RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 TUFT1Q9NNX1 390 aa13.87□□□□□ -0.19
HDAC4-206ENST00000460235 XPNPEP3Q9NQH7 507 aa13.87□□□□□ -0.19
HDAC4-206ENST00000460235 GNEQ9Y223 722 aaKnown RBP13.87□□□□□ -0.19
HDAC4-206ENST00000460235 A0A1W2PQ27 194 aa13.86□□□□□ -0.19
HDAC4-206ENST00000460235 A0A1W2PQ64 194 aa13.86□□□□□ -0.19
HDAC4-206ENST00000460235 A0A1W2PQD8 194 aa13.86□□□□□ -0.19
HDAC4-206ENST00000460235 DDX11L8A8MPP1 907 aa13.86□□□□□ -0.19
HDAC4-206ENST00000460235 DDX39AO00148 427 aaKnown RBP13.86□□□□□ -0.19
HDAC4-206ENST00000460235 BACH1O14867 736 aa13.86□□□□□ -0.19
HDAC4-206ENST00000460235 DHX15O43143 795 aaKnown RBP13.86□□□□□ -0.19
HDAC4-206ENST00000460235 ATP9AO75110 1047 aa13.86□□□□□ -0.19
HDAC4-206ENST00000460235 CABYRO75952 493 aa13.86□□□□□ -0.19
HDAC4-206ENST00000460235 GJA9P57773 515 aa13.86□□□□□ -0.19
HDAC4-206ENST00000460235 ACTR2P61160 394 aa13.86□□□□□ -0.19
HDAC4-206ENST00000460235 SEMA3FQ13275 785 aa13.86□□□□□ -0.19
HDAC4-206ENST00000460235 ITGB3BPQ13352 177 aaPredicted RBP13.86□□□□□ -0.19
HDAC4-206ENST00000460235 NCAPH2Q6IBW4 605 aa13.86□□□□□ -0.19
HDAC4-206ENST00000460235 TMEM87AQ8NBN3 555 aa13.86□□□□□ -0.19
HDAC4-206ENST00000460235 SH3TC2Q8TF17 1288 aa13.86□□□□□ -0.19
HDAC4-206ENST00000460235 FAM167AQ96KS9 214 aa13.86□□□□□ -0.19
HDAC4-206ENST00000460235 KATNAL1Q9BW62 490 aa13.86□□□□□ -0.19
HDAC4-206ENST00000460235 SEZ6LQ9BYH1 1024 aa13.86□□□□□ -0.19
HDAC4-206ENST00000460235 RNF208Q9H0X6 261 aa13.86□□□□□ -0.19
HDAC4-206ENST00000460235 FBXO2Q9UK22 296 aaPredicted RBP13.86□□□□□ -0.19
HDAC4-206ENST00000460235 LCTP09848 1927 aa13.86□□□□□ -0.19
HDAC4-206ENST00000460235 A6NJR5 290 aa13.85□□□□□ -0.19
HDAC4-206ENST00000460235 CHMP2AO43633 222 aa13.85□□□□□ -0.19
HDAC4-206ENST00000460235 C6orf222P0C671 652 aaPredicted RBP13.85□□□□□ -0.19
HDAC4-206ENST00000460235 XRCC6P12956 609 aaKnown RBP eCLIP13.85□□□□□ -0.19
HDAC4-206ENST00000460235 CCL5P13501 91 aa13.85□□□□□ -0.19
HDAC4-206ENST00000460235 CMA1P23946 247 aa13.85□□□□□ -0.19
HDAC4-206ENST00000460235 CCND3P30281 292 aaPredicted RBP13.85□□□□□ -0.19
HDAC4-206ENST00000460235 QARSP47897 775 aaKnown RBP13.85□□□□□ -0.19
HDAC4-206ENST00000460235 PSMC5P62195 406 aa13.85□□□□□ -0.19
HDAC4-206ENST00000460235 NKX3-2P78367 333 aa13.85□□□□□ -0.19
HDAC4-206ENST00000460235 SP2Q02086 613 aa13.85□□□□□ -0.19
HDAC4-206ENST00000460235 ARHGAP1Q07960 439 aa13.85□□□□□ -0.19
HDAC4-206ENST00000460235 FSCN1Q16658 493 aaKnown RBP13.85□□□□□ -0.19
HDAC4-206ENST00000460235 GNASQ5JWF2 1037 aa13.85□□□□□ -0.19
HDAC4-206ENST00000460235 CCDC73Q6ZRK6 1079 aa13.85□□□□□ -0.19
HDAC4-206ENST00000460235 OTUD6AQ7L8S5 288 aa13.85□□□□□ -0.19
HDAC4-206ENST00000460235 EXOC8Q8IYI6 725 aa13.85□□□□□ -0.19
HDAC4-206ENST00000460235 GLG1Q92896 1179 aa13.85□□□□□ -0.19
HDAC4-206ENST00000460235 CCDC43Q96MW1 224 aaKnown RBP13.85□□□□□ -0.19
HDAC4-206ENST00000460235 TSEN34Q9BSV6 310 aaKnown RBP13.85□□□□□ -0.19
HDAC4-206ENST00000460235 POLR3CQ9BUI4 534 aaPredicted RBP13.85□□□□□ -0.19
HDAC4-206ENST00000460235 FTOQ9C0B1 505 aaKnown RBP eCLIP13.85□□□□□ -0.19
HDAC4-206ENST00000460235 CCSER1Q9C0I3 900 aa13.85□□□□□ -0.19
HDAC4-206ENST00000460235 UPF3AQ9H1J1 476 aaKnown RBP13.85□□□□□ -0.19
HDAC4-206ENST00000460235 UNC45AQ9H3U1 944 aa13.85□□□□□ -0.19
HDAC4-206ENST00000460235 ZSWIM4Q9H7M6 989 aa13.85□□□□□ -0.19
HDAC4-206ENST00000460235 NRBP2Q9NSY0 501 aa13.85□□□□□ -0.19
HDAC4-206ENST00000460235 USP25Q9UHP3 1055 aa13.85□□□□□ -0.19
HDAC4-206ENST00000460235 VAV3Q9UKW4 847 aa13.85□□□□□ -0.19
HDAC4-206ENST00000460235 PCDHA7Q9UN72 937 aa13.85□□□□□ -0.19
HDAC4-206ENST00000460235 KIAA1217Q5T5P2 1943 aa13.85□□□□□ -0.19
HDAC4-206ENST00000460235 KBTBD13C9JR72 458 aa13.84□□□□□ -0.19
HDAC4-206ENST00000460235 WNT7AO00755 349 aa13.84□□□□□ -0.19
HDAC4-206ENST00000460235 ATG7O95352 703 aa13.84□□□□□ -0.19
HDAC4-206ENST00000460235 ARIH2O95376 493 aa13.84□□□□□ -0.19
HDAC4-206ENST00000460235 SUPT20HL2P0C7V6 817 aa13.84□□□□□ -0.19
HDAC4-206ENST00000460235 RPA1P27694 616 aa13.84□□□□□ -0.19
HDAC4-206ENST00000460235 CST5P28325 142 aaPredicted RBP13.84□□□□□ -0.19
HDAC4-206ENST00000460235 TCF7P36402 384 aaPredicted RBP13.84□□□□□ -0.19
HDAC4-206ENST00000460235 CCT6AP40227 531 aaKnown RBP13.84□□□□□ -0.19
HDAC4-206ENST00000460235 STAT5BP51692 787 aa13.84□□□□□ -0.19
HDAC4-206ENST00000460235 UBE2HP62256 183 aa13.84□□□□□ -0.19
HDAC4-206ENST00000460235 SP4Q02446 784 aa13.84□□□□□ -0.19
HDAC4-206ENST00000460235 PLPPR4Q7Z2D5 763 aa13.84□□□□□ -0.19
HDAC4-206ENST00000460235 TRPV1Q8NER1 839 aa13.84□□□□□ -0.19
HDAC4-206ENST00000460235 SNX29Q8TEQ0 813 aa13.84□□□□□ -0.19
HDAC4-206ENST00000460235 AFG1LQ8WV93 481 aa13.84□□□□□ -0.19
HDAC4-206ENST00000460235 ZNF333Q96JL9 665 aa13.84□□□□□ -0.19
HDAC4-206ENST00000460235 NACC1Q96RE7 527 aa13.84□□□□□ -0.19
HDAC4-206ENST00000460235 GPR20Q99678 358 aa13.84□□□□□ -0.19
HDAC4-206ENST00000460235 LRRC27Q9C0I9 530 aa13.84□□□□□ -0.19
HDAC4-206ENST00000460235 CSRNP2Q9H175 543 aa13.84□□□□□ -0.19
HDAC4-206ENST00000460235 CUEDC2Q9H467 287 aa13.84□□□□□ -0.19
HDAC4-206ENST00000460235 ZNF302Q9NR11 478 aa13.84□□□□□ -0.19
HDAC4-206ENST00000460235 ERAP1Q9NZ08 941 aa13.84□□□□□ -0.19
HDAC4-206ENST00000460235 HOOK1Q9UJC3 728 aaKnown RBP13.84□□□□□ -0.19
HDAC4-206ENST00000460235 PPME1Q9Y570 386 aa13.84□□□□□ -0.19
HDAC4-206ENST00000460235 DDX49Q9Y6V7 483 aaKnown RBP13.84□□□□□ -0.19
HDAC4-206ENST00000460235 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.83□□□□□ -0.2
HDAC4-206ENST00000460235 MOXD2PA6NHM9 499 aa13.83□□□□□ -0.2
HDAC4-206ENST00000460235 GJB1P08034 283 aa13.83□□□□□ -0.2
HDAC4-206ENST00000460235 TRIM32Q13049 653 aa13.83□□□□□ -0.2
HDAC4-206ENST00000460235 PDXDC2PQ6P474 469 aa13.83□□□□□ -0.2
HDAC4-206ENST00000460235 B3GNT9Q6UX72 402 aa13.83□□□□□ -0.2
HDAC4-206ENST00000460235 ABHD15Q6UXT9 468 aa13.83□□□□□ -0.2
HDAC4-206ENST00000460235 CABP7Q86V35 215 aa13.83□□□□□ -0.2
HDAC4-206ENST00000460235 CKAP2LQ8IYA6 745 aa13.83□□□□□ -0.2
HDAC4-206ENST00000460235 IQUBQ8NA54 791 aa13.83□□□□□ -0.2
HDAC4-206ENST00000460235 AFAP1L1Q8TED9 768 aa13.83□□□□□ -0.2
HDAC4-206ENST00000460235 MRPS27Q92552 414 aaKnown RBP13.83□□□□□ -0.2
HDAC4-206ENST00000460235 EIF2AK1Q9BQI3 630 aaKnown RBP13.83□□□□□ -0.2
HDAC4-206ENST00000460235 PAK6Q9NQU5 681 aaPredicted RBP13.83□□□□□ -0.2
HDAC4-206ENST00000460235 DNM3Q9UQ16 869 aa13.83□□□□□ -0.2
HDAC4-206ENST00000460235 MCM3APO60318 1980 aa13.83□□□□□ -0.2
HDAC4-206ENST00000460235 EMSYQ7Z589 1322 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms