RNA–Protein interactions for RNA: ENST00000461018.5

CNN3-204, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-204ENST00000461018 TIFAQ96CG3 184 aa5.59□□□□□ -1.51
CNN3-204ENST00000461018 RNPC3Q96LT9 517 aaKnown RBP5.59□□□□□ -1.51
CNN3-204ENST00000461018 FANCD2OSQ96PS1 177 aa5.59□□□□□ -1.51
CNN3-204ENST00000461018 METTL22Q9BUU2 404 aaPredicted RBP5.59□□□□□ -1.51
CNN3-204ENST00000461018 ATXN3LQ9H3M9 355 aa5.59□□□□□ -1.51
CNN3-204ENST00000461018 CD209Q9NNX6 404 aa5.59□□□□□ -1.51
CNN3-204ENST00000461018 PRDM5Q9NQX1 630 aaPredicted RBP5.59□□□□□ -1.51
CNN3-204ENST00000461018 ATP11BQ9Y2G3 1177 aa5.59□□□□□ -1.51
CNN3-204ENST00000461018 SPEF2Q9C093 1822 aa5.59□□□□□ -1.51
CNN3-204ENST00000461018 MAST2Q6P0Q8 1798 aa5.59□□□□□ -1.51
CNN3-204ENST00000461018 PRRC2BQ5JSZ5 2229 aaKnown RBP5.59□□□□□ -1.52
CNN3-204ENST00000461018 ZNF318Q5VUA4 2279 aa5.58□□□□□ -1.52
CNN3-204ENST00000461018 MYO1BO43795 1136 aa5.58□□□□□ -1.52
CNN3-204ENST00000461018 NEFMP07197 916 aa5.58□□□□□ -1.52
CNN3-204ENST00000461018 NME2P22392 152 aa5.58□□□□□ -1.52
CNN3-204ENST00000461018 ZEB1P37275 1124 aaPredicted RBP5.58□□□□□ -1.52
CNN3-204ENST00000461018 PPATQ06203 517 aa5.58□□□□□ -1.52
CNN3-204ENST00000461018 CDK5R2Q13319 367 aa5.58□□□□□ -1.52
CNN3-204ENST00000461018 TTLL4Q14679 1199 aa5.58□□□□□ -1.52
CNN3-204ENST00000461018 CCL14Q16627 93 aa5.58□□□□□ -1.52
CNN3-204ENST00000461018 CBLL1Q75N03 491 aa5.58□□□□□ -1.52
CNN3-204ENST00000461018 ZNF765Q7L2R6 523 aa5.58□□□□□ -1.52
CNN3-204ENST00000461018 ANKRD18AQ8IVF6 992 aa5.58□□□□□ -1.52
CNN3-204ENST00000461018 C3orf58Q8NDZ4 430 aa5.58□□□□□ -1.52
CNN3-204ENST00000461018 GRIN3AQ8TCU5 1115 aa5.58□□□□□ -1.52
CNN3-204ENST00000461018 PARK7Q99497 189 aaKnown RBP5.58□□□□□ -1.52
CNN3-204ENST00000461018 EMILIN2Q9BXX0 1053 aa5.58□□□□□ -1.52
CNN3-204ENST00000461018 PICK1Q9NRD5 415 aa5.58□□□□□ -1.52
CNN3-204ENST00000461018 CRIM1Q9NZV1 1036 aa5.58□□□□□ -1.52
CNN3-204ENST00000461018 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.58□□□□□ -1.52
CNN3-204ENST00000461018 CHD9Q3L8U1 2897 aa5.58□□□□□ -1.52
CNN3-204ENST00000461018 ZFHX4Q86UP3 3567 aa5.58□□□□□ -1.52
CNN3-204ENST00000461018 PKD1L2Q7Z442 2459 aa5.57□□□□□ -1.52
CNN3-204ENST00000461018 ARAP2Q8WZ64 1704 aa5.57□□□□□ -1.52
CNN3-204ENST00000461018 ZFHX2Q9C0A1 2572 aaPredicted RBP5.57□□□□□ -1.52
CNN3-204ENST00000461018 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.57□□□□□ -1.52
CNN3-204ENST00000461018 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.57□□□□□ -1.52
CNN3-204ENST00000461018 PRR33A8MZF0 331 aa5.57□□□□□ -1.52
CNN3-204ENST00000461018 RFXAPO00287 272 aa5.57□□□□□ -1.52
CNN3-204ENST00000461018 PAGE1O75459 146 aa5.57□□□□□ -1.52
CNN3-204ENST00000461018 MMP14P50281 582 aa5.57□□□□□ -1.52
CNN3-204ENST00000461018 KRT40Q6A162 431 aa5.57□□□□□ -1.52
CNN3-204ENST00000461018 PDZD3Q86UT5 571 aa5.57□□□□□ -1.52
CNN3-204ENST00000461018 CCDC84Q86UT8 332 aaPredicted RBP5.57□□□□□ -1.52
CNN3-204ENST00000461018 SMYD4Q8IYR2 804 aaPredicted RBP5.57□□□□□ -1.52
CNN3-204ENST00000461018 GPBAR1Q8TDU6 330 aa5.57□□□□□ -1.52
CNN3-204ENST00000461018 PNISRQ8TF01 805 aaKnown RBP5.57□□□□□ -1.52
CNN3-204ENST00000461018 COA7Q96BR5 231 aa5.57□□□□□ -1.52
CNN3-204ENST00000461018 CEP44Q9C0F1 390 aa5.57□□□□□ -1.52
CNN3-204ENST00000461018 PDLIM7Q9NR12 457 aa5.57□□□□□ -1.52
CNN3-204ENST00000461018 DISC1Q9NRI5 854 aa5.57□□□□□ -1.52
CNN3-204ENST00000461018 C1GALT1Q9NS00 363 aa5.57□□□□□ -1.52
CNN3-204ENST00000461018 KRT82Q9NSB4 513 aa5.57□□□□□ -1.52
CNN3-204ENST00000461018 SAMM50Q9Y512 469 aa5.57□□□□□ -1.52
CNN3-204ENST00000461018 BRWD1Q9NSI6 2320 aa5.56□□□□□ -1.52
CNN3-204ENST00000461018 EPG5Q9HCE0 2579 aa5.56□□□□□ -1.52
CNN3-204ENST00000461018 USP17L7P0C7H9 530 aa5.56□□□□□ -1.52
CNN3-204ENST00000461018 FAM87AP0C7U9 286 aa5.56□□□□□ -1.52
CNN3-204ENST00000461018 CYP27A1Q02318 531 aa5.56□□□□□ -1.52
CNN3-204ENST00000461018 CPSF6Q16630 551 aaKnown RBP eCLIP5.56□□□□□ -1.52
CNN3-204ENST00000461018 TRIM60Q495X7 471 aa5.56□□□□□ -1.52
CNN3-204ENST00000461018 CCDC152Q4G0S7 254 aa5.56□□□□□ -1.52
CNN3-204ENST00000461018 GADL1Q6ZQY3 521 aa5.56□□□□□ -1.52
CNN3-204ENST00000461018 C16orf59Q7L2K0 433 aa5.56□□□□□ -1.52
CNN3-204ENST00000461018 VSIG10LQ86VR7 867 aa5.56□□□□□ -1.52
CNN3-204ENST00000461018 TP53INP2Q8IXH6 220 aa5.56□□□□□ -1.52
CNN3-204ENST00000461018 PLBD2Q8NHP8 589 aa5.56□□□□□ -1.52
CNN3-204ENST00000461018 GATA6Q92908 595 aa5.56□□□□□ -1.52
CNN3-204ENST00000461018 SRCIN1Q9C0H9 1055 aa5.56□□□□□ -1.52
CNN3-204ENST00000461018 GSX1Q9H4S2 264 aaPredicted RBP5.56□□□□□ -1.52
CNN3-204ENST00000461018 C12orf49Q9H741 205 aa5.56□□□□□ -1.52
CNN3-204ENST00000461018 GREM2Q9H772 168 aa5.56□□□□□ -1.52
CNN3-204ENST00000461018 BABAM1Q9NWV8 329 aa5.56□□□□□ -1.52
CNN3-204ENST00000461018 CCDC39Q9UFE4 941 aa5.56□□□□□ -1.52
CNN3-204ENST00000461018 TTF2Q9UNY4 1162 aaKnown RBP5.56□□□□□ -1.52
CNN3-204ENST00000461018 DCHS1Q96JQ0 3298 aa5.56□□□□□ -1.52
CNN3-204ENST00000461018 CHD7Q9P2D1 2997 aa5.56□□□□□ -1.52
CNN3-204ENST00000461018 LRRC37A2A6NM11 1700 aa5.56□□□□□ -1.52
CNN3-204ENST00000461018 RLFQ13129 1914 aa5.56□□□□□ -1.52
CNN3-204ENST00000461018 MYBBP1AQ9BQG0 1328 aaKnown RBP5.55□□□□□ -1.52
CNN3-204ENST00000461018 ANKRD33BA6NCL7 494 aa5.55□□□□□ -1.52
CNN3-204ENST00000461018 DCDC2CA8MYV0 355 aa5.55□□□□□ -1.52
CNN3-204ENST00000461018 GIPC1O14908 333 aa5.55□□□□□ -1.52
CNN3-204ENST00000461018 ERC2O15083 957 aa5.55□□□□□ -1.52
CNN3-204ENST00000461018 TAF5LO75529 589 aa5.55□□□□□ -1.52
CNN3-204ENST00000461018 PRNPP04156 253 aa5.55□□□□□ -1.52
CNN3-204ENST00000461018 CELA3AP09093 270 aa5.55□□□□□ -1.52
CNN3-204ENST00000461018 ITGB5P18084 799 aa5.55□□□□□ -1.52
CNN3-204ENST00000461018 MSMPQ1L6U9 139 aa5.55□□□□□ -1.52
CNN3-204ENST00000461018 TREML2Q5T2D2 321 aa5.55□□□□□ -1.52
CNN3-204ENST00000461018 GJC2Q5T442 439 aaPredicted RBP5.55□□□□□ -1.52
CNN3-204ENST00000461018 LCE4AQ5TA78 99 aa5.55□□□□□ -1.52
CNN3-204ENST00000461018 SLC39A5Q6ZMH5 540 aa5.55□□□□□ -1.52
CNN3-204ENST00000461018 PRSS33Q8NF86 280 aa5.55□□□□□ -1.52
CNN3-204ENST00000461018 PLEKHF1Q96S99 279 aa5.55□□□□□ -1.52
CNN3-204ENST00000461018 NKX2-4Q9H2Z4 354 aa5.55□□□□□ -1.52
CNN3-204ENST00000461018 FAM86C1Q9NVL1 165 aa5.55□□□□□ -1.52
CNN3-204ENST00000461018 CHPF2Q9P2E5 772 aa5.55□□□□□ -1.52
CNN3-204ENST00000461018 FAM8A1Q9UBU6 413 aa5.55□□□□□ -1.52
CNN3-204ENST00000461018 ZNF112Q9UJU3 913 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms