RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 TSGA10Q9BZW7 698 aa20.03■□□□□ 0.8
HPS3-202ENST00000460120 KCNMB3Q9NPA1 279 aa20.03■□□□□ 0.8
HPS3-202ENST00000460120 RGL1Q9NZL6 768 aa20.03■□□□□ 0.8
HPS3-202ENST00000460120 RRP1BQ14684 758 aaKnown RBP20.02■□□□□ 0.8
HPS3-202ENST00000460120 DCAF17Q5H9S7 520 aaPredicted RBP20.02■□□□□ 0.8
HPS3-202ENST00000460120 SFR1Q86XK3 245 aa20.02■□□□□ 0.8
HPS3-202ENST00000460120 AMNQ9BXJ7 453 aa20.02■□□□□ 0.8
HPS3-202ENST00000460120 GBP3Q9H0R5 595 aa20.02■□□□□ 0.8
HPS3-202ENST00000460120 SNX12Q9UMY4 172 aa20.02■□□□□ 0.8
HPS3-202ENST00000460120 PACSIN2Q9UNF0 486 aaPredicted RBP20.02■□□□□ 0.8
HPS3-202ENST00000460120 TLR2O60603 784 aa20.02■□□□□ 0.79
HPS3-202ENST00000460120 NOL4O94818 638 aa20.02■□□□□ 0.79
HPS3-202ENST00000460120 MYBP10242 640 aa20.02■□□□□ 0.79
HPS3-202ENST00000460120 NR2F2P24468 414 aa20.02■□□□□ 0.79
HPS3-202ENST00000460120 ECE1P42892 770 aa20.02■□□□□ 0.79
HPS3-202ENST00000460120 HSP90B2PQ58FF3 399 aa20.02■□□□□ 0.79
HPS3-202ENST00000460120 SFMBT2Q5VUG0 894 aa20.02■□□□□ 0.79
HPS3-202ENST00000460120 TCERG1LQ5VWI1 586 aa20.02■□□□□ 0.79
HPS3-202ENST00000460120 TRIM58Q8NG06 486 aa20.02■□□□□ 0.79
HPS3-202ENST00000460120 PURBQ96QR8 312 aaKnown RBP20.02■□□□□ 0.79
HPS3-202ENST00000460120 DHX36Q9H2U1 1008 aaKnown RBP20.02■□□□□ 0.79
HPS3-202ENST00000460120 SRCAPQ6ZRS2 3230 aa20.01■□□□□ 0.79
HPS3-202ENST00000460120 CLRN2A0PK11 232 aa20.01■□□□□ 0.79
HPS3-202ENST00000460120 TCP10L2B9ZVM9 353 aa20.01■□□□□ 0.79
HPS3-202ENST00000460120 HNRNPH2P55795 449 aaKnown RBP20.01■□□□□ 0.79
HPS3-202ENST00000460120 CCDC181Q5TID7 509 aa20.01■□□□□ 0.79
HPS3-202ENST00000460120 PIGOQ8TEQ8 1089 aa20.01■□□□□ 0.79
HPS3-202ENST00000460120 TBC1D5Q92609 795 aa20.01■□□□□ 0.79
HPS3-202ENST00000460120 REEP2Q9BRK0 252 aa20.01■□□□□ 0.79
HPS3-202ENST00000460120 PCDHA2Q9Y5H9 948 aa20.01■□□□□ 0.79
HPS3-202ENST00000460120 FTCDO95954 541 aa20.01■□□□□ 0.79
HPS3-202ENST00000460120 CDK17Q00537 523 aa20.01■□□□□ 0.79
HPS3-202ENST00000460120 DACT2Q5SW24 774 aa20.01■□□□□ 0.79
HPS3-202ENST00000460120 HGSNATQ68CP4 663 aa20.01■□□□□ 0.79
HPS3-202ENST00000460120 CCDC174Q6PII3 467 aa20.01■□□□□ 0.79
HPS3-202ENST00000460120 PODNQ7Z5L7 613 aa20.01■□□□□ 0.79
HPS3-202ENST00000460120 CREG2Q8IUH2 290 aa20.01■□□□□ 0.79
HPS3-202ENST00000460120 LRRC1Q9BTT6 524 aa20.01■□□□□ 0.79
HPS3-202ENST00000460120 PACSIN1Q9BY11 444 aa20.01■□□□□ 0.79
HPS3-202ENST00000460120 BHMT2Q9H2M3 363 aa20.01■□□□□ 0.79
HPS3-202ENST00000460120 JRKLQ9Y4A0 524 aa20.01■□□□□ 0.79
HPS3-202ENST00000460120 A0A1W2PRG0 241 aa20■□□□□ 0.79
HPS3-202ENST00000460120 CLIC2O15247 247 aa20■□□□□ 0.79
HPS3-202ENST00000460120 SLC12A3P55017 1021 aa20■□□□□ 0.79
HPS3-202ENST00000460120 KCNA1Q09470 495 aa20■□□□□ 0.79
HPS3-202ENST00000460120 DCAF4Q8WV16 495 aa20■□□□□ 0.79
HPS3-202ENST00000460120 ALS2CR12Q96Q35 445 aa20■□□□□ 0.79
HPS3-202ENST00000460120 CSRNP1Q96S65 589 aa20■□□□□ 0.79
HPS3-202ENST00000460120 OSBPL9Q96SU4 736 aa20■□□□□ 0.79
HPS3-202ENST00000460120 EHD4Q9H223 541 aa20■□□□□ 0.79
HPS3-202ENST00000460120 MYH4Q9Y623 1939 aa20■□□□□ 0.79
HPS3-202ENST00000460120 ZBTB39O15060 712 aa20■□□□□ 0.79
HPS3-202ENST00000460120 CFBP00751 764 aa20■□□□□ 0.79
HPS3-202ENST00000460120 HNRNPH3P31942 346 aaKnown RBP20■□□□□ 0.79
HPS3-202ENST00000460120 SYDE2Q5VT97 1194 aa20■□□□□ 0.79
HPS3-202ENST00000460120 KCTD10Q9H3F6 313 aa20■□□□□ 0.79
HPS3-202ENST00000460120 NYAP2Q9P242 653 aa20■□□□□ 0.79
HPS3-202ENST00000460120 ADAMTS1Q9UHI8 967 aa20■□□□□ 0.79
HPS3-202ENST00000460120 CCDC66A2RUB6 948 aa19.99■□□□□ 0.79
HPS3-202ENST00000460120 CTTNQ14247 550 aaKnown RBP19.99■□□□□ 0.79
HPS3-202ENST00000460120 SKIDA1Q1XH10 827 aa19.99■□□□□ 0.79
HPS3-202ENST00000460120 SLC9C1Q4G0N8 1177 aa19.99■□□□□ 0.79
HPS3-202ENST00000460120 WDR93Q6P2C0 686 aa19.99■□□□□ 0.79
HPS3-202ENST00000460120 KSR1Q8IVT5 923 aa19.99■□□□□ 0.79
HPS3-202ENST00000460120 ETNPPLQ8TBG4 499 aa19.99■□□□□ 0.79
HPS3-202ENST00000460120 PRMT6Q96LA8 375 aaPredicted RBP19.99■□□□□ 0.79
HPS3-202ENST00000460120 SCAF8Q9UPN6 1271 aaKnown RBP19.99■□□□□ 0.79
HPS3-202ENST00000460120 DNM3Q9UQ16 869 aa19.99■□□□□ 0.79
HPS3-202ENST00000460120 LTBP1Q14766 1721 aa19.99■□□□□ 0.79
HPS3-202ENST00000460120 ANO9A1A5B4 782 aa19.99■□□□□ 0.79
HPS3-202ENST00000460120 SLC9A1P19634 815 aa19.99■□□□□ 0.79
HPS3-202ENST00000460120 USP11P51784 963 aa19.99■□□□□ 0.79
HPS3-202ENST00000460120 KCNH2Q12809 1159 aa19.99■□□□□ 0.79
HPS3-202ENST00000460120 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.99■□□□□ 0.79
HPS3-202ENST00000460120 MYO3BQ8WXR4 1341 aa19.99■□□□□ 0.79
HPS3-202ENST00000460120 MSH4O15457 936 aa19.98■□□□□ 0.79
HPS3-202ENST00000460120 SPATA31C1P0DKV0 1188 aa19.98■□□□□ 0.79
HPS3-202ENST00000460120 TUBB4BP68371 445 aa19.98■□□□□ 0.79
HPS3-202ENST00000460120 GIT2Q14161 759 aa19.98■□□□□ 0.79
HPS3-202ENST00000460120 HAUS3Q68CZ6 603 aa19.98■□□□□ 0.79
HPS3-202ENST00000460120 TMEM179Q6ZVK1 233 aa19.98■□□□□ 0.79
HPS3-202ENST00000460120 GOLPH3Q9H4A6 298 aa19.98■□□□□ 0.79
HPS3-202ENST00000460120 DMGDHQ9UI17 866 aaKnown RBP19.98■□□□□ 0.79
HPS3-202ENST00000460120 UTRNP46939 3433 aa19.98■□□□□ 0.79
HPS3-202ENST00000460120 FOCADQ5VW36 1801 aa19.98■□□□□ 0.79
HPS3-202ENST00000460120 ANKRD31Q8N7Z5 1873 aa19.98■□□□□ 0.79
HPS3-202ENST00000460120 EML1O00423 815 aa19.98■□□□□ 0.79
HPS3-202ENST00000460120 BMP3P12645 472 aa19.98■□□□□ 0.79
HPS3-202ENST00000460120 SPIRE1Q08AE8 756 aa19.98■□□□□ 0.79
HPS3-202ENST00000460120 RBM26Q5T8P6 1007 aaKnown RBP19.98■□□□□ 0.79
HPS3-202ENST00000460120 ZNF662Q6ZS27 426 aa19.98■□□□□ 0.79
HPS3-202ENST00000460120 TRIM59Q8IWR1 403 aa19.98■□□□□ 0.79
HPS3-202ENST00000460120 SLFN12Q8IYM2 578 aa19.98■□□□□ 0.79
HPS3-202ENST00000460120 RUSC1Q9BVN2 902 aa19.98■□□□□ 0.79
HPS3-202ENST00000460120 CEP72Q9P209 647 aa19.98■□□□□ 0.79
HPS3-202ENST00000460120 HDAC9Q9UKV0 1011 aa19.98■□□□□ 0.79
HPS3-202ENST00000460120 CETN3O15182 167 aa19.97■□□□□ 0.79
HPS3-202ENST00000460120 GCNT3O95395 438 aa19.97■□□□□ 0.79
HPS3-202ENST00000460120 KLHL30Q0D2K2 578 aa19.97■□□□□ 0.79
HPS3-202ENST00000460120 HYIQ5T013 277 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms