RNA–Protein interactions for RNA: ENST00000460620.5

PTPN22-203, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 1,794 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-203ENST00000460620 TRMT10BQ6PF06 316 aaKnown RBP3.34□□□□□ -1.87
PTPN22-203ENST00000460620 LIMS2Q7Z4I7 341 aa3.34□□□□□ -1.87
PTPN22-203ENST00000460620 CIR1Q86X95 450 aaPredicted RBP3.34□□□□□ -1.87
PTPN22-203ENST00000460620 KBTBD2Q8IY47 623 aa3.34□□□□□ -1.87
PTPN22-203ENST00000460620 DCAF4Q8WV16 495 aa3.34□□□□□ -1.87
PTPN22-203ENST00000460620 DLX3O60479 287 aa3.33□□□□□ -1.88
PTPN22-203ENST00000460620 FGFR1P11362 822 aa3.33□□□□□ -1.88
PTPN22-203ENST00000460620 GRIA2P42262 883 aa3.33□□□□□ -1.88
PTPN22-203ENST00000460620 DDR2Q16832 855 aa3.33□□□□□ -1.88
PTPN22-203ENST00000460620 KIZQ2M2Z5 673 aa3.33□□□□□ -1.88
PTPN22-203ENST00000460620 SLFN13Q68D06 897 aa3.33□□□□□ -1.88
PTPN22-203ENST00000460620 TMC5Q6UXY8 1006 aa3.33□□□□□ -1.88
PTPN22-203ENST00000460620 DPH6Q7L8W6 267 aa3.33□□□□□ -1.88
PTPN22-203ENST00000460620 OTOP3Q7RTS5 596 aa3.33□□□□□ -1.88
PTPN22-203ENST00000460620 MCF2L2Q86YR7 1114 aa3.33□□□□□ -1.88
PTPN22-203ENST00000460620 DTX3Q8N9I9 347 aa3.33□□□□□ -1.88
PTPN22-203ENST00000460620 SLC43A3Q8NBI5 491 aa3.33□□□□□ -1.88
PTPN22-203ENST00000460620 DNERQ8NFT8 737 aa3.33□□□□□ -1.88
PTPN22-203ENST00000460620 UHMK1Q8TAS1 419 aaKnown RBP3.33□□□□□ -1.88
PTPN22-203ENST00000460620 PIP4K2CQ8TBX8 421 aa3.33□□□□□ -1.88
PTPN22-203ENST00000460620 TINF2Q9BSI4 451 aa3.33□□□□□ -1.88
PTPN22-203ENST00000460620 AARSD1Q9BTE6 412 aaKnown RBP3.33□□□□□ -1.88
PTPN22-203ENST00000460620 PHF20Q9BVI0 1012 aa3.33□□□□□ -1.88
PTPN22-203ENST00000460620 ST6GALNAC2Q9UJ37 374 aa3.33□□□□□ -1.88
PTPN22-203ENST00000460620 ADAM29Q9UKF5 820 aa3.33□□□□□ -1.88
PTPN22-203ENST00000460620 COL6A1P12109 1028 aa3.33□□□□□ -1.88
PTPN22-203ENST00000460620 FAHP16930 419 aa3.33□□□□□ -1.88
PTPN22-203ENST00000460620 GRK2P25098 689 aa3.33□□□□□ -1.88
PTPN22-203ENST00000460620 GRK3P35626 688 aa3.33□□□□□ -1.88
PTPN22-203ENST00000460620 SPIRE1Q08AE8 756 aa3.33□□□□□ -1.88
PTPN22-203ENST00000460620 SMAD2Q15796 467 aaKnown RBP3.33□□□□□ -1.88
PTPN22-203ENST00000460620 LBX2Q6XYB7 198 aa3.33□□□□□ -1.88
PTPN22-203ENST00000460620 USP53Q70EK8 1073 aa3.33□□□□□ -1.88
PTPN22-203ENST00000460620 PROSER1Q86XN7 944 aa3.33□□□□□ -1.88
PTPN22-203ENST00000460620 ST13P5Q8NFI4 369 aaPredicted RBP3.33□□□□□ -1.88
PTPN22-203ENST00000460620 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.33□□□□□ -1.88
PTPN22-203ENST00000460620 IGDCC4Q8TDY8 1250 aa3.33□□□□□ -1.88
PTPN22-203ENST00000460620 GMLQ99445 158 aa3.33□□□□□ -1.88
PTPN22-203ENST00000460620 JAM3Q9BX67 310 aa3.33□□□□□ -1.88
PTPN22-203ENST00000460620 SEMA4AQ9H3S1 761 aa3.33□□□□□ -1.88
PTPN22-203ENST00000460620 CD248Q9HCU0 757 aa3.33□□□□□ -1.88
PTPN22-203ENST00000460620 WASF3Q9UPY6 502 aa3.33□□□□□ -1.88
PTPN22-203ENST00000460620 SLC27A2O14975 620 aa3.32□□□□□ -1.88
PTPN22-203ENST00000460620 GPR42O15529 346 aa3.32□□□□□ -1.88
PTPN22-203ENST00000460620 MSCO60682 206 aa3.32□□□□□ -1.88
PTPN22-203ENST00000460620 GPR85P60893 370 aa3.32□□□□□ -1.88
PTPN22-203ENST00000460620 ICAM4Q14773 271 aa3.32□□□□□ -1.88
PTPN22-203ENST00000460620 PAN2Q504Q3 1202 aaKnown RBP3.32□□□□□ -1.88
PTPN22-203ENST00000460620 HABP4Q5JVS0 413 aaKnown RBP3.32□□□□□ -1.88
PTPN22-203ENST00000460620 STYK1Q6J9G0 422 aa3.32□□□□□ -1.88
PTPN22-203ENST00000460620 IFNL3Q8IZI9 196 aa3.32□□□□□ -1.88
PTPN22-203ENST00000460620 HNRNPLLQ8WVV9 542 aaKnown RBP3.32□□□□□ -1.88
PTPN22-203ENST00000460620 CLEC4DQ8WXI8 215 aa3.32□□□□□ -1.88
PTPN22-203ENST00000460620 ZNF669Q96BR6 464 aaPredicted RBP3.32□□□□□ -1.88
PTPN22-203ENST00000460620 KLC2Q9H0B6 622 aa3.32□□□□□ -1.88
PTPN22-203ENST00000460620 SEC61A2Q9H9S3 476 aa3.32□□□□□ -1.88
PTPN22-203ENST00000460620 JADE2Q9NQC1 790 aa3.32□□□□□ -1.88
PTPN22-203ENST00000460620 PATE3B3GLJ2 98 aa3.31□□□□□ -1.88
PTPN22-203ENST00000460620 PROB1E7EW31 1015 aa3.31□□□□□ -1.88
PTPN22-203ENST00000460620 KLF4O43474 513 aa3.31□□□□□ -1.88
PTPN22-203ENST00000460620 B4GALT4O60513 344 aa3.31□□□□□ -1.88
PTPN22-203ENST00000460620 KLHL18O94889 574 aa3.31□□□□□ -1.88
PTPN22-203ENST00000460620 FBXO21O94952 628 aa3.31□□□□□ -1.88
PTPN22-203ENST00000460620 ENO2P09104 434 aaPredicted RBP3.31□□□□□ -1.88
PTPN22-203ENST00000460620 GNAT1P11488 350 aa3.31□□□□□ -1.88
PTPN22-203ENST00000460620 SELENOPP49908 381 aa3.31□□□□□ -1.88
PTPN22-203ENST00000460620 EPHA5P54756 1037 aa3.31□□□□□ -1.88
PTPN22-203ENST00000460620 TUSC3Q13454 348 aa3.31□□□□□ -1.88
PTPN22-203ENST00000460620 CDSNQ15517 529 aa3.31□□□□□ -1.88
PTPN22-203ENST00000460620 NSMFQ6X4W1 530 aa3.31□□□□□ -1.88
PTPN22-203ENST00000460620 Q6ZUG5 572 aa3.31□□□□□ -1.88
PTPN22-203ENST00000460620 ANKS3Q6ZW76 656 aa3.31□□□□□ -1.88
PTPN22-203ENST00000460620 RALYLQ86SE5 291 aaKnown RBP3.31□□□□□ -1.88
PTPN22-203ENST00000460620 REXO1L1PQ8IX06 675 aa3.31□□□□□ -1.88
PTPN22-203ENST00000460620 LRRC47Q8N1G4 583 aaKnown RBP3.31□□□□□ -1.88
PTPN22-203ENST00000460620 CELF2-AS1Q8N7Q2 184 aa3.31□□□□□ -1.88
PTPN22-203ENST00000460620 SH3RF3Q8TEJ3 882 aaPredicted RBP3.31□□□□□ -1.88
PTPN22-203ENST00000460620 AJUBAQ96IF1 538 aa3.31□□□□□ -1.88
PTPN22-203ENST00000460620 DEF6Q9H4E7 631 aa3.31□□□□□ -1.88
PTPN22-203ENST00000460620 ST7Q9NRC1 585 aa3.31□□□□□ -1.88
PTPN22-203ENST00000460620 PPARGC1AQ9UBK2 798 aaKnown RBP3.31□□□□□ -1.88
PTPN22-203ENST00000460620 ZDHHC9Q9Y397 364 aa3.31□□□□□ -1.88
PTPN22-203ENST00000460620 TCAF1Q9Y4C2 921 aa3.31□□□□□ -1.88
PTPN22-203ENST00000460620 WDR33Q9C0J8 1336 aaKnown RBP3.31□□□□□ -1.88
PTPN22-203ENST00000460620 TRAV20A0A0B4J274 112 aa3.3□□□□□ -1.88
PTPN22-203ENST00000460620 FAM47E-STBD1D6RA91 191 aa3.3□□□□□ -1.88
PTPN22-203ENST00000460620 PRODHO43272 600 aa3.3□□□□□ -1.88
PTPN22-203ENST00000460620 KNG1P01042 644 aa3.3□□□□□ -1.88
PTPN22-203ENST00000460620 PABPC1P11940 636 aaKnown RBP3.3□□□□□ -1.88
PTPN22-203ENST00000460620 DNAJA1P31689 397 aaKnown RBP3.3□□□□□ -1.88
PTPN22-203ENST00000460620 GRIN1Q05586 938 aa3.3□□□□□ -1.88
PTPN22-203ENST00000460620 IFRD2Q12894 506 aaPredicted RBP3.3□□□□□ -1.88
PTPN22-203ENST00000460620 SKIDA1Q1XH10 827 aa3.3□□□□□ -1.88
PTPN22-203ENST00000460620 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.3□□□□□ -1.88
PTPN22-203ENST00000460620 IFNL2Q8IZJ0 200 aa3.3□□□□□ -1.88
PTPN22-203ENST00000460620 NUDT10Q8NFP7 164 aa3.3□□□□□ -1.88
PTPN22-203ENST00000460620 OSBP2Q969R2 916 aa3.3□□□□□ -1.88
PTPN22-203ENST00000460620 NUDT11Q96G61 164 aa3.3□□□□□ -1.88
PTPN22-203ENST00000460620 MEGF9Q9H1U4 602 aa3.3□□□□□ -1.88
PTPN22-203ENST00000460620 ARHGEF4Q9NR80 690 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms