RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 F2P00734 622 aa16.9■□□□□ 0.3
NCK1-202ENST00000460960 CCT2P78371 535 aaKnown RBP16.9■□□□□ 0.3
NCK1-202ENST00000460960 FUT2Q10981 343 aa16.9■□□□□ 0.3
NCK1-202ENST00000460960 RTN1Q16799 776 aa16.9■□□□□ 0.3
NCK1-202ENST00000460960 ALYREFQ86V81 257 aaKnown RBP16.9■□□□□ 0.3
NCK1-202ENST00000460960 HOMER1Q86YM7 354 aa16.9■□□□□ 0.3
NCK1-202ENST00000460960 PPTC7Q8NI37 304 aa16.9■□□□□ 0.3
NCK1-202ENST00000460960 NID2Q14112 1375 aa16.89■□□□□ 0.3
NCK1-202ENST00000460960 MICAL3Q7RTP6 2002 aa16.89■□□□□ 0.29
NCK1-202ENST00000460960 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.89■□□□□ 0.29
NCK1-202ENST00000460960 H3BQ06 376 aaPredicted RBP16.89■□□□□ 0.29
NCK1-202ENST00000460960 NR3C2P08235 984 aa16.89■□□□□ 0.29
NCK1-202ENST00000460960 CALM1P0DP23 149 aa16.89■□□□□ 0.29
NCK1-202ENST00000460960 CALM2P0DP24 149 aa16.89■□□□□ 0.29
NCK1-202ENST00000460960 CALM3P0DP25 149 aa16.89■□□□□ 0.29
NCK1-202ENST00000460960 KIF5BP33176 963 aa16.89■□□□□ 0.29
NCK1-202ENST00000460960 STK3Q13188 491 aa16.89■□□□□ 0.29
NCK1-202ENST00000460960 MBTPS1Q14703 1052 aa16.89■□□□□ 0.29
NCK1-202ENST00000460960 PTPROQ16827 1216 aa16.89■□□□□ 0.29
NCK1-202ENST00000460960 TRIM71Q2Q1W2 868 aaKnown RBP16.89■□□□□ 0.29
NCK1-202ENST00000460960 SYNE3Q6ZMZ3 975 aa16.89■□□□□ 0.29
NCK1-202ENST00000460960 DBF4BQ8NFT6 615 aa16.89■□□□□ 0.29
NCK1-202ENST00000460960 SPATA33Q96N06 139 aa16.89■□□□□ 0.29
NCK1-202ENST00000460960 YME1L1Q96TA2 773 aa16.89■□□□□ 0.29
NCK1-202ENST00000460960 PXMP2Q9NR77 195 aa16.89■□□□□ 0.29
NCK1-202ENST00000460960 EMSYQ7Z589 1322 aa16.89■□□□□ 0.29
NCK1-202ENST00000460960 CNTNAP5Q8WYK1 1306 aa16.89■□□□□ 0.29
NCK1-202ENST00000460960 PRR33A8MZF0 331 aa16.88■□□□□ 0.29
NCK1-202ENST00000460960 RSPH10B2B2RC85 870 aa16.88■□□□□ 0.29
NCK1-202ENST00000460960 UPP2O95045 317 aa16.88■□□□□ 0.29
NCK1-202ENST00000460960 CD2BP2O95400 341 aaKnown RBP16.88■□□□□ 0.29
NCK1-202ENST00000460960 RSPH10BP0C881 870 aa16.88■□□□□ 0.29
NCK1-202ENST00000460960 METAP2P50579 478 aaKnown RBP eCLIP16.88■□□□□ 0.29
NCK1-202ENST00000460960 TRAF7Q6Q0C0 670 aa16.88■□□□□ 0.29
NCK1-202ENST00000460960 EMID1Q96A84 441 aaPredicted RBP16.88■□□□□ 0.29
NCK1-202ENST00000460960 MRPL38Q96DV4 380 aaKnown RBP16.88■□□□□ 0.29
NCK1-202ENST00000460960 SPZ1Q9BXG8 430 aa16.88■□□□□ 0.29
NCK1-202ENST00000460960 HAS3O00219 553 aa16.87■□□□□ 0.29
NCK1-202ENST00000460960 GGPS1O95749 300 aa16.87■□□□□ 0.29
NCK1-202ENST00000460960 CTSHP09668 335 aa16.87■□□□□ 0.29
NCK1-202ENST00000460960 ALADP13716 330 aa16.87■□□□□ 0.29
NCK1-202ENST00000460960 ST3GAL1Q11201 340 aa16.87■□□□□ 0.29
NCK1-202ENST00000460960 EPC2Q52LR7 807 aa16.87■□□□□ 0.29
NCK1-202ENST00000460960 TIGD5Q53EQ6 642 aa16.87■□□□□ 0.29
NCK1-202ENST00000460960 UPF2Q9HAU5 1272 aaKnown RBP16.87■□□□□ 0.29
NCK1-202ENST00000460960 C17orf102A2RUQ5 167 aa16.86■□□□□ 0.29
NCK1-202ENST00000460960 GRXCR2A6NFK2 248 aa16.86■□□□□ 0.29
NCK1-202ENST00000460960 OPLAHO14841 1288 aa16.86■□□□□ 0.29
NCK1-202ENST00000460960 ZBTB5O15062 677 aa16.86■□□□□ 0.29
NCK1-202ENST00000460960 RCAN1P53805 252 aa16.86■□□□□ 0.29
NCK1-202ENST00000460960 GPM6BQ13491 265 aa16.86■□□□□ 0.29
NCK1-202ENST00000460960 HIC1Q14526 733 aa16.86■□□□□ 0.29
NCK1-202ENST00000460960 NTRK3Q16288 839 aa16.86■□□□□ 0.29
NCK1-202ENST00000460960 ME3Q16798 604 aa16.86■□□□□ 0.29
NCK1-202ENST00000460960 HSDL1Q3SXM5 330 aa16.86■□□□□ 0.29
NCK1-202ENST00000460960 NECAB1Q8N987 351 aa16.86■□□□□ 0.29
NCK1-202ENST00000460960 BANK1Q8NDB2 785 aa16.86■□□□□ 0.29
NCK1-202ENST00000460960 ATP6V0A1Q93050 837 aa16.86■□□□□ 0.29
NCK1-202ENST00000460960 ZFP91Q96JP5 570 aaPredicted RBP16.86■□□□□ 0.29
NCK1-202ENST00000460960 MAF1Q9H063 256 aa16.86■□□□□ 0.29
NCK1-202ENST00000460960 PPFIA4O75335 1185 aa16.85■□□□□ 0.29
NCK1-202ENST00000460960 HOXA13P31271 388 aaPredicted RBP16.85■□□□□ 0.29
NCK1-202ENST00000460960 GNAQP50148 359 aa16.85■□□□□ 0.29
NCK1-202ENST00000460960 SCRN1Q12765 414 aa16.85■□□□□ 0.29
NCK1-202ENST00000460960 PUS10Q3MIT2 529 aaKnown RBP16.85■□□□□ 0.29
NCK1-202ENST00000460960 TCEAL5Q5H9L2 206 aa16.85■□□□□ 0.29
NCK1-202ENST00000460960 CELF3Q5SZQ8 465 aaKnown RBP16.85■□□□□ 0.29
NCK1-202ENST00000460960 MYSM1Q5VVJ2 828 aa16.85■□□□□ 0.29
NCK1-202ENST00000460960 SERINC5Q86VE9 423 aa16.85■□□□□ 0.29
NCK1-202ENST00000460960 SEPT8Q92599 483 aa16.85■□□□□ 0.29
NCK1-202ENST00000460960 PHKBQ93100 1093 aa16.85■□□□□ 0.29
NCK1-202ENST00000460960 ZNF274Q96GC6 653 aaPredicted RBP16.85■□□□□ 0.29
NCK1-202ENST00000460960 SAMD11Q96NU1 681 aa16.85■□□□□ 0.29
NCK1-202ENST00000460960 AMNQ9BXJ7 453 aa16.85■□□□□ 0.29
NCK1-202ENST00000460960 MLXIPQ9HAP2 919 aa16.85■□□□□ 0.29
NCK1-202ENST00000460960 RBM28Q9NW13 759 aaKnown RBP16.85■□□□□ 0.29
NCK1-202ENST00000460960 NLRC5Q86WI3 1866 aa16.84■□□□□ 0.29
NCK1-202ENST00000460960 PNMA6FA0A0J9YX94 578 aa16.84■□□□□ 0.29
NCK1-202ENST00000460960 DCXO43602 365 aa16.84■□□□□ 0.29
NCK1-202ENST00000460960 CSPG5O95196 566 aa16.84■□□□□ 0.29
NCK1-202ENST00000460960 UBA1P22314 1058 aaKnown RBP16.84■□□□□ 0.29
NCK1-202ENST00000460960 HTRA4P83105 476 aaPredicted RBP16.84■□□□□ 0.29
NCK1-202ENST00000460960 RABEP1Q15276 862 aa16.84■□□□□ 0.29
NCK1-202ENST00000460960 PLEKHG4Q58EX7 1191 aa16.84■□□□□ 0.29
NCK1-202ENST00000460960 KCNV1Q6PIU1 500 aa16.84■□□□□ 0.29
NCK1-202ENST00000460960 TMEM192Q8IY95 271 aa16.84■□□□□ 0.29
NCK1-202ENST00000460960 LZTS2Q9BRK4 669 aa16.84■□□□□ 0.29
NCK1-202ENST00000460960 PDCD2LQ9BRP1 358 aa16.84■□□□□ 0.29
NCK1-202ENST00000460960 CLDND1Q9NY35 253 aa16.84■□□□□ 0.29
NCK1-202ENST00000460960 FAM50BQ9Y247 325 aa16.84■□□□□ 0.29
NCK1-202ENST00000460960 NOP56O00567 594 aaKnown RBP16.83■□□□□ 0.28
NCK1-202ENST00000460960 PFKFB2O60825 505 aa16.83■□□□□ 0.28
NCK1-202ENST00000460960 CTDNEP1O95476 244 aa16.83■□□□□ 0.28
NCK1-202ENST00000460960 SMIM10L2AP0DMW4 78 aa16.83■□□□□ 0.28
NCK1-202ENST00000460960 SMIM10L2BP0DMW5 78 aa16.83■□□□□ 0.28
NCK1-202ENST00000460960 SMARCA1P28370 1054 aa16.83■□□□□ 0.28
NCK1-202ENST00000460960 HSD17B4P51659 736 aa16.83■□□□□ 0.28
NCK1-202ENST00000460960 TYW1BQ6NUM6 668 aa16.83■□□□□ 0.28
NCK1-202ENST00000460960 FCHSD1Q86WN1 690 aa16.83■□□□□ 0.28
NCK1-202ENST00000460960 POTEDQ86YR6 584 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms