RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 ESYT1Q9BSJ8 1104 aa16.92■□□□□ 0.3
SMPD4-216ENST00000461187 ZNF215Q9UL58 517 aaPredicted RBP16.92■□□□□ 0.3
SMPD4-216ENST00000461187 ATP9AO75110 1047 aa16.91■□□□□ 0.3
SMPD4-216ENST00000461187 CTSHP09668 335 aa16.91■□□□□ 0.3
SMPD4-216ENST00000461187 SP4Q02446 784 aa16.91■□□□□ 0.3
SMPD4-216ENST00000461187 NECTIN1Q15223 517 aa16.91■□□□□ 0.3
SMPD4-216ENST00000461187 NLRX1Q86UT6 975 aa16.91■□□□□ 0.3
SMPD4-216ENST00000461187 GIMAP8Q8ND71 665 aaPredicted RBP16.91■□□□□ 0.3
SMPD4-216ENST00000461187 SP7Q8TDD2 431 aaPredicted RBP16.91■□□□□ 0.3
SMPD4-216ENST00000461187 LMBR1Q8WVP7 490 aa16.91■□□□□ 0.3
SMPD4-216ENST00000461187 SEPT8Q92599 483 aa16.91■□□□□ 0.3
SMPD4-216ENST00000461187 GPRASP2Q96D09 838 aa16.91■□□□□ 0.3
SMPD4-216ENST00000461187 PSTPIP2Q9H939 334 aa16.91■□□□□ 0.3
SMPD4-216ENST00000461187 hCG_1642624A0A1W2PR95 340 aa16.9■□□□□ 0.3
SMPD4-216ENST00000461187 CALM1P0DP23 149 aa16.9■□□□□ 0.3
SMPD4-216ENST00000461187 CALM2P0DP24 149 aa16.9■□□□□ 0.3
SMPD4-216ENST00000461187 CALM3P0DP25 149 aa16.9■□□□□ 0.3
SMPD4-216ENST00000461187 KCNA2P16389 499 aa16.9■□□□□ 0.3
SMPD4-216ENST00000461187 COL9A1P20849 921 aa16.9■□□□□ 0.3
SMPD4-216ENST00000461187 ARHGAP4P98171 946 aa16.9■□□□□ 0.3
SMPD4-216ENST00000461187 FAM26DQ5JW98 314 aa16.9■□□□□ 0.3
SMPD4-216ENST00000461187 CREB3L3Q68CJ9 461 aa16.9■□□□□ 0.3
SMPD4-216ENST00000461187 RAB11FIP4Q86YS3 637 aa16.9■□□□□ 0.3
SMPD4-216ENST00000461187 TOP1MTQ969P6 601 aa16.9■□□□□ 0.3
SMPD4-216ENST00000461187 C17orf80Q9BSJ5 609 aa16.9■□□□□ 0.3
SMPD4-216ENST00000461187 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.89■□□□□ 0.29
SMPD4-216ENST00000461187 ITGB5P18084 799 aa16.89■□□□□ 0.29
SMPD4-216ENST00000461187 TCF7P36402 384 aaPredicted RBP16.89■□□□□ 0.29
SMPD4-216ENST00000461187 UBE2SQ16763 222 aa16.89■□□□□ 0.29
SMPD4-216ENST00000461187 FBXO22Q8NEZ5 403 aa16.89■□□□□ 0.29
SMPD4-216ENST00000461187 LRRC2Q9BYS8 371 aa16.89■□□□□ 0.29
SMPD4-216ENST00000461187 UBIAD1Q9Y5Z9 338 aa16.89■□□□□ 0.29
SMPD4-216ENST00000461187 SLC12A7Q9Y666 1083 aa16.89■□□□□ 0.29
SMPD4-216ENST00000461187 NRCAMQ92823 1304 aa16.89■□□□□ 0.29
SMPD4-216ENST00000461187 GSTTP1A0A1W2PQM5 241 aa16.88■□□□□ 0.29
SMPD4-216ENST00000461187 TMTC3Q6ZXV5 915 aa16.88■□□□□ 0.29
SMPD4-216ENST00000461187 SGMS1Q86VZ5 419 aa16.88■□□□□ 0.29
SMPD4-216ENST00000461187 CCDC82Q8N4S0 544 aa16.88■□□□□ 0.29
SMPD4-216ENST00000461187 FANCBQ8NB91 859 aa16.88■□□□□ 0.29
SMPD4-216ENST00000461187 CDHR1Q96JP9 859 aa16.88■□□□□ 0.29
SMPD4-216ENST00000461187 FNDC1Q4ZHG4 1894 aaPredicted RBP16.87■□□□□ 0.29
SMPD4-216ENST00000461187 UPP2O95045 317 aa16.87■□□□□ 0.29
SMPD4-216ENST00000461187 CHRNA1P02708 482 aa16.87■□□□□ 0.29
SMPD4-216ENST00000461187 RUFY4Q6ZNE9 571 aa16.87■□□□□ 0.29
SMPD4-216ENST00000461187 RPAINQ86UA6 219 aa16.87■□□□□ 0.29
SMPD4-216ENST00000461187 SEPT1Q8WYJ6 367 aa16.87■□□□□ 0.29
SMPD4-216ENST00000461187 APBB2Q92870 758 aa16.87■□□□□ 0.29
SMPD4-216ENST00000461187 IFIH1Q9BYX4 1025 aaKnown RBP16.87■□□□□ 0.29
SMPD4-216ENST00000461187 ANO2Q9NQ90 1003 aa16.87■□□□□ 0.29
SMPD4-216ENST00000461187 JADE2Q9NQC1 790 aa16.87■□□□□ 0.29
SMPD4-216ENST00000461187 PCDHA6Q9UN73 950 aa16.87■□□□□ 0.29
SMPD4-216ENST00000461187 PCDHA8Q9Y5H6 950 aa16.87■□□□□ 0.29
SMPD4-216ENST00000461187 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.86■□□□□ 0.29
SMPD4-216ENST00000461187 SPDYE3A6NKU9 549 aa16.86■□□□□ 0.29
SMPD4-216ENST00000461187 MGAT3Q09327 533 aa16.86■□□□□ 0.29
SMPD4-216ENST00000461187 MTMR1Q13613 665 aa16.86■□□□□ 0.29
SMPD4-216ENST00000461187 EPC2Q52LR7 807 aa16.86■□□□□ 0.29
SMPD4-216ENST00000461187 HEATR3Q7Z4Q2 680 aa16.86■□□□□ 0.29
SMPD4-216ENST00000461187 MICU3Q86XE3 530 aa16.86■□□□□ 0.29
SMPD4-216ENST00000461187 SAMD11Q96NU1 681 aa16.86■□□□□ 0.29
SMPD4-216ENST00000461187 YME1L1Q96TA2 773 aa16.86■□□□□ 0.29
SMPD4-216ENST00000461187 UBE2ZQ9H832 354 aaPredicted RBP16.86■□□□□ 0.29
SMPD4-216ENST00000461187 EHMT1Q9H9B1 1298 aa16.86■□□□□ 0.29
SMPD4-216ENST00000461187 ERAP1Q9NZ08 941 aa16.86■□□□□ 0.29
SMPD4-216ENST00000461187 RAPGEFL1Q9UHV5 662 aa16.86■□□□□ 0.29
SMPD4-216ENST00000461187 C5orf42Q9H799 3197 aa16.85■□□□□ 0.29
SMPD4-216ENST00000461187 MBLAC1A4D2B0 266 aaPredicted RBP16.85■□□□□ 0.29
SMPD4-216ENST00000461187 MAFGO15525 162 aa16.85■□□□□ 0.29
SMPD4-216ENST00000461187 MARK3P27448 753 aa16.85■□□□□ 0.29
SMPD4-216ENST00000461187 PPFIA1Q13136 1202 aa16.85■□□□□ 0.29
SMPD4-216ENST00000461187 GRIK4Q16099 956 aa16.85■□□□□ 0.29
SMPD4-216ENST00000461187 MARCH8Q5T0T0 291 aa16.85■□□□□ 0.29
SMPD4-216ENST00000461187 TAF2Q6P1X5 1199 aa16.85■□□□□ 0.29
SMPD4-216ENST00000461187 MRPL38Q96DV4 380 aaKnown RBP16.85■□□□□ 0.29
SMPD4-216ENST00000461187 SMARCAD1Q9H4L7 1026 aa16.85■□□□□ 0.29
SMPD4-216ENST00000461187 PKD2L1Q9P0L9 805 aa16.85■□□□□ 0.29
SMPD4-216ENST00000461187 CNTNAP5Q8WYK1 1306 aa16.85■□□□□ 0.29
SMPD4-216ENST00000461187 PLXNA4Q9HCM2 1894 aa16.84■□□□□ 0.29
SMPD4-216ENST00000461187 H3BNC9 293 aa16.84■□□□□ 0.29
SMPD4-216ENST00000461187 GHRP10912 638 aa16.84■□□□□ 0.29
SMPD4-216ENST00000461187 WWC2Q6AWC2 1192 aa16.84■□□□□ 0.29
SMPD4-216ENST00000461187 APOA5Q6Q788 366 aa16.84■□□□□ 0.29
SMPD4-216ENST00000461187 TMEM192Q8IY95 271 aa16.84■□□□□ 0.29
SMPD4-216ENST00000461187 GLG1Q92896 1179 aa16.84■□□□□ 0.29
SMPD4-216ENST00000461187 PCYT2Q99447 389 aa16.84■□□□□ 0.29
SMPD4-216ENST00000461187 TUBE1Q9UJT0 475 aa16.84■□□□□ 0.29
SMPD4-216ENST00000461187 EXOSC10Q01780 885 aaKnown RBP16.83■□□□□ 0.28
SMPD4-216ENST00000461187 FUT2Q10981 343 aa16.83■□□□□ 0.28
SMPD4-216ENST00000461187 GPM6BQ13491 265 aa16.83■□□□□ 0.28
SMPD4-216ENST00000461187 LPIN1Q14693 890 aa16.83■□□□□ 0.28
SMPD4-216ENST00000461187 BMP2KLQ5H9B9 411 aa16.83■□□□□ 0.28
SMPD4-216ENST00000461187 TYW1BQ6NUM6 668 aa16.83■□□□□ 0.28
SMPD4-216ENST00000461187 SYNE3Q6ZMZ3 975 aa16.83■□□□□ 0.28
SMPD4-216ENST00000461187 SKAP1Q86WV1 359 aa16.83■□□□□ 0.28
SMPD4-216ENST00000461187 CYP2W1Q8TAV3 490 aa16.83■□□□□ 0.28
SMPD4-216ENST00000461187 DNAJB3Q8WWF6 145 aa16.83■□□□□ 0.28
SMPD4-216ENST00000461187 NEK1Q96PY6 1258 aa16.83■□□□□ 0.28
SMPD4-216ENST00000461187 MXRA8Q9BRK3 442 aa16.83■□□□□ 0.28
SMPD4-216ENST00000461187 C1QTNF1Q9BXJ1 281 aa16.83■□□□□ 0.28
SMPD4-216ENST00000461187 EPHX3Q9H6B9 360 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms