RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 TXKP42681 527 aa6.75□□□□□ -1.33
UBQLN4-202ENST00000459954 BTDP43251 543 aa6.75□□□□□ -1.33
UBQLN4-202ENST00000459954 IRAK1P51617 712 aa6.75□□□□□ -1.33
UBQLN4-202ENST00000459954 USP11P51784 963 aa6.75□□□□□ -1.33
UBQLN4-202ENST00000459954 EIF6P56537 245 aaKnown RBP6.75□□□□□ -1.33
UBQLN4-202ENST00000459954 RHBDL3P58872 404 aa6.75□□□□□ -1.33
UBQLN4-202ENST00000459954 CYP27A1Q02318 531 aa6.75□□□□□ -1.33
UBQLN4-202ENST00000459954 EVX2Q03828 476 aa6.75□□□□□ -1.33
UBQLN4-202ENST00000459954 GABPAQ06546 454 aa6.75□□□□□ -1.33
UBQLN4-202ENST00000459954 KCNMA1Q12791 1236 aa6.75□□□□□ -1.33
UBQLN4-202ENST00000459954 PAK2Q13177 524 aa6.75□□□□□ -1.33
UBQLN4-202ENST00000459954 SLC18A3Q16572 532 aa6.75□□□□□ -1.33
UBQLN4-202ENST00000459954 MEI1Q5TIA1 1274 aa6.75□□□□□ -1.33
UBQLN4-202ENST00000459954 HAUS3Q68CZ6 603 aa6.75□□□□□ -1.33
UBQLN4-202ENST00000459954 RRAGAQ7L523 313 aa6.75□□□□□ -1.33
UBQLN4-202ENST00000459954 CACNA2D4Q7Z3S7 1137 aa6.75□□□□□ -1.33
UBQLN4-202ENST00000459954 FRMD5Q7Z6J6 570 aa6.75□□□□□ -1.33
UBQLN4-202ENST00000459954 TXNRD3Q86VQ6 643 aa6.75□□□□□ -1.33
UBQLN4-202ENST00000459954 FMNL3Q8IVF7 1028 aa6.75□□□□□ -1.33
UBQLN4-202ENST00000459954 TRIM59Q8IWR1 403 aa6.75□□□□□ -1.33
UBQLN4-202ENST00000459954 TEX11Q8IYF3 940 aa6.75□□□□□ -1.33
UBQLN4-202ENST00000459954 IQCKQ8N0W5 287 aa6.75□□□□□ -1.33
UBQLN4-202ENST00000459954 C3orf20Q8ND61 904 aa6.75□□□□□ -1.33
UBQLN4-202ENST00000459954 DDX12PQ92771 950 aa6.75□□□□□ -1.33
UBQLN4-202ENST00000459954 PBKQ96KB5 322 aa6.75□□□□□ -1.33
UBQLN4-202ENST00000459954 CAPZA3Q96KX2 299 aa6.75□□□□□ -1.33
UBQLN4-202ENST00000459954 CALR3Q96L12 384 aaKnown RBP6.75□□□□□ -1.33
UBQLN4-202ENST00000459954 PIGSQ96S52 555 aa6.75□□□□□ -1.33
UBQLN4-202ENST00000459954 LRRC1Q9BTT6 524 aa6.75□□□□□ -1.33
UBQLN4-202ENST00000459954 COA1Q9GZY4 146 aa6.75□□□□□ -1.33
UBQLN4-202ENST00000459954 CD209Q9NNX6 404 aa6.75□□□□□ -1.33
UBQLN4-202ENST00000459954 SLC39A2Q9NP94 309 aa6.75□□□□□ -1.33
UBQLN4-202ENST00000459954 MTMR4Q9NYA4 1195 aa6.75□□□□□ -1.33
UBQLN4-202ENST00000459954 INTUQ9ULD6 942 aa6.75□□□□□ -1.33
UBQLN4-202ENST00000459954 ZNRF3Q9ULT6 936 aa6.75□□□□□ -1.33
UBQLN4-202ENST00000459954 CAPN6Q9Y6Q1 641 aa6.75□□□□□ -1.33
UBQLN4-202ENST00000459954 DUSP10Q9Y6W6 482 aa6.75□□□□□ -1.33
UBQLN4-202ENST00000459954 WDR81Q562E7 1941 aa6.75□□□□□ -1.33
UBQLN4-202ENST00000459954 SIPA1L1O43166 1804 aa6.75□□□□□ -1.33
UBQLN4-202ENST00000459954 SLX4Q8IY92 1834 aa6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 A0A0A6YYK5 440 aaPredicted RBP6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 SHTN1A0MZ66 631 aa6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 GTPBP10A4D1E9 387 aaKnown RBP6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 GLTPD2A6NH11 291 aa6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 G3V3G9 751 aa6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 C6orf229H3BNL8 230 aa6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 FZD9O00144 591 aa6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 NFKBIEO00221 500 aa6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 EBAG9O00559 213 aa6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 ZNF185O15231 689 aa6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 EDIL3O43854 480 aa6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 NOL4O94818 638 aa6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 MOCS3O95396 460 aa6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 MYBP10242 640 aa6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 YY1P25490 414 aa6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 PRKCIP41743 596 aa6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 KLK7P49862 253 aa6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 NPEPPSP55786 919 aa6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 C2orf54Q08AI8 447 aa6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 COASYQ13057 564 aa6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 CLUL1Q15846 466 aa6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 CDC37Q16543 378 aaPredicted RBP6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 NFIL3Q16649 462 aa6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 SPDYCQ5MJ68 293 aa6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 FAM26FQ5R3K3 315 aa6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 FAM83BQ5T0W9 1011 aa6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 DCAF8Q5TAQ9 597 aa6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 C9orf131Q5VYM1 1079 aa6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 C8orf74Q6P047 294 aa6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 USP17L2Q6R6M4 530 aa6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 LRIG3Q6UXM1 1119 aa6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 KDM7AQ6ZMT4 941 aa6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 B4GALNT4Q76KP1 1039 aa6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 SND1Q7KZF4 910 aaKnown RBP eCLIP6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 KRT26Q7Z3Y9 468 aa6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 MAPKAPK5Q8IW41 473 aa6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 NIM1KQ8IY84 436 aa6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 SLFN12Q8IYM2 578 aa6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 GPC2Q8N158 579 aa6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 LARGE2Q8N3Y3 721 aa6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 CCDC24Q8N4L8 307 aa6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 SNX29Q8TEQ0 813 aa6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 LMBR1Q8WVP7 490 aa6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 CUL5Q93034 780 aa6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 CEP95Q96GE4 821 aa6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 RUFY1Q96T51 708 aa6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 PLIN2Q99541 437 aa6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 CAPS2Q9BXY5 557 aa6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 PANK4Q9NVE7 773 aa6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 RNF181Q9P0P0 153 aa6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 BIN2Q9UBW5 565 aaPredicted RBP6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 DMGDHQ9UI17 866 aaKnown RBP6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 TMEM59LQ9UK28 342 aa6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 TRAF3IP3Q9Y228 551 aa6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 DIS3Q9Y2L1 958 aaKnown RBP6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 PCDHA2Q9Y5H9 948 aa6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 RBBP6Q7Z6E9 1792 aaKnown RBP6.74□□□□□ -1.33
UBQLN4-202ENST00000459954 ZNF646O15015 1829 aaPredicted RBP6.73□□□□□ -1.33
UBQLN4-202ENST00000459954 BRCA1P38398 1863 aaKnown RBP6.73□□□□□ -1.33
UBQLN4-202ENST00000459954 ANKRD31Q8N7Z5 1873 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms