q9Y6E2 419 aaKnown RBP3.86□□□□□ -1.79
COL8A1-204ENST00000462604 CAPN7Q9Y6W3 813 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 ATP8B3O60423 1300 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 ECM29Q5VYK3 1845 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 SHANK3Q9BYB0 1731 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 A0A0A6YYK5 440 aaPredicted RBP3.85□□□□□ -1.79
COL8A1-204ENST00000462604 PNMA6FA0A0J9YX94 578 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 GOLGA6L10A0A0M3HER8 536 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 ESYT3A0FGR9 886 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 POTEMA6NI47 508 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 WTIPA6NIX2 430 aaPredicted RBP3.85□□□□□ -1.79
COL8A1-204ENST00000462604 USP17L5A8MUK1 530 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 E7EVH7 732 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 CCDC188H7C350 402 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 KRIT1O00522 736 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 SLC16A3O15427 465 aaKnown RBP3.85□□□□□ -1.79
COL8A1-204ENST00000462604 RAD51CO43502 376 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 CALUO43852 315 aaPredicted RBP3.85□□□□□ -1.79
COL8A1-204ENST00000462604 CEP104O60308 925 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 NOL4O94818 638 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 KIF4AO95239 1232 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 TDP2O95551 362 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 KRT14P02533 472 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 AFPP02771 609 aaKnown RBP3.85□□□□□ -1.79
COL8A1-204ENST00000462604 FAM153BP0C7A2 387 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 PLA2G4BP0C869 781 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 MYBP10242 640 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 HNRNPH1P31943 449 aaKnown RBP3.85□□□□□ -1.79
COL8A1-204ENST00000462604 HPDP32754 393 aaPredicted RBP3.85□□□□□ -1.79
COL8A1-204ENST00000462604 CTNNA1P35221 906 aaKnown RBP3.85□□□□□ -1.79
COL8A1-204ENST00000462604 MDH1P40925 334 aaKnown RBP3.85□□□□□ -1.79
COL8A1-204ENST00000462604 CDK8P49336 464 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 USP11P51784 963 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 MRPL12P52815 198 aaKnown RBP3.85□□□□□ -1.79
COL8A1-204ENST00000462604 EIF3BP55884 814 aaKnown RBP3.85□□□□□ -1.79
COL8A1-204ENST00000462604 MARSP56192 900 aaKnown RBP3.85□□□□□ -1.79
COL8A1-204ENST00000462604 GUCY1A3Q02108 690 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 ARID5AQ03989 594 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 ACTN3Q08043 901 aaPredicted RBP3.85□□□□□ -1.79
COL8A1-204ENST00000462604 IFFO1Q0D2I5 559 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 PPP2R5EQ16537 467 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 EDRF1Q3B7T1 1238 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 FAM153CQ494X1 144 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 ODF2Q5BJF6 829 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 HERC4Q5GLZ8 1057 aaPredicted RBP3.85□□□□□ -1.79
COL8A1-204ENST00000462604 HYIQ5T013 277 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 RBM26Q5T8P6 1007 aaKnown RBP3.85□□□□□ -1.79
COL8A1-204ENST00000462604 AGBL2Q5U5Z8 902 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 FBXW10Q5XX13 1052 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 SMYD5Q6GMV2 418 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 USP17L2Q6R6M4 530 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 TPTE2Q6XPS3 522 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 FRMD5Q7Z6J6 570 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 RPAINQ86UA6 219 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 TAX1BP1Q86VP1 789 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 HOOK3Q86VS8 718 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 GPBP1Q86WP2 473 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 CCDC50Q8IVM0 306 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 TRIM59Q8IWR1 403 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 NELFCDQ8IXH7 590 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 ZC3H3Q8IXZ2 948 aaKnown RBP3.85□□□□□ -1.79
COL8A1-204ENST00000462604 SYCE1Q8N0S2 351 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 FAM133AQ8N9E0 248 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 CCDC26Q8TAB7 109 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 ERMNQ8TAM6 284 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 MYCBPAPQ8TBZ2 947 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 ACTRT1Q8TDG2 376 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 PIK3R5Q8WYR1 880 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 P3H4Q92791 437 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 KAT2BQ92831 832 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 CUL5Q93034 780 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 CYFIP2Q96F07 1278 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 CCT8L2Q96SF2 557 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 NAP1L3Q99457 506 aaPredicted RBP3.85□□□□□ -1.79
COL8A1-204ENST00000462604 HINFPQ9BQA5 517 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.85□□□□□ -1.79
COL8A1-204ENST00000462604 TACO1Q9BSH4 297 aaKnown RBP3.85□□□□□ -1.79
COL8A1-204ENST00000462604 MXD3Q9BW11 206 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 RTFDC1Q9BY42 306 aaPredicted RBP3.85□□□□□ -1.79
COL8A1-204ENST00000462604 EHD4Q9H223 541 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 GANQ9H2C0 597 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 CENPHQ9H3R5 247 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 ZHX3Q9H4I2 956 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 RIOX1Q9H6W3 641 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 VCPKMTQ9H867 229 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 CNOT10Q9H9A5 744 aaKnown RBP3.85□□□□□ -1.79
COL8A1-204ENST00000462604 VAT1LQ9HCJ6 419 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 A1CFQ9NQ94 594 aaKnown RBP3.85□□□□□ -1.79
COL8A1-204ENST00000462604 FAM114A2Q9NRY5 505 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 TMEM260Q9NX78 707 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 AIPL1Q9NZN9 384 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 ANKIB1Q9P2G1 1089 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 SWAP70Q9UH65 585 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 FAM153AQ9UHL3 310 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 SALL4Q9UJQ4 1053 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 INTUQ9ULD6 942 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 JAG2Q9Y219 1238 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms