RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 SLC26A2P50443 739 aa11.44□□□□□ -0.58
HDLBP-228ENST00000459788 CHMP4BP1P59074 171 aa11.44□□□□□ -0.58
HDLBP-228ENST00000459788 IKBKEQ14164 716 aa11.44□□□□□ -0.58
HDLBP-228ENST00000459788 GPNMBQ14956 572 aa11.44□□□□□ -0.58
HDLBP-228ENST00000459788 CEP55Q53EZ4 464 aa11.44□□□□□ -0.58
HDLBP-228ENST00000459788 FAM26DQ5JW98 314 aa11.44□□□□□ -0.58
HDLBP-228ENST00000459788 TAF2Q6P1X5 1199 aa11.44□□□□□ -0.58
HDLBP-228ENST00000459788 TRAF7Q6Q0C0 670 aa11.44□□□□□ -0.58
HDLBP-228ENST00000459788 SKAP1Q86WV1 359 aa11.44□□□□□ -0.58
HDLBP-228ENST00000459788 HERC6Q8IVU3 1022 aa11.44□□□□□ -0.58
HDLBP-228ENST00000459788 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.44□□□□□ -0.58
HDLBP-228ENST00000459788 BICD2Q8TD16 824 aa11.44□□□□□ -0.58
HDLBP-228ENST00000459788 RNF26Q9BY78 433 aaPredicted RBP11.44□□□□□ -0.58
HDLBP-228ENST00000459788 ZMYND12Q9H0C1 365 aa11.44□□□□□ -0.58
HDLBP-228ENST00000459788 RNPEPQ9H4A4 650 aa11.44□□□□□ -0.58
HDLBP-228ENST00000459788 SMARCAD1Q9H4L7 1026 aa11.44□□□□□ -0.58
HDLBP-228ENST00000459788 ZSWIM6Q9HCJ5 1215 aa11.44□□□□□ -0.58
HDLBP-228ENST00000459788 C6orf50Q9HD87 102 aa11.44□□□□□ -0.58
HDLBP-228ENST00000459788 ERAP1Q9NZ08 941 aa11.44□□□□□ -0.58
HDLBP-228ENST00000459788 RALGAPA2Q2PPJ7 1873 aa11.44□□□□□ -0.58
HDLBP-228ENST00000459788 PRRC2BQ5JSZ5 2229 aaKnown RBP11.43□□□□□ -0.58
HDLBP-228ENST00000459788 RRN3P2A6NIE6 340 aa11.43□□□□□ -0.58
HDLBP-228ENST00000459788 RSPH10B2B2RC85 870 aa11.43□□□□□ -0.58
HDLBP-228ENST00000459788 MEIS1O00470 390 aa11.43□□□□□ -0.58
HDLBP-228ENST00000459788 NBNO60934 754 aa11.43□□□□□ -0.58
HDLBP-228ENST00000459788 LGR5O75473 907 aa11.43□□□□□ -0.58
HDLBP-228ENST00000459788 RSPH10BP0C881 870 aa11.43□□□□□ -0.58
HDLBP-228ENST00000459788 IFNAR1P17181 557 aa11.43□□□□□ -0.58
HDLBP-228ENST00000459788 TCF7P36402 384 aaPredicted RBP11.43□□□□□ -0.58
HDLBP-228ENST00000459788 WDR5P61964 334 aaKnown RBP11.43□□□□□ -0.58
HDLBP-228ENST00000459788 AKAP17AQ02040 695 aaKnown RBP11.43□□□□□ -0.58
HDLBP-228ENST00000459788 UBE2SQ16763 222 aa11.43□□□□□ -0.58
HDLBP-228ENST00000459788 ZNF618Q5T7W0 954 aa11.43□□□□□ -0.58
HDLBP-228ENST00000459788 PPP2R2DQ66LE6 453 aa11.43□□□□□ -0.58
HDLBP-228ENST00000459788 RUFY3Q7L099 469 aa11.43□□□□□ -0.58
HDLBP-228ENST00000459788 PLPPR4Q7Z2D5 763 aa11.43□□□□□ -0.58
HDLBP-228ENST00000459788 CCDC148Q8NFR7 591 aa11.43□□□□□ -0.58
HDLBP-228ENST00000459788 CRYGNQ8WXF5 182 aa11.43□□□□□ -0.58
HDLBP-228ENST00000459788 APBB2Q92870 758 aa11.43□□□□□ -0.58
HDLBP-228ENST00000459788 BRF1Q92994 677 aa11.43□□□□□ -0.58
HDLBP-228ENST00000459788 TCEANC2Q96MN5 208 aa11.43□□□□□ -0.58
HDLBP-228ENST00000459788 SDF4Q9BRK5 362 aa11.43□□□□□ -0.58
HDLBP-228ENST00000459788 ANO3Q9BYT9 981 aa11.43□□□□□ -0.58
HDLBP-228ENST00000459788 NKX2-4Q9H2Z4 354 aa11.43□□□□□ -0.58
HDLBP-228ENST00000459788 JPH1Q9HDC5 661 aaPredicted RBP11.43□□□□□ -0.58
HDLBP-228ENST00000459788 SH3GLB2Q9NR46 395 aa11.43□□□□□ -0.58
HDLBP-228ENST00000459788 KCNH7Q9NS40 1196 aa11.43□□□□□ -0.58
HDLBP-228ENST00000459788 PPP4R2Q9NY27 417 aa11.43□□□□□ -0.58
HDLBP-228ENST00000459788 SLC9A2Q9UBY0 812 aa11.43□□□□□ -0.58
HDLBP-228ENST00000459788 YBX2Q9Y2T7 364 aaKnown RBP11.43□□□□□ -0.58
HDLBP-228ENST00000459788 EYSQ5T1H1 3165 aa11.43□□□□□ -0.58
HDLBP-228ENST00000459788 TTC3P53804 2025 aa11.43□□□□□ -0.58
HDLBP-228ENST00000459788 NLRC5Q86WI3 1866 aa11.42□□□□□ -0.58
HDLBP-228ENST00000459788 GSTTP1A0A1W2PQM5 241 aa11.42□□□□□ -0.58
HDLBP-228ENST00000459788 hCG_1642624A0A1W2PR95 340 aa11.42□□□□□ -0.58
HDLBP-228ENST00000459788 MBLAC1A4D2B0 266 aaPredicted RBP11.42□□□□□ -0.58
HDLBP-228ENST00000459788 ATP9AO75110 1047 aa11.42□□□□□ -0.58
HDLBP-228ENST00000459788 ATG7O95352 703 aa11.42□□□□□ -0.58
HDLBP-228ENST00000459788 ADD1P35611 737 aaKnown RBP11.42□□□□□ -0.58
HDLBP-228ENST00000459788 SETQ01105 290 aaPredicted RBP11.42□□□□□ -0.58
HDLBP-228ENST00000459788 APOBRQ0VD83 1088 aa11.42□□□□□ -0.58
HDLBP-228ENST00000459788 NTRK3Q16288 839 aa11.42□□□□□ -0.58
HDLBP-228ENST00000459788 PLEKHG4Q58EX7 1191 aa11.42□□□□□ -0.58
HDLBP-228ENST00000459788 TYW1BQ6NUM6 668 aa11.42□□□□□ -0.58
HDLBP-228ENST00000459788 RSPH3Q86UC2 560 aa11.42□□□□□ -0.58
HDLBP-228ENST00000459788 RAB11FIP4Q86YS3 637 aa11.42□□□□□ -0.58
HDLBP-228ENST00000459788 ZNF274Q96GC6 653 aaPredicted RBP11.42□□□□□ -0.58
HDLBP-228ENST00000459788 ZFP91Q96JP5 570 aaPredicted RBP11.42□□□□□ -0.58
HDLBP-228ENST00000459788 C22orf23Q9BZE7 217 aa11.42□□□□□ -0.58
HDLBP-228ENST00000459788 BCAS3Q9H6U6 928 aa11.42□□□□□ -0.58
HDLBP-228ENST00000459788 LMCD1Q9NZU5 365 aa11.42□□□□□ -0.58
HDLBP-228ENST00000459788 CYP46A1Q9Y6A2 500 aa11.42□□□□□ -0.58
HDLBP-228ENST00000459788 SQORQ9Y6N5 450 aa11.42□□□□□ -0.58
HDLBP-228ENST00000459788 TREHO43280 583 aa11.41□□□□□ -0.58
HDLBP-228ENST00000459788 GJB5O95377 273 aa11.41□□□□□ -0.58
HDLBP-228ENST00000459788 THPOP40225 353 aa11.41□□□□□ -0.58
HDLBP-228ENST00000459788 ARHGAP4P98171 946 aa11.41□□□□□ -0.58
HDLBP-228ENST00000459788 MKRN4PQ13434 485 aaPredicted RBP11.41□□□□□ -0.58
HDLBP-228ENST00000459788 HIC1Q14526 733 aa11.41□□□□□ -0.58
HDLBP-228ENST00000459788 MBTPS1Q14703 1052 aa11.41□□□□□ -0.58
HDLBP-228ENST00000459788 REXO1Q8N1G1 1221 aaKnown RBP11.41□□□□□ -0.58
HDLBP-228ENST00000459788 PPP1R13LQ8WUF5 828 aa11.41□□□□□ -0.58
HDLBP-228ENST00000459788 LMBR1Q8WVP7 490 aa11.41□□□□□ -0.58
HDLBP-228ENST00000459788 SEPT8Q92599 483 aa11.41□□□□□ -0.58
HDLBP-228ENST00000459788 SYMPKQ92797 1274 aaKnown RBP11.41□□□□□ -0.58
HDLBP-228ENST00000459788 RAD9AQ99638 391 aa11.41□□□□□ -0.58
HDLBP-228ENST00000459788 AZI2Q9H6S1 392 aa11.41□□□□□ -0.58
HDLBP-228ENST00000459788 TBC1D22BQ9NU19 505 aa11.41□□□□□ -0.58
HDLBP-228ENST00000459788 BRWD1Q9NSI6 2320 aa11.41□□□□□ -0.58
HDLBP-228ENST00000459788 IGKV6D-21A0A0A0MT36 114 aa11.4□□□□□ -0.58
HDLBP-228ENST00000459788 DLL1O00548 723 aa11.4□□□□□ -0.58
HDLBP-228ENST00000459788 TLL1O43897 1013 aa11.4□□□□□ -0.58
HDLBP-228ENST00000459788 AMHP03971 560 aa11.4□□□□□ -0.58
HDLBP-228ENST00000459788 CA3P07451 260 aa11.4□□□□□ -0.58
HDLBP-228ENST00000459788 PDIA3P30101 505 aaKnown RBP11.4□□□□□ -0.58
HDLBP-228ENST00000459788 CIITAP33076 1130 aa11.4□□□□□ -0.58
HDLBP-228ENST00000459788 RABGGTBP53611 331 aa11.4□□□□□ -0.58
HDLBP-228ENST00000459788 ANAPC15P60006 121 aa11.4□□□□□ -0.58
HDLBP-228ENST00000459788 ZNF200P98182 395 aaPredicted RBP11.4□□□□□ -0.58
HDLBP-228ENST00000459788 PPFIA1Q13136 1202 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms