RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 CCDC39Q9UFE4 941 aa17.09■□□□□ 0.33
TMEM39A-203ENST00000461654 HOOK1Q9UJC3 728 aaKnown RBP17.09■□□□□ 0.33
TMEM39A-203ENST00000461654 ZHX1Q9UKY1 873 aaPredicted RBP17.09■□□□□ 0.33
TMEM39A-203ENST00000461654 HPSEQ9Y251 543 aa17.09■□□□□ 0.33
TMEM39A-203ENST00000461654 LOC102724159A0A0B4J2E5 919 aa17.08■□□□□ 0.32
TMEM39A-203ENST00000461654 FAM86B1E9PN63 330 aa17.08■□□□□ 0.32
TMEM39A-203ENST00000461654 ZNF202O95125 648 aa17.08■□□□□ 0.32
TMEM39A-203ENST00000461654 FAM86B2P0C5J1 330 aa17.08■□□□□ 0.32
TMEM39A-203ENST00000461654 MAGEA10P43363 369 aaPredicted RBP17.08■□□□□ 0.32
TMEM39A-203ENST00000461654 ATN1P54259 1190 aaPredicted RBP17.08■□□□□ 0.32
TMEM39A-203ENST00000461654 RTP1P59025 263 aa17.08■□□□□ 0.32
TMEM39A-203ENST00000461654 PWP2Q15269 919 aaKnown RBP17.08■□□□□ 0.32
TMEM39A-203ENST00000461654 IL17AQ16552 155 aa17.08■□□□□ 0.32
TMEM39A-203ENST00000461654 ZSCAN23Q3MJ62 389 aa17.08■□□□□ 0.32
TMEM39A-203ENST00000461654 CCSAPQ6IQ19 270 aaPredicted RBP17.08■□□□□ 0.32
TMEM39A-203ENST00000461654 NLRX1Q86UT6 975 aa17.08■□□□□ 0.32
TMEM39A-203ENST00000461654 MORC4Q8TE76 937 aa17.08■□□□□ 0.32
TMEM39A-203ENST00000461654 TIGD1Q96MW7 591 aa17.08■□□□□ 0.32
TMEM39A-203ENST00000461654 IWS1Q96ST2 819 aa17.08■□□□□ 0.32
TMEM39A-203ENST00000461654 CLSTN2Q9H4D0 955 aa17.08■□□□□ 0.32
TMEM39A-203ENST00000461654 KCNMB3Q9NPA1 279 aa17.08■□□□□ 0.32
TMEM39A-203ENST00000461654 USP25Q9UHP3 1055 aa17.08■□□□□ 0.32
TMEM39A-203ENST00000461654 STK24Q9Y6E0 443 aa17.08■□□□□ 0.32
TMEM39A-203ENST00000461654 MEIS1O00470 390 aa17.07■□□□□ 0.32
TMEM39A-203ENST00000461654 STAM2O75886 525 aa17.07■□□□□ 0.32
TMEM39A-203ENST00000461654 NR3C2P08235 984 aa17.07■□□□□ 0.32
TMEM39A-203ENST00000461654 CST5P28325 142 aaPredicted RBP17.07■□□□□ 0.32
TMEM39A-203ENST00000461654 SNW1Q13573 536 aaKnown RBP17.07■□□□□ 0.32
TMEM39A-203ENST00000461654 CCDC144BQ3MJ40 725 aa17.07■□□□□ 0.32
TMEM39A-203ENST00000461654 KANK3Q6NY19 840 aa17.07■□□□□ 0.32
TMEM39A-203ENST00000461654 EPSTI1Q96J88 318 aa17.07■□□□□ 0.32
TMEM39A-203ENST00000461654 UPF3AQ9H1J1 476 aaKnown RBP17.07■□□□□ 0.32
TMEM39A-203ENST00000461654 SMCHD1A6NHR9 2005 aa17.07■□□□□ 0.32
TMEM39A-203ENST00000461654 ASTN1O14525 1302 aa17.06■□□□□ 0.32
TMEM39A-203ENST00000461654 SYNRGQ9UMZ2 1314 aa17.06■□□□□ 0.32
TMEM39A-203ENST00000461654 IGLV3-22A0A075B6J6 115 aa17.06■□□□□ 0.32
TMEM39A-203ENST00000461654 MOXD2PA6NHM9 499 aa17.06■□□□□ 0.32
TMEM39A-203ENST00000461654 MSH4O15457 936 aa17.06■□□□□ 0.32
TMEM39A-203ENST00000461654 POLR2DO15514 142 aaKnown RBP17.06■□□□□ 0.32
TMEM39A-203ENST00000461654 MYCNP04198 464 aaPredicted RBP17.06■□□□□ 0.32
TMEM39A-203ENST00000461654 GJA9P57773 515 aa17.06■□□□□ 0.32
TMEM39A-203ENST00000461654 KRT79Q5XKE5 535 aa17.06■□□□□ 0.32
TMEM39A-203ENST00000461654 CABP7Q86V35 215 aa17.06■□□□□ 0.32
TMEM39A-203ENST00000461654 CEP57L1Q8IYX8 460 aa17.06■□□□□ 0.32
TMEM39A-203ENST00000461654 IGSF22Q8N9C0 903 aa17.06■□□□□ 0.32
TMEM39A-203ENST00000461654 IQUBQ8NA54 791 aa17.06■□□□□ 0.32
TMEM39A-203ENST00000461654 CNNM3Q8NE01 707 aa17.06■□□□□ 0.32
TMEM39A-203ENST00000461654 ERMNQ8TAM6 284 aa17.06■□□□□ 0.32
TMEM39A-203ENST00000461654 HAS1Q92839 578 aa17.06■□□□□ 0.32
TMEM39A-203ENST00000461654 LENG9Q96B70 501 aa17.06■□□□□ 0.32
TMEM39A-203ENST00000461654 CALML4Q96GE6 196 aa17.06■□□□□ 0.32
TMEM39A-203ENST00000461654 CDK5RAP3Q96JB5 506 aa17.06■□□□□ 0.32
TMEM39A-203ENST00000461654 ZNF577Q9BSK1 485 aa17.06■□□□□ 0.32
TMEM39A-203ENST00000461654 JADE2Q9NQC1 790 aa17.06■□□□□ 0.32
TMEM39A-203ENST00000461654 UBIAD1Q9Y5Z9 338 aa17.06■□□□□ 0.32
TMEM39A-203ENST00000461654 MAFGO15525 162 aa17.05■□□□□ 0.32
TMEM39A-203ENST00000461654 ACLYP53396 1101 aa17.05■□□□□ 0.32
TMEM39A-203ENST00000461654 PDE4DQ08499 809 aa17.05■□□□□ 0.32
TMEM39A-203ENST00000461654 MTMR1Q13613 665 aa17.05■□□□□ 0.32
TMEM39A-203ENST00000461654 STXBP2Q15833 593 aa17.05■□□□□ 0.32
TMEM39A-203ENST00000461654 CAMK4Q16566 473 aa17.05■□□□□ 0.32
TMEM39A-203ENST00000461654 GNPTABQ3T906 1256 aa17.05■□□□□ 0.32
TMEM39A-203ENST00000461654 LRCH2Q5VUJ6 765 aa17.05■□□□□ 0.32
TMEM39A-203ENST00000461654 USP49Q70CQ1 688 aa17.05■□□□□ 0.32
TMEM39A-203ENST00000461654 VSIG10LQ86VR7 867 aa17.05■□□□□ 0.32
TMEM39A-203ENST00000461654 PDILTQ8N807 584 aa17.05■□□□□ 0.32
TMEM39A-203ENST00000461654 PCSK9Q8NBP7 692 aaKnown RBP17.05■□□□□ 0.32
TMEM39A-203ENST00000461654 IL31RAQ8NI17 732 aa17.05■□□□□ 0.32
TMEM39A-203ENST00000461654 CYP2W1Q8TAV3 490 aa17.05■□□□□ 0.32
TMEM39A-203ENST00000461654 ETNPPLQ8TBG4 499 aa17.05■□□□□ 0.32
TMEM39A-203ENST00000461654 LENG1Q96BZ8 264 aaPredicted RBP17.05■□□□□ 0.32
TMEM39A-203ENST00000461654 CDHR1Q96JP9 859 aa17.05■□□□□ 0.32
TMEM39A-203ENST00000461654 PURBQ96QR8 312 aaKnown RBP17.05■□□□□ 0.32
TMEM39A-203ENST00000461654 PANK2Q9BZ23 570 aa17.05■□□□□ 0.32
TMEM39A-203ENST00000461654 WDR11Q9BZH6 1224 aa17.05■□□□□ 0.32
TMEM39A-203ENST00000461654 CCSER1Q9C0I3 900 aa17.05■□□□□ 0.32
TMEM39A-203ENST00000461654 SPC25Q9HBM1 224 aa17.05■□□□□ 0.32
TMEM39A-203ENST00000461654 TCEAL9Q9UHQ7 104 aa17.05■□□□□ 0.32
TMEM39A-203ENST00000461654 MYH7BA7E2Y1 1941 aa17.04■□□□□ 0.32
TMEM39A-203ENST00000461654 A0A1W2PQ45 241 aaPredicted RBP17.04■□□□□ 0.32
TMEM39A-203ENST00000461654 A0A1W2PQY0 241 aa17.04■□□□□ 0.32
TMEM39A-203ENST00000461654 SYCE3A1L190 88 aa17.04■□□□□ 0.32
TMEM39A-203ENST00000461654 ADCY6O43306 1168 aa17.04■□□□□ 0.32
TMEM39A-203ENST00000461654 SLC26A4O43511 780 aa17.04■□□□□ 0.32
TMEM39A-203ENST00000461654 GAS7O60861 476 aa17.04■□□□□ 0.32
TMEM39A-203ENST00000461654 ITGB5P18084 799 aa17.04■□□□□ 0.32
TMEM39A-203ENST00000461654 ALDH5A1P51649 535 aaPredicted RBP17.04■□□□□ 0.32
TMEM39A-203ENST00000461654 MRPS9P82933 396 aaKnown RBP17.04■□□□□ 0.32
TMEM39A-203ENST00000461654 ZRSR1Q15695 479 aaKnown RBP17.04■□□□□ 0.32
TMEM39A-203ENST00000461654 KCNA10Q16322 511 aa17.04■□□□□ 0.32
TMEM39A-203ENST00000461654 LRIT3Q3SXY7 679 aa17.04■□□□□ 0.32
TMEM39A-203ENST00000461654 TRIM60Q495X7 471 aa17.04■□□□□ 0.32
TMEM39A-203ENST00000461654 IQSEC1Q6DN90 963 aa17.04■□□□□ 0.32
TMEM39A-203ENST00000461654 KRBA2Q6ZNG9 492 aa17.04■□□□□ 0.32
TMEM39A-203ENST00000461654 SLC5A5Q92911 643 aa17.04■□□□□ 0.32
TMEM39A-203ENST00000461654 DHX58Q96C10 678 aa17.04■□□□□ 0.32
TMEM39A-203ENST00000461654 GPRASP2Q96D09 838 aa17.04■□□□□ 0.32
TMEM39A-203ENST00000461654 RIT2Q99578 217 aa17.04■□□□□ 0.32
TMEM39A-203ENST00000461654 TEKT3Q9BXF9 490 aa17.04■□□□□ 0.32
TMEM39A-203ENST00000461654 UBE2OQ9C0C9 1292 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms