RNA–Protein interactions for RNA: ENST00000460333.5

VPS13D-202, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 4,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-202ENST00000460333 SLC44A5Q8NCS7 719 aa6.76□□□□□ -1.33
VPS13D-202ENST00000460333 RAB3IL1Q8TBN0 382 aa6.76□□□□□ -1.33
VPS13D-202ENST00000460333 CHURC1Q8WUH1 139 aa6.76□□□□□ -1.33
VPS13D-202ENST00000460333 MAIP1Q8WWC4 291 aa6.76□□□□□ -1.33
VPS13D-202ENST00000460333 TCP11Q8WWU5 503 aa6.76□□□□□ -1.33
VPS13D-202ENST00000460333 NELFBQ8WX92 580 aa6.76□□□□□ -1.33
VPS13D-202ENST00000460333 GPKOWQ92917 476 aaPredicted RBP eCLIP6.76□□□□□ -1.33
VPS13D-202ENST00000460333 CEP95Q96GE4 821 aa6.76□□□□□ -1.33
VPS13D-202ENST00000460333 MAGEF1Q9HAY2 307 aa6.76□□□□□ -1.33
VPS13D-202ENST00000460333 GJB4Q9NTQ9 266 aa6.76□□□□□ -1.33
VPS13D-202ENST00000460333 CEP104O60308 925 aa6.76□□□□□ -1.33
VPS13D-202ENST00000460333 CCNT1O60563 726 aaKnown RBP6.76□□□□□ -1.33
VPS13D-202ENST00000460333 GOLGA8HP0CJ92 632 aa6.76□□□□□ -1.33
VPS13D-202ENST00000460333 FERP16591 822 aa6.76□□□□□ -1.33
VPS13D-202ENST00000460333 CDC42EP5Q6NZY7 148 aa6.76□□□□□ -1.33
VPS13D-202ENST00000460333 KLHL7Q8IXQ5 586 aa6.76□□□□□ -1.33
VPS13D-202ENST00000460333 TEX9Q8N6V9 391 aa6.76□□□□□ -1.33
VPS13D-202ENST00000460333 KLHL29Q96CT2 875 aa6.76□□□□□ -1.33
VPS13D-202ENST00000460333 AK8Q96MA6 479 aa6.76□□□□□ -1.33
VPS13D-202ENST00000460333 BARHL2Q9NY43 387 aa6.76□□□□□ -1.33
VPS13D-202ENST00000460333 PNMA2Q9UL42 364 aa6.76□□□□□ -1.33
VPS13D-202ENST00000460333 CNTNAP5Q8WYK1 1306 aa6.76□□□□□ -1.33
VPS13D-202ENST00000460333 PNMA6FA0A0J9YX94 578 aa6.75□□□□□ -1.33
VPS13D-202ENST00000460333 ANO9A1A5B4 782 aa6.75□□□□□ -1.33
VPS13D-202ENST00000460333 RASSF10A6NK89 507 aa6.75□□□□□ -1.33
VPS13D-202ENST00000460333 KCNJ18B7U540 433 aa6.75□□□□□ -1.33
VPS13D-202ENST00000460333 ATP5HO75947 161 aa6.75□□□□□ -1.33
VPS13D-202ENST00000460333 GUCY2FP51841 1108 aa6.75□□□□□ -1.33
VPS13D-202ENST00000460333 KCNJ12Q14500 433 aa6.75□□□□□ -1.33
VPS13D-202ENST00000460333 NAA30Q147X3 362 aaPredicted RBP6.75□□□□□ -1.33
VPS13D-202ENST00000460333 NYAP1Q6ZVC0 841 aa6.75□□□□□ -1.33
VPS13D-202ENST00000460333 CLIC6Q96NY7 704 aa6.75□□□□□ -1.33
VPS13D-202ENST00000460333 CSRNP1Q96S65 589 aa6.75□□□□□ -1.33
VPS13D-202ENST00000460333 EHD4Q9H223 541 aa6.75□□□□□ -1.33
VPS13D-202ENST00000460333 CUEDC2Q9H467 287 aa6.75□□□□□ -1.33
VPS13D-202ENST00000460333 PLEKHA4Q9H4M7 779 aa6.75□□□□□ -1.33
VPS13D-202ENST00000460333 L2HGDHQ9H9P8 463 aa6.75□□□□□ -1.33
VPS13D-202ENST00000460333 HERC5Q9UII4 1024 aaKnown RBP6.75□□□□□ -1.33
VPS13D-202ENST00000460333 PCDHB6Q9Y5E3 794 aa6.75□□□□□ -1.33
VPS13D-202ENST00000460333 GUCY1A2P33402 732 aa6.75□□□□□ -1.33
VPS13D-202ENST00000460333 GYS2P54840 703 aa6.75□□□□□ -1.33
VPS13D-202ENST00000460333 DPCR1Q3MIW9 517 aa6.75□□□□□ -1.33
VPS13D-202ENST00000460333 HHATQ5VTY9 493 aa6.75□□□□□ -1.33
VPS13D-202ENST00000460333 CCDC25Q86WR0 208 aa6.75□□□□□ -1.33
VPS13D-202ENST00000460333 ELOA2Q8IYF1 753 aaPredicted RBP6.75□□□□□ -1.33
VPS13D-202ENST00000460333 SMCR8Q8TEV9 937 aaPredicted RBP6.75□□□□□ -1.33
VPS13D-202ENST00000460333 SPDL1Q96EA4 605 aa6.75□□□□□ -1.33
VPS13D-202ENST00000460333 TSNARE1Q96NA8 513 aa6.75□□□□□ -1.33
VPS13D-202ENST00000460333 FAM217BQ9NTX9 383 aaPredicted RBP6.75□□□□□ -1.33
VPS13D-202ENST00000460333 MTMR4Q9NYA4 1195 aa6.75□□□□□ -1.33
VPS13D-202ENST00000460333 SERTAD1Q9UHV2 236 aa6.75□□□□□ -1.33
VPS13D-202ENST00000460333 MORC3Q14149 939 aa6.75□□□□□ -1.33
VPS13D-202ENST00000460333 CCDC144BQ3MJ40 725 aa6.75□□□□□ -1.33
VPS13D-202ENST00000460333 SUPT20HL1Q3ZLR7 823 aa6.75□□□□□ -1.33
VPS13D-202ENST00000460333 CIAPIN1Q6FI81 312 aa6.75□□□□□ -1.33
VPS13D-202ENST00000460333 RCSD1Q6JBY9 416 aa6.75□□□□□ -1.33
VPS13D-202ENST00000460333 USP17L2Q6R6M4 530 aa6.75□□□□□ -1.33
VPS13D-202ENST00000460333 MIER3Q7Z3K6 550 aa6.75□□□□□ -1.33
VPS13D-202ENST00000460333 AMIGO3Q86WK7 504 aa6.75□□□□□ -1.33
VPS13D-202ENST00000460333 C2orf69Q8N8R5 385 aa6.75□□□□□ -1.33
VPS13D-202ENST00000460333 INTS9Q9NV88 658 aaKnown RBP6.75□□□□□ -1.33
VPS13D-202ENST00000460333 SLC5A4Q9NY91 659 aa6.75□□□□□ -1.33
VPS13D-202ENST00000460333 PPP1R9AQ9ULJ8 1098 aa6.75□□□□□ -1.33
VPS13D-202ENST00000460333 FAF1Q9UNN5 650 aaPredicted RBP6.75□□□□□ -1.33
VPS13D-202ENST00000460333 FRMPD2Q68DX3 1309 aaPredicted RBP6.75□□□□□ -1.33
VPS13D-202ENST00000460333 ROBO3Q96MS0 1386 aa6.75□□□□□ -1.33
VPS13D-202ENST00000460333 FOSP01100 380 aaPredicted RBP6.75□□□□□ -1.33
VPS13D-202ENST00000460333 MYL1P05976 194 aa6.75□□□□□ -1.33
VPS13D-202ENST00000460333 OR52Z1P0C646 297 aa6.75□□□□□ -1.33
VPS13D-202ENST00000460333 COL9A3Q14050 684 aaPredicted RBP6.75□□□□□ -1.33
VPS13D-202ENST00000460333 CCDC65Q8IXS2 484 aa6.75□□□□□ -1.33
VPS13D-202ENST00000460333 PROM2Q8N271 834 aa6.75□□□□□ -1.33
VPS13D-202ENST00000460333 GFM2Q969S9 779 aaKnown RBP6.75□□□□□ -1.33
VPS13D-202ENST00000460333 ZMAT2Q96NC0 199 aaKnown RBP6.75□□□□□ -1.33
VPS13D-202ENST00000460333 UBA5Q9GZZ9 404 aa6.75□□□□□ -1.33
VPS13D-202ENST00000460333 GOLPH3LQ9H4A5 285 aa6.75□□□□□ -1.33
VPS13D-202ENST00000460333 PSTPIP2Q9H939 334 aa6.75□□□□□ -1.33
VPS13D-202ENST00000460333 DDX60Q8IY21 1712 aaKnown RBP6.75□□□□□ -1.33
VPS13D-202ENST00000460333 TCP10L2B9ZVM9 353 aa6.74□□□□□ -1.33
VPS13D-202ENST00000460333 HOXA7P31268 230 aaPredicted RBP6.74□□□□□ -1.33
VPS13D-202ENST00000460333 CUL1Q13616 776 aa6.74□□□□□ -1.33
VPS13D-202ENST00000460333 CALCRLQ16602 461 aa6.74□□□□□ -1.33
VPS13D-202ENST00000460333 INF2Q27J81 1249 aa6.74□□□□□ -1.33
VPS13D-202ENST00000460333 LONRF3Q496Y0 759 aa6.74□□□□□ -1.33
VPS13D-202ENST00000460333 CCDC92Q53HC0 331 aaPredicted RBP6.74□□□□□ -1.33
VPS13D-202ENST00000460333 SFMBT2Q5VUG0 894 aa6.74□□□□□ -1.33
VPS13D-202ENST00000460333 ANKRD20A3Q5VUR7 823 aa6.74□□□□□ -1.33
VPS13D-202ENST00000460333 TRMT44Q8IYL2 757 aaKnown RBP6.74□□□□□ -1.33
VPS13D-202ENST00000460333 PIGSQ96S52 555 aa6.74□□□□□ -1.33
VPS13D-202ENST00000460333 MTFR1LQ9H019 292 aa6.74□□□□□ -1.33
VPS13D-202ENST00000460333 IRAK4Q9NWZ3 460 aa6.74□□□□□ -1.33
VPS13D-202ENST00000460333 ZNRF3Q9ULT6 936 aa6.74□□□□□ -1.33
VPS13D-202ENST00000460333 OPHN1O60890 802 aa6.74□□□□□ -1.33
VPS13D-202ENST00000460333 POLE2P56282 527 aa6.74□□□□□ -1.33
VPS13D-202ENST00000460333 TGFB2P61812 414 aa6.74□□□□□ -1.33
VPS13D-202ENST00000460333 CCZ1BP86790 482 aa6.74□□□□□ -1.33
VPS13D-202ENST00000460333 CCZ1P86791 482 aaPredicted RBP6.74□□□□□ -1.33
VPS13D-202ENST00000460333 PRKG1Q13976 671 aa6.74□□□□□ -1.33
VPS13D-202ENST00000460333 PPP4R3AQ6IN85 833 aa6.74□□□□□ -1.33
VPS13D-202ENST00000460333 SLC30A9Q6PML9 568 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms