RNA–Protein interactions for RNA: ENST00000460657.1

CPNE6-202, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 4,540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-202ENST00000460657 EARS2Q5JPH6 523 aaKnown RBP13.15□□□□□ -0.3
CPNE6-202ENST00000460657 RC3H1Q5TC82 1133 aaKnown RBP13.15□□□□□ -0.3
CPNE6-202ENST00000460657 POTEBQ6S5H4 581 aa13.15□□□□□ -0.3
CPNE6-202ENST00000460657 ADGRF4Q8IZF3 695 aa13.15□□□□□ -0.3
CPNE6-202ENST00000460657 DCAF4Q8WV16 495 aa13.15□□□□□ -0.3
CPNE6-202ENST00000460657 PARVGQ9HBI0 331 aa13.15□□□□□ -0.3
CPNE6-202ENST00000460657 FEZ2Q9UHY8 353 aaPredicted RBP13.15□□□□□ -0.3
CPNE6-202ENST00000460657 A0A1W2PQJ5 194 aa13.15□□□□□ -0.3
CPNE6-202ENST00000460657 NCK2O43639 380 aa13.15□□□□□ -0.3
CPNE6-202ENST00000460657 GDF11O95390 407 aa13.15□□□□□ -0.3
CPNE6-202ENST00000460657 GAS8O95995 478 aa13.15□□□□□ -0.3
CPNE6-202ENST00000460657 RSRC2Q7L4I2 434 aaKnown RBP13.15□□□□□ -0.3
CPNE6-202ENST00000460657 LINC00116Q8NCU8 138 aa13.15□□□□□ -0.3
CPNE6-202ENST00000460657 BCL9O00512 1426 aa13.15□□□□□ -0.3
CPNE6-202ENST00000460657 GBP1P32455 592 aa13.15□□□□□ -0.3
CPNE6-202ENST00000460657 CUL1Q13616 776 aa13.15□□□□□ -0.3
CPNE6-202ENST00000460657 ERGIC2Q96RQ1 377 aa13.15□□□□□ -0.3
CPNE6-202ENST00000460657 MAD2L2Q9UI95 211 aa13.15□□□□□ -0.3
CPNE6-202ENST00000460657 RGPD1P0DJD0 1748 aa13.15□□□□□ -0.31
CPNE6-202ENST00000460657 FLT1P17948 1338 aa13.14□□□□□ -0.31
CPNE6-202ENST00000460657 MYMKA6NI61 221 aa13.14□□□□□ -0.31
CPNE6-202ENST00000460657 CCDC188H7C350 402 aa13.14□□□□□ -0.31
CPNE6-202ENST00000460657 PPIP5K2O43314 1243 aa13.14□□□□□ -0.31
CPNE6-202ENST00000460657 AKR1B1P15121 316 aa13.14□□□□□ -0.31
CPNE6-202ENST00000460657 BMP6P22004 513 aa13.14□□□□□ -0.31
CPNE6-202ENST00000460657 KLRK1P26718 216 aa13.14□□□□□ -0.31
CPNE6-202ENST00000460657 SMARCA1P28370 1054 aa13.14□□□□□ -0.31
CPNE6-202ENST00000460657 C16orf86Q6ZW13 317 aa13.14□□□□□ -0.31
CPNE6-202ENST00000460657 RUBCNQ92622 972 aa13.14□□□□□ -0.31
CPNE6-202ENST00000460657 DNAJC7Q99615 494 aa13.14□□□□□ -0.31
CPNE6-202ENST00000460657 PLCD4Q9BRC7 762 aa13.14□□□□□ -0.31
CPNE6-202ENST00000460657 MTMR4Q9NYA4 1195 aa13.14□□□□□ -0.31
CPNE6-202ENST00000460657 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.14□□□□□ -0.31
CPNE6-202ENST00000460657 SSU72P8A0A1W2PR75 194 aa13.14□□□□□ -0.31
CPNE6-202ENST00000460657 ZNF185O15231 689 aa13.14□□□□□ -0.31
CPNE6-202ENST00000460657 NR1D1P20393 614 aa13.14□□□□□ -0.31
CPNE6-202ENST00000460657 GKAP1Q5VSY0 366 aaPredicted RBP13.14□□□□□ -0.31
CPNE6-202ENST00000460657 NSMFQ6X4W1 530 aa13.14□□□□□ -0.31
CPNE6-202ENST00000460657 SMIM5Q71RC9 77 aa13.14□□□□□ -0.31
CPNE6-202ENST00000460657 SFR1Q86XK3 245 aa13.14□□□□□ -0.31
CPNE6-202ENST00000460657 MSANTD4Q8NCY6 345 aa13.14□□□□□ -0.31
CPNE6-202ENST00000460657 DBNDD1Q9H9R9 158 aa13.14□□□□□ -0.31
CPNE6-202ENST00000460657 DAAM1Q9Y4D1 1078 aa13.14□□□□□ -0.31
CPNE6-202ENST00000460657 CALRP27797 417 aaKnown RBP13.14□□□□□ -0.31
CPNE6-202ENST00000460657 NFIXQ14938 502 aa13.14□□□□□ -0.31
CPNE6-202ENST00000460657 PPM1KQ8N3J5 372 aa13.14□□□□□ -0.31
CPNE6-202ENST00000460657 CSRNP1Q96S65 589 aa13.14□□□□□ -0.31
CPNE6-202ENST00000460657 ZNF577Q9BSK1 485 aa13.14□□□□□ -0.31
CPNE6-202ENST00000460657 HOMER2Q9NSB8 354 aa13.14□□□□□ -0.31
CPNE6-202ENST00000460657 KBTBD4Q9NVX7 518 aa13.14□□□□□ -0.31
CPNE6-202ENST00000460657 PSD3Q9NYI0 1048 aa13.14□□□□□ -0.31
CPNE6-202ENST00000460657 RGPD8O14715 1765 aaPredicted RBP13.14□□□□□ -0.31
CPNE6-202ENST00000460657 ATRNO75882 1429 aa13.14□□□□□ -0.31
CPNE6-202ENST00000460657 NALCNQ8IZF0 1738 aa13.14□□□□□ -0.31
CPNE6-202ENST00000460657 A0A087X0B3 334 aa13.14□□□□□ -0.31
CPNE6-202ENST00000460657 ADRA2BP18089 450 aa13.14□□□□□ -0.31
CPNE6-202ENST00000460657 WDR78Q5VTH9 848 aa13.14□□□□□ -0.31
CPNE6-202ENST00000460657 TMEM179Q6ZVK1 233 aa13.14□□□□□ -0.31
CPNE6-202ENST00000460657 LARGE2Q8N3Y3 721 aa13.14□□□□□ -0.31
CPNE6-202ENST00000460657 GRID2IPA4D2P6 1211 aa13.13□□□□□ -0.31
CPNE6-202ENST00000460657 HMGB1P1B2RPK0 211 aaPredicted RBP13.13□□□□□ -0.31
CPNE6-202ENST00000460657 PPP4CP60510 307 aa13.13□□□□□ -0.31
CPNE6-202ENST00000460657 ARHGAP4P98171 946 aa13.13□□□□□ -0.31
CPNE6-202ENST00000460657 STRN3Q13033 797 aa13.13□□□□□ -0.31
CPNE6-202ENST00000460657 BEND6Q5SZJ8 279 aaPredicted RBP13.13□□□□□ -0.31
CPNE6-202ENST00000460657 FAM20AQ96MK3 541 aa13.13□□□□□ -0.31
CPNE6-202ENST00000460657 PNKPQ96T60 521 aa13.13□□□□□ -0.31
CPNE6-202ENST00000460657 DNAI2Q9GZS0 605 aa13.13□□□□□ -0.31
CPNE6-202ENST00000460657 ESYT2A0FGR8 921 aa13.13□□□□□ -0.31
CPNE6-202ENST00000460657 KNOP1Q1ED39 458 aaKnown RBP13.13□□□□□ -0.31
CPNE6-202ENST00000460657 SH3RF1Q7Z6J0 888 aa13.13□□□□□ -0.31
CPNE6-202ENST00000460657 JDP2Q8WYK2 163 aa13.13□□□□□ -0.31
CPNE6-202ENST00000460657 FAM212AQ96EL1 285 aa13.13□□□□□ -0.31
CPNE6-202ENST00000460657 MPHOSPH6Q99547 160 aaKnown RBP13.13□□□□□ -0.31
CPNE6-202ENST00000460657 PALM3A6NDB9 673 aaPredicted RBP13.13□□□□□ -0.31
CPNE6-202ENST00000460657 TCP10L2B9ZVM9 353 aa13.13□□□□□ -0.31
CPNE6-202ENST00000460657 ZBED4O75132 1171 aa13.13□□□□□ -0.31
CPNE6-202ENST00000460657 NR3C1P04150 777 aa13.13□□□□□ -0.31
CPNE6-202ENST00000460657 USP11P51784 963 aa13.13□□□□□ -0.31
CPNE6-202ENST00000460657 SETDB1Q15047 1291 aa13.13□□□□□ -0.31
CPNE6-202ENST00000460657 QRICH1Q2TAL8 776 aa13.13□□□□□ -0.31
CPNE6-202ENST00000460657 SLC10A5Q5PT55 438 aa13.13□□□□□ -0.31
CPNE6-202ENST00000460657 TTI2Q6NXR4 508 aa13.13□□□□□ -0.31
CPNE6-202ENST00000460657 CCNI2Q6ZMN8 369 aaPredicted RBP13.13□□□□□ -0.31
CPNE6-202ENST00000460657 AP1M1Q9BXS5 423 aa13.13□□□□□ -0.31
CPNE6-202ENST00000460657 INTS13Q9NVM9 706 aa13.13□□□□□ -0.31
CPNE6-202ENST00000460657 UBXN2AP68543 259 aa13.12□□□□□ -0.31
CPNE6-202ENST00000460657 DHX9Q08211 1270 aaKnown RBP13.12□□□□□ -0.31
CPNE6-202ENST00000460657 FAM102BQ5T8I3 360 aa13.12□□□□□ -0.31
CPNE6-202ENST00000460657 CC2D2BQ6DHV5 1058 aa13.12□□□□□ -0.31
CPNE6-202ENST00000460657 MAGOHBQ96A72 148 aaKnown RBP13.12□□□□□ -0.31
CPNE6-202ENST00000460657 LRRC1Q9BTT6 524 aa13.12□□□□□ -0.31
CPNE6-202ENST00000460657 HOMER3Q9NSC5 361 aa13.12□□□□□ -0.31
CPNE6-202ENST00000460657 POTEFA5A3E0 1075 aa13.12□□□□□ -0.31
CPNE6-202ENST00000460657 LRRN2O75325 713 aa13.12□□□□□ -0.31
CPNE6-202ENST00000460657 POTEIP0CG38 1075 aa13.12□□□□□ -0.31
CPNE6-202ENST00000460657 KLK7P49862 253 aa13.12□□□□□ -0.31
CPNE6-202ENST00000460657 PDE6CP51160 858 aa13.12□□□□□ -0.31
CPNE6-202ENST00000460657 STAT2P52630 851 aa13.12□□□□□ -0.31
CPNE6-202ENST00000460657 ZNF543Q08ER8 600 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms