RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 NR1I3Q14994 352 aa3.88□□□□□ -1.79
HPS3-203ENST00000460822 ABCB5Q2M3G0 1257 aa3.88□□□□□ -1.79
HPS3-203ENST00000460822 RTP2Q5QGT7 225 aa3.88□□□□□ -1.79
HPS3-203ENST00000460822 TCERG1LQ5VWI1 586 aa3.88□□□□□ -1.79
HPS3-203ENST00000460822 AMIGO3Q86WK7 504 aa3.88□□□□□ -1.79
HPS3-203ENST00000460822 SMC1BQ8NDV3 1235 aa3.88□□□□□ -1.79
HPS3-203ENST00000460822 TTC8Q8TAM2 541 aa3.88□□□□□ -1.79
HPS3-203ENST00000460822 ZNF526Q8TF50 670 aaPredicted RBP3.88□□□□□ -1.79
HPS3-203ENST00000460822 FRS2Q8WU20 508 aa3.88□□□□□ -1.79
HPS3-203ENST00000460822 SIGLEC10Q96LC7 697 aa3.88□□□□□ -1.79
HPS3-203ENST00000460822 GPR101Q96P66 508 aaPredicted RBP3.88□□□□□ -1.79
HPS3-203ENST00000460822 JMJD8Q96S16 334 aa3.88□□□□□ -1.79
HPS3-203ENST00000460822 ORAI3Q9BRQ5 295 aa3.88□□□□□ -1.79
HPS3-203ENST00000460822 BACE2Q9Y5Z0 518 aa3.88□□□□□ -1.79
HPS3-203ENST00000460822 E2F8A0AVK6 867 aa3.87□□□□□ -1.79
HPS3-203ENST00000460822 ARVCFO00192 962 aa3.87□□□□□ -1.79
HPS3-203ENST00000460822 CBX4O00257 560 aa3.87□□□□□ -1.79
HPS3-203ENST00000460822 PLIN1O60240 522 aa3.87□□□□□ -1.79
HPS3-203ENST00000460822 GAS7O60861 476 aa3.87□□□□□ -1.79
HPS3-203ENST00000460822 FKBP9O95302 570 aa3.87□□□□□ -1.79
HPS3-203ENST00000460822 YBX1P67809 324 aaKnown RBP3.87□□□□□ -1.79
HPS3-203ENST00000460822 RBM10P98175 930 aaKnown RBP3.87□□□□□ -1.79
HPS3-203ENST00000460822 UBE4AQ14139 1066 aa3.87□□□□□ -1.79
HPS3-203ENST00000460822 PTPN21Q16825 1174 aa3.87□□□□□ -1.79
HPS3-203ENST00000460822 FKBP9P1Q75LS8 142 aa3.87□□□□□ -1.79
HPS3-203ENST00000460822 TMC6Q7Z403 805 aa3.87□□□□□ -1.79
HPS3-203ENST00000460822 CCDC103Q8IW40 242 aa3.87□□□□□ -1.79
HPS3-203ENST00000460822 NPLOC4Q8TAT6 608 aa3.87□□□□□ -1.79
HPS3-203ENST00000460822 PTCHD1Q96NR3 888 aa3.87□□□□□ -1.79
HPS3-203ENST00000460822 RHOBTB2Q9BYZ6 727 aa3.87□□□□□ -1.79
HPS3-203ENST00000460822 TMEFF2Q9UIK5 374 aaPredicted RBP3.87□□□□□ -1.79
HPS3-203ENST00000460822 MBD1Q9UIS9 605 aaPredicted RBP3.87□□□□□ -1.79
HPS3-203ENST00000460822 DBR1Q9UK59 544 aaKnown RBP3.87□□□□□ -1.79
HPS3-203ENST00000460822 C2orf71A6NGG8 1288 aa3.87□□□□□ -1.79
HPS3-203ENST00000460822 AURKAO14965 403 aa3.87□□□□□ -1.79
HPS3-203ENST00000460822 FGF10O15520 208 aaPredicted RBP3.87□□□□□ -1.79
HPS3-203ENST00000460822 MEFVO15553 781 aaPredicted RBP3.87□□□□□ -1.79
HPS3-203ENST00000460822 MSCO60682 206 aa3.87□□□□□ -1.79
HPS3-203ENST00000460822 FBXO21O94952 628 aa3.87□□□□□ -1.79
HPS3-203ENST00000460822 SRGAP2CP0DJJ0 459 aa3.87□□□□□ -1.79
HPS3-203ENST00000460822 ZSCAN20P17040 1043 aaPredicted RBP3.87□□□□□ -1.79
HPS3-203ENST00000460822 IARSP41252 1262 aaKnown RBP3.87□□□□□ -1.79
HPS3-203ENST00000460822 SEPHS1P49903 392 aa3.87□□□□□ -1.79
HPS3-203ENST00000460822 GPR85P60893 370 aa3.87□□□□□ -1.79
HPS3-203ENST00000460822 KIR3DS1Q14943 382 aa3.87□□□□□ -1.79
HPS3-203ENST00000460822 MLC1Q15049 377 aa3.87□□□□□ -1.79
HPS3-203ENST00000460822 ATP13A4Q4VNC1 1196 aa3.87□□□□□ -1.79
HPS3-203ENST00000460822 ACBD5Q5T8D3 534 aaPredicted RBP3.87□□□□□ -1.79
HPS3-203ENST00000460822 FAM102BQ5T8I3 360 aa3.87□□□□□ -1.79
HPS3-203ENST00000460822 BICRALQ6AI39 1079 aa3.87□□□□□ -1.79
HPS3-203ENST00000460822 RSPO2Q6UXX9 243 aaPredicted RBP3.87□□□□□ -1.79
HPS3-203ENST00000460822 KIF18BQ86Y91 864 aa3.87□□□□□ -1.79
HPS3-203ENST00000460822 TCEAL8Q8IYN2 117 aa3.87□□□□□ -1.79
HPS3-203ENST00000460822 IFNL3Q8IZI9 196 aa3.87□□□□□ -1.79
HPS3-203ENST00000460822 TMEM52Q8NDY8 209 aa3.87□□□□□ -1.79
HPS3-203ENST00000460822 FCRL3Q96P31 734 aaPredicted RBP3.87□□□□□ -1.79
HPS3-203ENST00000460822 ZFYVE21Q9BQ24 234 aa3.87□□□□□ -1.79
HPS3-203ENST00000460822 PCGF6Q9BYE7 350 aa3.87□□□□□ -1.79
HPS3-203ENST00000460822 ARNT2Q9HBZ2 717 aa3.87□□□□□ -1.79
HPS3-203ENST00000460822 GCM1Q9NP62 436 aa3.87□□□□□ -1.79
HPS3-203ENST00000460822 CABP5Q9NP86 173 aa3.87□□□□□ -1.79
HPS3-203ENST00000460822 EMC7Q9NPA0 242 aa3.87□□□□□ -1.79
HPS3-203ENST00000460822 GPR27Q9NS67 375 aa3.87□□□□□ -1.79
HPS3-203ENST00000460822 THG1LQ9NWX6 298 aaKnown RBP3.87□□□□□ -1.79
HPS3-203ENST00000460822 KLHL14Q9P2G3 628 aa3.87□□□□□ -1.79
HPS3-203ENST00000460822 IP6K2Q9UHH9 426 aa3.87□□□□□ -1.79
HPS3-203ENST00000460822 JAG2Q9Y219 1238 aa3.87□□□□□ -1.79
HPS3-203ENST00000460822 ZKSCAN5Q9Y2L8 839 aa3.87□□□□□ -1.79
HPS3-203ENST00000460822 NPFFR2Q9Y5X5 522 aa3.87□□□□□ -1.79
HPS3-203ENST00000460822 ARNTLO00327 626 aa3.86□□□□□ -1.79
HPS3-203ENST00000460822 TRAF5O00463 557 aa3.86□□□□□ -1.79
HPS3-203ENST00000460822 N4BP3O15049 544 aa3.86□□□□□ -1.79
HPS3-203ENST00000460822 ABLIM3O94929 683 aa3.86□□□□□ -1.79
HPS3-203ENST00000460822 EFEMP2O95967 443 aa3.86□□□□□ -1.79
HPS3-203ENST00000460822 MYL1P05976 194 aa3.86□□□□□ -1.79
HPS3-203ENST00000460822 MYBL2P10244 700 aa3.86□□□□□ -1.79
HPS3-203ENST00000460822 LCP1P13796 627 aa3.86□□□□□ -1.79
HPS3-203ENST00000460822 PLS3P13797 630 aa3.86□□□□□ -1.79
HPS3-203ENST00000460822 LTBRP36941 435 aa3.86□□□□□ -1.79
HPS3-203ENST00000460822 NXNQ6DKJ4 435 aa3.86□□□□□ -1.79
HPS3-203ENST00000460822 ZC3H14Q6PJT7 736 aaKnown RBP3.86□□□□□ -1.79
HPS3-203ENST00000460822 SLC4A10Q6U841 1118 aa3.86□□□□□ -1.79
HPS3-203ENST00000460822 HDGFL2Q7Z4V5 671 aaPredicted RBP3.86□□□□□ -1.79
HPS3-203ENST00000460822 CABP7Q86V35 215 aa3.86□□□□□ -1.79
HPS3-203ENST00000460822 SMC5Q8IY18 1101 aa3.86□□□□□ -1.79
HPS3-203ENST00000460822 MAGEB6Q8N7X4 407 aa3.86□□□□□ -1.79
HPS3-203ENST00000460822 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.86□□□□□ -1.79
HPS3-203ENST00000460822 MZB1Q8WU39 189 aa3.86□□□□□ -1.79
HPS3-203ENST00000460822 JPH3Q8WXH2 748 aaPredicted RBP3.86□□□□□ -1.79
HPS3-203ENST00000460822 MPHOSPH6Q99547 160 aaKnown RBP3.86□□□□□ -1.79
HPS3-203ENST00000460822 ALG1Q9BT22 464 aa3.86□□□□□ -1.79
HPS3-203ENST00000460822 CELF4Q9BZC1 486 aaKnown RBP3.86□□□□□ -1.79
HPS3-203ENST00000460822 CNTD2Q9H8S5 307 aa3.86□□□□□ -1.79
HPS3-203ENST00000460822 VTA1Q9NP79 307 aa3.86□□□□□ -1.79
HPS3-203ENST00000460822 SPTLC3Q9NUV7 552 aa3.86□□□□□ -1.79
HPS3-203ENST00000460822 CLEC1BQ9P126 229 aa3.86□□□□□ -1.79
HPS3-203ENST00000460822 LUC7L2Q9Y383 392 aaKnown RBP3.86□□□□□ -1.79
HPS3-203ENST00000460822 SPEF1Q9Y4P9 236 aa3.86□□□□□ -1.79
HPS3-203ENST00000460822 GOLGA6CA6NDK9 693 aa3.85□□□□□ -1.79
HPS3-203ENST00000460822 GOLGA6BA6NDN3 693 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms