RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 PJA2O43164 708 aa18.68■□□□□ 0.58
ACTB-207ENST00000462494 TLR2O60603 784 aa18.68■□□□□ 0.58
ACTB-207ENST00000462494 SERPING1P05155 500 aa18.68■□□□□ 0.58
ACTB-207ENST00000462494 TAL1P17542 331 aaPredicted RBP18.68■□□□□ 0.58
ACTB-207ENST00000462494 CAPN2P17655 700 aa18.68■□□□□ 0.58
ACTB-207ENST00000462494 SLC12A3P55017 1021 aa18.68■□□□□ 0.58
ACTB-207ENST00000462494 PSMC6P62333 389 aa18.68■□□□□ 0.58
ACTB-207ENST00000462494 ICA1Q05084 483 aa18.68■□□□□ 0.58
ACTB-207ENST00000462494 RAPGEF1Q13905 1077 aa18.68■□□□□ 0.58
ACTB-207ENST00000462494 HAUS3Q68CZ6 603 aa18.68■□□□□ 0.58
ACTB-207ENST00000462494 CATSPER3Q86XQ3 398 aa18.68■□□□□ 0.58
ACTB-207ENST00000462494 TRIM59Q8IWR1 403 aa18.68■□□□□ 0.58
ACTB-207ENST00000462494 SPATA4Q8NEY3 305 aa18.68■□□□□ 0.58
ACTB-207ENST00000462494 HDAC7Q8WUI4 952 aa18.68■□□□□ 0.58
ACTB-207ENST00000462494 ZDHHC15Q96MV8 337 aa18.68■□□□□ 0.58
ACTB-207ENST00000462494 P2RX7Q99572 595 aaKnown RBP18.68■□□□□ 0.58
ACTB-207ENST00000462494 LRRC1Q9BTT6 524 aa18.68■□□□□ 0.58
ACTB-207ENST00000462494 SELENOOQ9BVL4 669 aa18.68■□□□□ 0.58
ACTB-207ENST00000462494 PI4KBQ9UBF8 816 aa18.68■□□□□ 0.58
ACTB-207ENST00000462494 CYP3A7-CYP3A51PA0A087WV96 503 aa18.67■□□□□ 0.58
ACTB-207ENST00000462494 RNF40O75150 1001 aa18.67■□□□□ 0.58
ACTB-207ENST00000462494 PRLRP16471 622 aa18.67■□□□□ 0.58
ACTB-207ENST00000462494 TCP1P17987 556 aaKnown RBP18.67■□□□□ 0.58
ACTB-207ENST00000462494 CYP3A7P24462 503 aa18.67■□□□□ 0.58
ACTB-207ENST00000462494 PABPC4Q13310 644 aaKnown RBP eCLIP18.67■□□□□ 0.581e-323■■□□□ 13.6
ACTB-207ENST00000462494 ZNF622Q969S3 477 aaKnown RBP eCLIP18.67■□□□□ 0.58
ACTB-207ENST00000462494 MKL1Q969V6 931 aa18.67■□□□□ 0.58
ACTB-207ENST00000462494 NUCKS1Q9H1E3 243 aaKnown RBP18.67■□□□□ 0.58
ACTB-207ENST00000462494 DHX36Q9H2U1 1008 aaKnown RBP18.67■□□□□ 0.58
ACTB-207ENST00000462494 NYAP2Q9P242 653 aa18.67■□□□□ 0.58
ACTB-207ENST00000462494 DNA2P51530 1060 aa18.66■□□□□ 0.58
ACTB-207ENST00000462494 CASP5P51878 434 aa18.66■□□□□ 0.58
ACTB-207ENST00000462494 SLC7A5Q01650 507 aa18.66■□□□□ 0.58
ACTB-207ENST00000462494 MMGT1Q8N4V1 131 aa18.66■□□□□ 0.58
ACTB-207ENST00000462494 TBC1D5Q92609 795 aa18.66■□□□□ 0.58
ACTB-207ENST00000462494 FAM204AQ9H8W3 233 aa18.66■□□□□ 0.58
ACTB-207ENST00000462494 FAM198AQ9UFP1 575 aa18.66■□□□□ 0.58
ACTB-207ENST00000462494 ANKRD31Q8N7Z5 1873 aa18.66■□□□□ 0.58
ACTB-207ENST00000462494 GREB1LQ9C091 1923 aaPredicted RBP18.66■□□□□ 0.58
ACTB-207ENST00000462494 SPDYE3A6NKU9 549 aa18.66■□□□□ 0.58
ACTB-207ENST00000462494 F5H6K3 240 aa18.66■□□□□ 0.58
ACTB-207ENST00000462494 CETN3O15182 167 aa18.66■□□□□ 0.58
ACTB-207ENST00000462494 SYF2O95926 243 aaKnown RBP18.66■□□□□ 0.58
ACTB-207ENST00000462494 NR2F2P24468 414 aa18.66■□□□□ 0.58
ACTB-207ENST00000462494 KLRC3Q07444 240 aa18.66■□□□□ 0.58
ACTB-207ENST00000462494 AP3B2Q13367 1082 aa18.66■□□□□ 0.58
ACTB-207ENST00000462494 SH3BP5LQ7L8J4 393 aa18.66■□□□□ 0.58
ACTB-207ENST00000462494 SIAH1Q8IUQ4 282 aa18.66■□□□□ 0.58
ACTB-207ENST00000462494 FAM133AQ8N9E0 248 aa18.66■□□□□ 0.58
ACTB-207ENST00000462494 RIN2Q8WYP3 895 aaPredicted RBP18.66■□□□□ 0.58
ACTB-207ENST00000462494 TRERF1Q96PN7 1200 aa18.66■□□□□ 0.58
ACTB-207ENST00000462494 AMNQ9BXJ7 453 aa18.66■□□□□ 0.58
ACTB-207ENST00000462494 ZNF219Q9P2Y4 722 aaPredicted RBP18.66■□□□□ 0.58
ACTB-207ENST00000462494 DNM3Q9UQ16 869 aa18.66■□□□□ 0.58
ACTB-207ENST00000462494 PAFAH1B1P43034 410 aa18.65■□□□□ 0.58
ACTB-207ENST00000462494 KCNH2Q12809 1159 aa18.65■□□□□ 0.58
ACTB-207ENST00000462494 KLHDC7AQ5VTJ3 777 aa18.65■□□□□ 0.58
ACTB-207ENST00000462494 LEKR1Q6ZMV7 388 aa18.65■□□□□ 0.58
ACTB-207ENST00000462494 FBXO11Q86XK2 927 aa18.65■□□□□ 0.58
ACTB-207ENST00000462494 ERMNQ8TAM6 284 aa18.65■□□□□ 0.58
ACTB-207ENST00000462494 ETNPPLQ8TBG4 499 aa18.65■□□□□ 0.58
ACTB-207ENST00000462494 SYN2Q92777 582 aaPredicted RBP18.65■□□□□ 0.58
ACTB-207ENST00000462494 TLR10Q9BXR5 811 aa18.65■□□□□ 0.58
ACTB-207ENST00000462494 DMGDHQ9UI17 866 aaKnown RBP18.65■□□□□ 0.58
ACTB-207ENST00000462494 AARSP49588 968 aaKnown RBP eCLIP18.65■□□□□ 0.586e-51■□□□□ 10.8
ACTB-207ENST00000462494 PODNQ7Z5L7 613 aa18.65■□□□□ 0.58
ACTB-207ENST00000462494 GOLGA6L1Q8N7Z2 621 aa18.65■□□□□ 0.58
ACTB-207ENST00000462494 MS4A14Q96JA4 679 aa18.65■□□□□ 0.58
ACTB-207ENST00000462494 MBOAT7Q96N66 472 aa18.65■□□□□ 0.58
ACTB-207ENST00000462494 POLD4Q9HCU8 107 aa18.65■□□□□ 0.58
ACTB-207ENST00000462494 FAM184BQ9ULE4 1060 aa18.65■□□□□ 0.58
ACTB-207ENST00000462494 FAM86B1E9PN63 330 aa18.64■□□□□ 0.57
ACTB-207ENST00000462494 FAM86B2P0C5J1 330 aa18.64■□□□□ 0.57
ACTB-207ENST00000462494 HOXA13P31271 388 aaPredicted RBP18.64■□□□□ 0.57
ACTB-207ENST00000462494 ACTN2P35609 894 aa18.64■□□□□ 0.57
ACTB-207ENST00000462494 PDE6BP35913 854 aa18.64■□□□□ 0.57
ACTB-207ENST00000462494 GGCXP38435 758 aa18.64■□□□□ 0.57
ACTB-207ENST00000462494 MARSP56192 900 aaKnown RBP18.64■□□□□ 0.57
ACTB-207ENST00000462494 CYP4A11Q02928 519 aa18.64■□□□□ 0.57
ACTB-207ENST00000462494 SPIRE1Q08AE8 756 aa18.64■□□□□ 0.57
ACTB-207ENST00000462494 KLHL30Q0D2K2 578 aa18.64■□□□□ 0.57
ACTB-207ENST00000462494 GIT2Q14161 759 aa18.64■□□□□ 0.57
ACTB-207ENST00000462494 ARHGAP27Q6ZUM4 889 aa18.64■□□□□ 0.57
ACTB-207ENST00000462494 NLGN1Q8N2Q7 840 aa18.64■□□□□ 0.57
ACTB-207ENST00000462494 RNF10Q8N5U6 811 aaKnown RBP18.64■□□□□ 0.57
ACTB-207ENST00000462494 GOLGA5Q8TBA6 731 aa18.64■□□□□ 0.57
ACTB-207ENST00000462494 REEP2Q9BRK0 252 aa18.64■□□□□ 0.57
ACTB-207ENST00000462494 LUC7LQ9NQ29 371 aaKnown RBP18.64■□□□□ 0.57
ACTB-207ENST00000462494 ADAMTS1Q9UHI8 967 aa18.64■□□□□ 0.57
ACTB-207ENST00000462494 PITPNM2Q9BZ72 1349 aa18.64■□□□□ 0.57
ACTB-207ENST00000462494 FRMD3A2A2Y4 597 aa18.64■□□□□ 0.57
ACTB-207ENST00000462494 RBAK-RBAKDNI3L0D1 243 aa18.64■□□□□ 0.57
ACTB-207ENST00000462494 PALMO75781 387 aa18.64■□□□□ 0.57
ACTB-207ENST00000462494 ACTN1P12814 892 aa18.64■□□□□ 0.57
ACTB-207ENST00000462494 ABCB5Q2M3G0 1257 aa18.64■□□□□ 0.57
ACTB-207ENST00000462494 ZNF572Q7Z3I7 529 aaPredicted RBP18.64■□□□□ 0.57
ACTB-207ENST00000462494 SFR1Q86XK3 245 aa18.64■□□□□ 0.57
ACTB-207ENST00000462494 MASTLQ96GX5 879 aa18.64■□□□□ 0.57
ACTB-207ENST00000462494 HDAC9Q9UKV0 1011 aa18.64■□□□□ 0.57
ACTB-207ENST00000462494 NDUFB10O96000 172 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms