RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 JAKMIP3Q5VZ66 844 aa17.76■□□□□ 0.43
NUP50-213ENST00000461437 SERINC5Q86VE9 423 aa17.76■□□□□ 0.43
NUP50-213ENST00000461437 PHKBQ93100 1093 aa17.76■□□□□ 0.43
NUP50-213ENST00000461437 ZBTB10Q96DT7 871 aa17.76■□□□□ 0.43
NUP50-213ENST00000461437 SENP7Q9BQF6 1050 aa17.76■□□□□ 0.43
NUP50-213ENST00000461437 USP26Q9BXU7 913 aa17.76■□□□□ 0.43
NUP50-213ENST00000461437 JADE2Q9NQC1 790 aa17.76■□□□□ 0.43
NUP50-213ENST00000461437 BARHL2Q9NY43 387 aa17.76■□□□□ 0.43
NUP50-213ENST00000461437 PCDHA11Q9Y5I1 949 aa17.76■□□□□ 0.43
NUP50-213ENST00000461437 PRRC2BQ5JSZ5 2229 aaKnown RBP17.75■□□□□ 0.43
NUP50-213ENST00000461437 LCHNA4D1U4 455 aa17.75■□□□□ 0.43
NUP50-213ENST00000461437 CXCL10P02778 98 aa17.75■□□□□ 0.43
NUP50-213ENST00000461437 HOXC8P31273 242 aa17.75■□□□□ 0.43
NUP50-213ENST00000461437 CCT2P78371 535 aaKnown RBP17.75■□□□□ 0.43
NUP50-213ENST00000461437 ARHGAP4P98171 946 aa17.75■□□□□ 0.43
NUP50-213ENST00000461437 FAM117BQ6P1L5 589 aa17.75■□□□□ 0.43
NUP50-213ENST00000461437 HERC6Q8IVU3 1022 aa17.75■□□□□ 0.43
NUP50-213ENST00000461437 SLC9A7Q96T83 725 aa17.75■□□□□ 0.43
NUP50-213ENST00000461437 GAS2L1Q99501 681 aaPredicted RBP17.75■□□□□ 0.43
NUP50-213ENST00000461437 NCOA5Q9HCD5 579 aaKnown RBP17.75■□□□□ 0.43
NUP50-213ENST00000461437 EVPLQ92817 2033 aa17.74■□□□□ 0.43
NUP50-213ENST00000461437 EPOPA6NHQ4 379 aa17.74■□□□□ 0.43
NUP50-213ENST00000461437 DTNBO60941 627 aa17.74■□□□□ 0.43
NUP50-213ENST00000461437 REC8O95072 547 aa17.74■□□□□ 0.43
NUP50-213ENST00000461437 KCNJ6P48051 423 aa17.74■□□□□ 0.43
NUP50-213ENST00000461437 CLK2P49760 499 aaKnown RBP17.74■□□□□ 0.43
NUP50-213ENST00000461437 PKN1Q16512 942 aa17.74■□□□□ 0.43
NUP50-213ENST00000461437 PFKFB3Q16875 520 aaPredicted RBP17.74■□□□□ 0.43
NUP50-213ENST00000461437 PPP1R18Q6NYC8 613 aa17.74■□□□□ 0.43
NUP50-213ENST00000461437 CNKSR3Q6P9H4 555 aa17.74■□□□□ 0.43
NUP50-213ENST00000461437 RUFY4Q6ZNE9 571 aa17.74■□□□□ 0.43
NUP50-213ENST00000461437 RASGRP4Q8TDF6 673 aa17.74■□□□□ 0.43
NUP50-213ENST00000461437 LMBR1Q8WVP7 490 aa17.74■□□□□ 0.43
NUP50-213ENST00000461437 MXRA8Q9BRK3 442 aa17.74■□□□□ 0.43
NUP50-213ENST00000461437 MYH9P35579 1960 aaKnown RBP17.73■□□□□ 0.43
NUP50-213ENST00000461437 RSPH10B2B2RC85 870 aa17.73■□□□□ 0.43
NUP50-213ENST00000461437 DDX39AO00148 427 aaKnown RBP17.73■□□□□ 0.43
NUP50-213ENST00000461437 RSPH10BP0C881 870 aa17.73■□□□□ 0.43
NUP50-213ENST00000461437 SCG2P13521 617 aa17.73■□□□□ 0.43
NUP50-213ENST00000461437 TOB2Q14106 344 aaPredicted RBP17.73■□□□□ 0.43
NUP50-213ENST00000461437 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.73■□□□□ 0.43
NUP50-213ENST00000461437 MICALL1Q8N3F8 863 aa17.73■□□□□ 0.43
NUP50-213ENST00000461437 PCYT2Q99447 389 aa17.73■□□□□ 0.43
NUP50-213ENST00000461437 KCNH7Q9NS40 1196 aa17.73■□□□□ 0.43
NUP50-213ENST00000461437 ZNF215Q9UL58 517 aaPredicted RBP17.73■□□□□ 0.43
NUP50-213ENST00000461437 REV3LO60673 3130 aa17.72■□□□□ 0.43
NUP50-213ENST00000461437 NID2Q14112 1375 aa17.72■□□□□ 0.43
NUP50-213ENST00000461437 BAIAP3O94812 1187 aa17.72■□□□□ 0.43
NUP50-213ENST00000461437 IGBP1P78318 339 aa17.72■□□□□ 0.43
NUP50-213ENST00000461437 ITGB3BPQ13352 177 aaPredicted RBP17.72■□□□□ 0.43
NUP50-213ENST00000461437 KRT40Q6A162 431 aa17.72■□□□□ 0.43
NUP50-213ENST00000461437 GIMAP8Q8ND71 665 aaPredicted RBP17.72■□□□□ 0.43
NUP50-213ENST00000461437 DBF4BQ8NFT6 615 aa17.72■□□□□ 0.43
NUP50-213ENST00000461437 SEPT1Q8WYJ6 367 aa17.72■□□□□ 0.43
NUP50-213ENST00000461437 CDHR1Q96JP9 859 aa17.72■□□□□ 0.43
NUP50-213ENST00000461437 SLC26A6Q9BXS9 759 aa17.72■□□□□ 0.43
NUP50-213ENST00000461437 AGXT2Q9BYV1 514 aa17.72■□□□□ 0.43
NUP50-213ENST00000461437 UPF3BQ9BZI7 483 aaKnown RBP17.72■□□□□ 0.43
NUP50-213ENST00000461437 EHMT1Q9H9B1 1298 aa17.72■□□□□ 0.43
NUP50-213ENST00000461437 SPTBN5Q9NRC6 3674 aaKnown RBP17.71■□□□□ 0.43
NUP50-213ENST00000461437 TLL1O43897 1013 aa17.71■□□□□ 0.43
NUP50-213ENST00000461437 LGR5O75473 907 aa17.71■□□□□ 0.43
NUP50-213ENST00000461437 PDIA3P30101 505 aaKnown RBP17.71■□□□□ 0.43
NUP50-213ENST00000461437 SREBF1P36956 1147 aa17.71■□□□□ 0.43
NUP50-213ENST00000461437 RCAN1P53805 252 aa17.71■□□□□ 0.43
NUP50-213ENST00000461437 ADAM17P78536 824 aa17.71■□□□□ 0.43
NUP50-213ENST00000461437 NTRK3Q16288 839 aa17.71■□□□□ 0.43
NUP50-213ENST00000461437 ARNTL2Q8WYA1 636 aa17.71■□□□□ 0.43
NUP50-213ENST00000461437 GLG1Q92896 1179 aa17.71■□□□□ 0.43
NUP50-213ENST00000461437 AGO4Q9HCK5 861 aaKnown RBP17.71■□□□□ 0.43
NUP50-213ENST00000461437 JPH1Q9HDC5 661 aaPredicted RBP17.71■□□□□ 0.43
NUP50-213ENST00000461437 VPS54Q9P1Q0 977 aa17.71■□□□□ 0.43
NUP50-213ENST00000461437 TCF20Q9UGU0 1960 aaKnown RBP17.71■□□□□ 0.43
NUP50-213ENST00000461437 NLRC5Q86WI3 1866 aa17.71■□□□□ 0.43
NUP50-213ENST00000461437 FAM86B1E9PN63 330 aa17.7■□□□□ 0.42
NUP50-213ENST00000461437 hCG_1984214I3L0E3 225 aa17.7■□□□□ 0.42
NUP50-213ENST00000461437 FAM86B2P0C5J1 330 aa17.7■□□□□ 0.42
NUP50-213ENST00000461437 PSMA5P28066 241 aa17.7■□□□□ 0.42
NUP50-213ENST00000461437 ZNF76P36508 570 aa17.7■□□□□ 0.42
NUP50-213ENST00000461437 TAP1Q03518 808 aa17.7■□□□□ 0.42
NUP50-213ENST00000461437 PPFIA1Q13136 1202 aa17.7■□□□□ 0.42
NUP50-213ENST00000461437 CEP55Q53EZ4 464 aa17.7■□□□□ 0.42
NUP50-213ENST00000461437 RUFY3Q7L099 469 aa17.7■□□□□ 0.42
NUP50-213ENST00000461437 ZNF713Q8N859 430 aaPredicted RBP17.7■□□□□ 0.42
NUP50-213ENST00000461437 PHOSPHO2Q8TCD6 241 aa17.7■□□□□ 0.42
NUP50-213ENST00000461437 TRAPPC12Q8WVT3 735 aa17.7■□□□□ 0.42
NUP50-213ENST00000461437 ZBED2Q9BTP6 218 aa17.7■□□□□ 0.42
NUP50-213ENST00000461437 SLC9A2Q9UBY0 812 aa17.7■□□□□ 0.42
NUP50-213ENST00000461437 CCDC196A0A1B0GTZ2 297 aa17.69■□□□□ 0.42
NUP50-213ENST00000461437 PRPF3O43395 683 aaKnown RBP17.69■□□□□ 0.42
NUP50-213ENST00000461437 FOSP01100 380 aaPredicted RBP17.69■□□□□ 0.42
NUP50-213ENST00000461437 ACTR2P61160 394 aa17.69■□□□□ 0.42
NUP50-213ENST00000461437 STK3Q13188 491 aa17.69■□□□□ 0.42
NUP50-213ENST00000461437 AP3B2Q13367 1082 aa17.69■□□□□ 0.42
NUP50-213ENST00000461437 IKBKEQ14164 716 aa17.69■□□□□ 0.42
NUP50-213ENST00000461437 GRIK4Q16099 956 aa17.69■□□□□ 0.42
NUP50-213ENST00000461437 ZSWIM6Q9HCJ5 1215 aa17.69■□□□□ 0.42
NUP50-213ENST00000461437 PPP4R2Q9NY27 417 aa17.69■□□□□ 0.42
NUP50-213ENST00000461437 MTUS1Q9ULD2 1270 aa17.69■□□□□ 0.42
NUP50-213ENST00000461437 ABHD14A-ACY1A0A1B0GW23 586 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms