RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 USP19O94966 1318 aa9.68□□□□□ -0.86
BRCA1-205ENST00000461221 USP14P54578 494 aa9.68□□□□□ -0.86
BRCA1-205ENST00000461221 DR1Q01658 176 aa9.68□□□□□ -0.86
BRCA1-205ENST00000461221 KIAA1841Q6NSI8 718 aa9.68□□□□□ -0.86
BRCA1-205ENST00000461221 DCPSQ96C86 337 aaKnown RBP9.68□□□□□ -0.86
BRCA1-205ENST00000461221 CALR3Q96L12 384 aaKnown RBP9.68□□□□□ -0.86
BRCA1-205ENST00000461221 COPG1Q9Y678 874 aaKnown RBP9.68□□□□□ -0.86
BRCA1-205ENST00000461221 SNX2O60749 519 aa9.68□□□□□ -0.86
BRCA1-205ENST00000461221 MOCS3O95396 460 aa9.68□□□□□ -0.86
BRCA1-205ENST00000461221 SERPING1P05155 500 aa9.68□□□□□ -0.86
BRCA1-205ENST00000461221 OSBPP22059 807 aa9.68□□□□□ -0.86
BRCA1-205ENST00000461221 NDUFA8P51970 172 aa9.68□□□□□ -0.86
BRCA1-205ENST00000461221 C2orf54Q08AI8 447 aa9.68□□□□□ -0.86
BRCA1-205ENST00000461221 DRP2Q13474 957 aa9.68□□□□□ -0.86
BRCA1-205ENST00000461221 ZNF658Q5TYW1 1059 aaPredicted RBP9.68□□□□□ -0.86
BRCA1-205ENST00000461221 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.68□□□□□ -0.86
BRCA1-205ENST00000461221 CEP70Q8NHQ1 597 aa9.68□□□□□ -0.86
BRCA1-205ENST00000461221 PI4K2BQ8TCG2 481 aa9.68□□□□□ -0.86
BRCA1-205ENST00000461221 N4BP2L2Q92802 583 aaPredicted RBP9.68□□□□□ -0.86
BRCA1-205ENST00000461221 CCDC17Q96LX7 622 aa9.68□□□□□ -0.86
BRCA1-205ENST00000461221 PCDHA4Q9UN74 947 aa9.68□□□□□ -0.86
BRCA1-205ENST00000461221 G3BP2Q9UN86 482 aaKnown RBP9.68□□□□□ -0.86
BRCA1-205ENST00000461221 TRIM33Q9UPN9 1127 aa9.68□□□□□ -0.86
BRCA1-205ENST00000461221 PCDHA1Q9Y5I3 950 aa9.68□□□□□ -0.86
BRCA1-205ENST00000461221 ANP32DO95626 131 aa9.67□□□□□ -0.86
BRCA1-205ENST00000461221 ABCB5Q2M3G0 1257 aa9.67□□□□□ -0.86
BRCA1-205ENST00000461221 TMEM259Q4ZIN3 620 aa9.67□□□□□ -0.86
BRCA1-205ENST00000461221 TDRD7Q8NHU6 1098 aaKnown RBP9.67□□□□□ -0.86
BRCA1-205ENST00000461221 FMO2Q99518 471 aa9.67□□□□□ -0.86
BRCA1-205ENST00000461221 NOVA2Q9UNW9 492 aaKnown RBP9.67□□□□□ -0.86
BRCA1-205ENST00000461221 ADCY9O60503 1353 aa9.67□□□□□ -0.86
BRCA1-205ENST00000461221 SERPINI2O75830 405 aa9.67□□□□□ -0.86
BRCA1-205ENST00000461221 OCM2P0CE71 109 aa9.67□□□□□ -0.86
BRCA1-205ENST00000461221 OCMP0CE72 109 aaPredicted RBP9.67□□□□□ -0.86
BRCA1-205ENST00000461221 CA4P22748 312 aa9.67□□□□□ -0.86
BRCA1-205ENST00000461221 CCND2P30279 289 aa9.67□□□□□ -0.86
BRCA1-205ENST00000461221 BTDP43251 543 aa9.67□□□□□ -0.86
BRCA1-205ENST00000461221 CYP4A11Q02928 519 aa9.67□□□□□ -0.86
BRCA1-205ENST00000461221 NR1H3Q13133 447 aa9.67□□□□□ -0.86
BRCA1-205ENST00000461221 CAPRIN1Q14444 709 aaKnown RBP9.67□□□□□ -0.86
BRCA1-205ENST00000461221 SPARCL1Q14515 664 aa9.67□□□□□ -0.86
BRCA1-205ENST00000461221 BBS9Q3SYG4 887 aa9.67□□□□□ -0.86
BRCA1-205ENST00000461221 DPY19L2Q6NUT2 758 aa9.67□□□□□ -0.86
BRCA1-205ENST00000461221 HIBCHQ6NVY1 386 aaPredicted RBP9.67□□□□□ -0.86
BRCA1-205ENST00000461221 TESK2Q96S53 571 aa9.67□□□□□ -0.86
BRCA1-205ENST00000461221 KLC2Q9H0B6 622 aa9.67□□□□□ -0.86
BRCA1-205ENST00000461221 ZSWIM6Q9HCJ5 1215 aa9.67□□□□□ -0.86
BRCA1-205ENST00000461221 ABCF3Q9NUQ8 709 aa9.67□□□□□ -0.86
BRCA1-205ENST00000461221 PLB1Q6P1J6 1458 aa9.67□□□□□ -0.86
BRCA1-205ENST00000461221 INO80B-WBP1J3KQ70 363 aa9.67□□□□□ -0.86
BRCA1-205ENST00000461221 ENC1O14682 589 aa9.67□□□□□ -0.86
BRCA1-205ENST00000461221 HMGB3O15347 200 aaKnown RBP9.67□□□□□ -0.86
BRCA1-205ENST00000461221 HLA-DPA1P20036 260 aa9.67□□□□□ -0.86
BRCA1-205ENST00000461221 MAP3K10Q02779 954 aa9.67□□□□□ -0.86
BRCA1-205ENST00000461221 RBL2Q08999 1139 aa9.67□□□□□ -0.86
BRCA1-205ENST00000461221 PSMD2Q13200 908 aa9.67□□□□□ -0.86
BRCA1-205ENST00000461221 ASPSCR1Q9BZE9 553 aa9.67□□□□□ -0.86
BRCA1-205ENST00000461221 INO80BQ9C086 356 aaPredicted RBP9.67□□□□□ -0.86
BRCA1-205ENST00000461221 GINM1Q9NU53 330 aa9.67□□□□□ -0.86
BRCA1-205ENST00000461221 KIF17Q9P2E2 1029 aa9.67□□□□□ -0.86
BRCA1-205ENST00000461221 TBK1Q9UHD2 729 aa9.67□□□□□ -0.86
BRCA1-205ENST00000461221 MTMR6Q9Y217 621 aa9.67□□□□□ -0.86
BRCA1-205ENST00000461221 APOBEC2Q9Y235 224 aaKnown RBP9.67□□□□□ -0.86
BRCA1-205ENST00000461221 MAP3K19Q56UN5 1328 aa9.67□□□□□ -0.86
BRCA1-205ENST00000461221 POTEB3A0JP26 581 aa9.67□□□□□ -0.86
BRCA1-205ENST00000461221 FKBP3Q00688 224 aaKnown RBP9.67□□□□□ -0.86
BRCA1-205ENST00000461221 POTEBQ6S5H4 581 aa9.67□□□□□ -0.86
BRCA1-205ENST00000461221 DPP9Q86TI2 863 aa9.67□□□□□ -0.86
BRCA1-205ENST00000461221 FLAD1Q8NFF5 587 aa9.67□□□□□ -0.86
BRCA1-205ENST00000461221 THAP9Q9H5L6 903 aa9.67□□□□□ -0.86
BRCA1-205ENST00000461221 A0A1B0GW55 424 aa9.67□□□□□ -0.86
BRCA1-205ENST00000461221 SEC31AO94979 1220 aaKnown RBP9.67□□□□□ -0.86
BRCA1-205ENST00000461221 SLFN14P0C7P3 912 aa9.67□□□□□ -0.86
BRCA1-205ENST00000461221 DUX4L2P0CJ85 424 aa9.67□□□□□ -0.86
BRCA1-205ENST00000461221 DUX4L3P0CJ86 424 aa9.67□□□□□ -0.86
BRCA1-205ENST00000461221 DUX4L4P0CJ87 422 aa9.67□□□□□ -0.86
BRCA1-205ENST00000461221 DUX4L5P0CJ88 424 aa9.67□□□□□ -0.86
BRCA1-205ENST00000461221 DUX4L6P0CJ89 424 aa9.67□□□□□ -0.86
BRCA1-205ENST00000461221 DUX4L7P0CJ90 424 aa9.67□□□□□ -0.86
BRCA1-205ENST00000461221 DDX5P17844 614 aaKnown RBP9.67□□□□□ -0.86
BRCA1-205ENST00000461221 KRT27Q7Z3Y8 459 aa9.67□□□□□ -0.86
BRCA1-205ENST00000461221 CLIC6Q96NY7 704 aa9.67□□□□□ -0.86
BRCA1-205ENST00000461221 TRPV6Q9H1D0 765 aa9.67□□□□□ -0.86
BRCA1-205ENST00000461221 DUX4Q9UBX2 424 aa9.67□□□□□ -0.86
BRCA1-205ENST00000461221 INTUQ9ULD6 942 aa9.67□□□□□ -0.86
BRCA1-205ENST00000461221 ARHGAP26Q9UNA1 814 aa9.67□□□□□ -0.86
BRCA1-205ENST00000461221 MAGED2Q9UNF1 606 aaPredicted RBP9.67□□□□□ -0.86
BRCA1-205ENST00000461221 CCDC151A5D8V7 595 aa9.66□□□□□ -0.86
BRCA1-205ENST00000461221 TCP10L2B9ZVM9 353 aa9.66□□□□□ -0.86
BRCA1-205ENST00000461221 COPEO14579 308 aa9.66□□□□□ -0.86
BRCA1-205ENST00000461221 PPP1R12AO14974 1030 aaPredicted RBP9.66□□□□□ -0.86
BRCA1-205ENST00000461221 HSPD1P10809 573 aaKnown RBP9.66□□□□□ -0.86
BRCA1-205ENST00000461221 MED21Q13503 144 aa9.66□□□□□ -0.86
BRCA1-205ENST00000461221 PRAG1Q86YV5 1406 aa9.66□□□□□ -0.86
BRCA1-205ENST00000461221 ALKBH8Q96BT7 664 aaKnown RBP9.66□□□□□ -0.86
BRCA1-205ENST00000461221 GIMAP4Q9NUV9 329 aa9.66□□□□□ -0.86
BRCA1-205ENST00000461221 GCNT4Q9P109 453 aa9.66□□□□□ -0.86
BRCA1-205ENST00000461221 RGS12O14924 1447 aa9.66□□□□□ -0.86
BRCA1-205ENST00000461221 PNMA6EA0A0J9YXQ4 647 aa9.66□□□□□ -0.86
BRCA1-205ENST00000461221 BTBD18B2RXH4 712 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms