RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 KCNMB3Q9NPA1 279 aa25.4■■□□□ 1.66
C9orf3-209ENST00000460573 ATP2B1P20020 1258 aa25.39■■□□□ 1.66
C9orf3-209ENST00000460573 KRT76Q01546 638 aa25.39■■□□□ 1.66
C9orf3-209ENST00000460573 SLFN12Q8IYM2 578 aa25.39■■□□□ 1.66
C9orf3-209ENST00000460573 VTI1AQ96AJ9 217 aa25.39■■□□□ 1.66
C9orf3-209ENST00000460573 MTG1Q9BT17 334 aaPredicted RBP25.39■■□□□ 1.66
C9orf3-209ENST00000460573 ZSCAN16Q9H4T2 348 aaPredicted RBP25.39■■□□□ 1.66
C9orf3-209ENST00000460573 TSHZ2Q9NRE2 1034 aa25.39■■□□□ 1.66
C9orf3-209ENST00000460573 MTMR6Q9Y217 621 aa25.39■■□□□ 1.66
C9orf3-209ENST00000460573 MARCH6O60337 910 aa25.38■■□□□ 1.65
C9orf3-209ENST00000460573 NEMFO60524 1076 aa25.38■■□□□ 1.65
C9orf3-209ENST00000460573 GAS7O60861 476 aa25.38■■□□□ 1.65
C9orf3-209ENST00000460573 ANP32AP39687 249 aaKnown RBP25.38■■□□□ 1.65
C9orf3-209ENST00000460573 LRCH2Q5VUJ6 765 aa25.38■■□□□ 1.65
C9orf3-209ENST00000460573 ZNF746Q6NUN9 644 aaPredicted RBP25.38■■□□□ 1.65
C9orf3-209ENST00000460573 CXCL17Q6UXB2 119 aa25.38■■□□□ 1.65
C9orf3-209ENST00000460573 LRCH3Q96II8 777 aa25.38■■□□□ 1.65
C9orf3-209ENST00000460573 TEKT3Q9BXF9 490 aa25.38■■□□□ 1.65
C9orf3-209ENST00000460573 STARD7Q9NQZ5 370 aa25.38■■□□□ 1.65
C9orf3-209ENST00000460573 PSMD10O75832 226 aa25.37■■□□□ 1.65
C9orf3-209ENST00000460573 MCM7P33993 719 aa25.37■■□□□ 1.65
C9orf3-209ENST00000460573 SP4Q02446 784 aa25.37■■□□□ 1.65
C9orf3-209ENST00000460573 C1orf53Q5VUE5 145 aa25.37■■□□□ 1.65
C9orf3-209ENST00000460573 POTEDQ86YR6 584 aa25.37■■□□□ 1.65
C9orf3-209ENST00000460573 SMAP1Q8IYB5 467 aaPredicted RBP25.37■■□□□ 1.65
C9orf3-209ENST00000460573 KATNAL1Q9BW62 490 aa25.37■■□□□ 1.65
C9orf3-209ENST00000460573 GSTTP1A0A1W2PQM5 241 aa25.36■■□□□ 1.65
C9orf3-209ENST00000460573 SOX1O00570 391 aaPredicted RBP25.36■■□□□ 1.65
C9orf3-209ENST00000460573 PQBP1O60828 265 aaKnown RBP25.36■■□□□ 1.65
C9orf3-209ENST00000460573 ATG7O95352 703 aa25.36■■□□□ 1.65
C9orf3-209ENST00000460573 TCF7P36402 384 aaPredicted RBP25.36■■□□□ 1.65
C9orf3-209ENST00000460573 TOB1P50616 345 aaPredicted RBP25.36■■□□□ 1.65
C9orf3-209ENST00000460573 ACTR2P61160 394 aa25.36■■□□□ 1.65
C9orf3-209ENST00000460573 CALCRLQ16602 461 aa25.36■■□□□ 1.65
C9orf3-209ENST00000460573 A0A0U1RQG5 324 aaPredicted RBP25.35■■□□□ 1.65
C9orf3-209ENST00000460573 DDX39AO00148 427 aaKnown RBP25.35■■□□□ 1.65
C9orf3-209ENST00000460573 WNT7AO00755 349 aa25.35■■□□□ 1.65
C9orf3-209ENST00000460573 LGALS2P05162 132 aa25.35■■□□□ 1.65
C9orf3-209ENST00000460573 SFNP31947 248 aa25.35■■□□□ 1.65
C9orf3-209ENST00000460573 ZNF174Q15697 407 aa25.35■■□□□ 1.65
C9orf3-209ENST00000460573 FERMT3Q86UX7 667 aa25.35■■□□□ 1.65
C9orf3-209ENST00000460573 RDM1Q8NG50 284 aa25.35■■□□□ 1.65
C9orf3-209ENST00000460573 HAS1Q92839 578 aa25.35■■□□□ 1.65
C9orf3-209ENST00000460573 DOCK5Q9H7D0 1870 aa25.34■■□□□ 1.65
C9orf3-209ENST00000460573 CCNE2O96020 404 aa25.34■■□□□ 1.65
C9orf3-209ENST00000460573 F2P00734 622 aa25.34■■□□□ 1.65
C9orf3-209ENST00000460573 TLE2Q04725 743 aa25.34■■□□□ 1.65
C9orf3-209ENST00000460573 RESTQ13127 1097 aa25.34■■□□□ 1.65
C9orf3-209ENST00000460573 SNX17Q15036 470 aa25.34■■□□□ 1.65
C9orf3-209ENST00000460573 MIS18BP1Q6P0N0 1132 aa25.34■■□□□ 1.65
C9orf3-209ENST00000460573 MTMR9Q96QG7 549 aa25.34■■□□□ 1.65
C9orf3-209ENST00000460573 UIMC1Q96RL1 719 aa25.34■■□□□ 1.65
C9orf3-209ENST00000460573 C16orf70Q9BSU1 422 aa25.34■■□□□ 1.65
C9orf3-209ENST00000460573 PCDHA10Q9Y5I2 948 aa25.34■■□□□ 1.65
C9orf3-209ENST00000460573 WDR64B1ANS9 1081 aa25.33■■□□□ 1.65
C9orf3-209ENST00000460573 LAD1O00515 517 aa25.33■■□□□ 1.65
C9orf3-209ENST00000460573 CLTBP09497 229 aa25.33■■□□□ 1.65
C9orf3-209ENST00000460573 JAK3P52333 1124 aa25.33■■□□□ 1.65
C9orf3-209ENST00000460573 ITGA7Q13683 1181 aa25.33■■□□□ 1.65
C9orf3-209ENST00000460573 LRIT3Q3SXY7 679 aa25.33■■□□□ 1.65
C9orf3-209ENST00000460573 B3GNT9Q6UX72 402 aa25.33■■□□□ 1.65
C9orf3-209ENST00000460573 ABHD15Q6UXT9 468 aa25.33■■□□□ 1.65
C9orf3-209ENST00000460573 KAT2BQ92831 832 aa25.33■■□□□ 1.65
C9orf3-209ENST00000460573 SMARCAD1Q9H4L7 1026 aa25.33■■□□□ 1.65
C9orf3-209ENST00000460573 AZI2Q9H6S1 392 aa25.33■■□□□ 1.65
C9orf3-209ENST00000460573 PDLIM7Q9NR12 457 aa25.33■■□□□ 1.65
C9orf3-209ENST00000460573 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.33■■□□□ 1.65
C9orf3-209ENST00000460573 DAXXQ9UER7 740 aaPredicted RBP25.33■■□□□ 1.65
C9orf3-209ENST00000460573 ZNF215Q9UL58 517 aaPredicted RBP25.33■■□□□ 1.65
C9orf3-209ENST00000460573 PCDHB6Q9Y5E3 794 aa25.33■■□□□ 1.65
C9orf3-209ENST00000460573 EMSYQ7Z589 1322 aa25.33■■□□□ 1.64
C9orf3-209ENST00000460573 IGKV6D-21A0A0A0MT36 114 aa25.32■■□□□ 1.64
C9orf3-209ENST00000460573 DCDC2CA8MYV0 355 aa25.32■■□□□ 1.64
C9orf3-209ENST00000460573 H3BRB1 525 aa25.32■■□□□ 1.64
C9orf3-209ENST00000460573 LGR5O75473 907 aa25.32■■□□□ 1.64
C9orf3-209ENST00000460573 PSAPP07602 524 aa25.32■■□□□ 1.64
C9orf3-209ENST00000460573 ZSCAN22P10073 491 aaPredicted RBP25.32■■□□□ 1.64
C9orf3-209ENST00000460573 PPP2R5CQ13362 524 aa25.32■■□□□ 1.64
C9orf3-209ENST00000460573 SLC43A3Q8NBI5 491 aa25.32■■□□□ 1.64
C9orf3-209ENST00000460573 GJA10Q969M2 543 aa25.32■■□□□ 1.64
C9orf3-209ENST00000460573 TUT1Q9H6E5 874 aaKnown RBP25.32■■□□□ 1.64
C9orf3-209ENST00000460573 PCDHA12Q9UN75 941 aa25.32■■□□□ 1.64
C9orf3-209ENST00000460573 TELO2Q9Y4R8 837 aa25.32■■□□□ 1.64
C9orf3-209ENST00000460573 LTBP2Q14767 1821 aa25.32■■□□□ 1.64
C9orf3-209ENST00000460573 MROH7Q68CQ1 1323 aa25.32■■□□□ 1.64
C9orf3-209ENST00000460573 ARVCFO00192 962 aa25.31■■□□□ 1.64
C9orf3-209ENST00000460573 HAS3O00219 553 aa25.31■■□□□ 1.64
C9orf3-209ENST00000460573 BMP15O95972 392 aa25.31■■□□□ 1.64
C9orf3-209ENST00000460573 OR52Z1P0C646 297 aa25.31■■□□□ 1.64
C9orf3-209ENST00000460573 SUPT20HL2P0C7V6 817 aa25.31■■□□□ 1.64
C9orf3-209ENST00000460573 ZNF286BP0CG31 522 aa25.31■■□□□ 1.64
C9orf3-209ENST00000460573 RAG1P15918 1043 aa25.31■■□□□ 1.64
C9orf3-209ENST00000460573 PSEN2P49810 448 aa25.31■■□□□ 1.64
C9orf3-209ENST00000460573 SLC26A2P50443 739 aa25.31■■□□□ 1.64
C9orf3-209ENST00000460573 PTPN11Q06124 597 aaPredicted RBP25.31■■□□□ 1.64
C9orf3-209ENST00000460573 UTP14CQ5TAP6 766 aaKnown RBP25.31■■□□□ 1.64
C9orf3-209ENST00000460573 FAM160B1Q5W0V3 765 aa25.31■■□□□ 1.64
C9orf3-209ENST00000460573 NFRKBQ6P4R8 1299 aa25.31■■□□□ 1.64
C9orf3-209ENST00000460573 PLPPR4Q7Z2D5 763 aa25.31■■□□□ 1.64
C9orf3-209ENST00000460573 BADQ92934 168 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms