RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 ARHGAP4P98171 946 aa24.75■■□□□ 1.55
CPNE1-220ENST00000458038 UTP14CQ5TAP6 766 aaKnown RBP24.75■■□□□ 1.55
CPNE1-220ENST00000458038 TAF2Q6P1X5 1199 aa24.75■■□□□ 1.55
CPNE1-220ENST00000458038 LMBR1Q8WVP7 490 aa24.75■■□□□ 1.55
CPNE1-220ENST00000458038 C17orf80Q9BSJ5 609 aa24.75■■□□□ 1.55
CPNE1-220ENST00000458038 CTSHP09668 335 aa24.74■■□□□ 1.55
CPNE1-220ENST00000458038 EPC2Q52LR7 807 aa24.74■■□□□ 1.55
CPNE1-220ENST00000458038 RSPH3Q86UC2 560 aa24.74■■□□□ 1.55
CPNE1-220ENST00000458038 TRIM50Q86XT4 487 aa24.74■■□□□ 1.55
CPNE1-220ENST00000458038 TEX2Q8IWB9 1127 aa24.74■■□□□ 1.55
CPNE1-220ENST00000458038 SEPT1Q8WYJ6 367 aa24.74■■□□□ 1.55
CPNE1-220ENST00000458038 MYL10Q9BUA6 226 aa24.74■■□□□ 1.55
CPNE1-220ENST00000458038 IFIH1Q9BYX4 1025 aaKnown RBP24.74■■□□□ 1.55
CPNE1-220ENST00000458038 COL4A6Q14031 1691 aa24.74■■□□□ 1.55
CPNE1-220ENST00000458038 H3BNC9 293 aa24.73■■□□□ 1.55
CPNE1-220ENST00000458038 RPLP2P05387 115 aaKnown RBP24.73■■□□□ 1.55
CPNE1-220ENST00000458038 LEXMQ3ZCV2 418 aa24.73■■□□□ 1.55
CPNE1-220ENST00000458038 SRBD1Q8N5C6 995 aaKnown RBP24.73■■□□□ 1.55
CPNE1-220ENST00000458038 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.72■■□□□ 1.55
CPNE1-220ENST00000458038 SH2B2O14492 632 aaPredicted RBP24.72■■□□□ 1.55
CPNE1-220ENST00000458038 TCF7P36402 384 aaPredicted RBP24.72■■□□□ 1.55
CPNE1-220ENST00000458038 SP4Q02446 784 aa24.72■■□□□ 1.55
CPNE1-220ENST00000458038 PUS10Q3MIT2 529 aaKnown RBP24.72■■□□□ 1.55
CPNE1-220ENST00000458038 TIGD5Q53EQ6 642 aa24.72■■□□□ 1.55
CPNE1-220ENST00000458038 ERAP1Q9NZ08 941 aa24.72■■□□□ 1.55
CPNE1-220ENST00000458038 RALGAPA2Q2PPJ7 1873 aa24.71■■□□□ 1.55
CPNE1-220ENST00000458038 NLRC5Q86WI3 1866 aa24.71■■□□□ 1.55
CPNE1-220ENST00000458038 UPP2O95045 317 aa24.71■■□□□ 1.55
CPNE1-220ENST00000458038 PLEKHA8P1O95397 391 aa24.71■■□□□ 1.55
CPNE1-220ENST00000458038 KCNA2P16389 499 aa24.71■■□□□ 1.55
CPNE1-220ENST00000458038 TMEM192Q8IY95 271 aa24.71■■□□□ 1.55
CPNE1-220ENST00000458038 TNPO1Q92973 898 aaKnown RBP24.71■■□□□ 1.55
CPNE1-220ENST00000458038 SMARCAD1Q9H4L7 1026 aa24.71■■□□□ 1.55
CPNE1-220ENST00000458038 EHMT1Q9H9B1 1298 aa24.71■■□□□ 1.55
CPNE1-220ENST00000458038 SLC12A7Q9Y666 1083 aa24.71■■□□□ 1.55
CPNE1-220ENST00000458038 SPDYE3A6NKU9 549 aa24.7■■□□□ 1.54
CPNE1-220ENST00000458038 MTMR1Q13613 665 aa24.7■■□□□ 1.54
CPNE1-220ENST00000458038 IL17RAQ96F46 866 aa24.7■■□□□ 1.54
CPNE1-220ENST00000458038 RWDD3Q9Y3V2 267 aa24.7■■□□□ 1.54
CPNE1-220ENST00000458038 ARIH1Q9Y4X5 557 aaPredicted RBP24.7■■□□□ 1.54
CPNE1-220ENST00000458038 UBIAD1Q9Y5Z9 338 aa24.7■■□□□ 1.54
CPNE1-220ENST00000458038 MYO7AQ13402 2215 aa24.7■■□□□ 1.54
CPNE1-220ENST00000458038 ATP9AO75110 1047 aa24.69■■□□□ 1.54
CPNE1-220ENST00000458038 CHRNA1P02708 482 aa24.69■■□□□ 1.54
CPNE1-220ENST00000458038 ITGB5P18084 799 aa24.69■■□□□ 1.54
CPNE1-220ENST00000458038 PPFIA1Q13136 1202 aa24.69■■□□□ 1.54
CPNE1-220ENST00000458038 GPM6BQ13491 265 aa24.69■■□□□ 1.54
CPNE1-220ENST00000458038 FANCBQ8NB91 859 aa24.69■■□□□ 1.54
CPNE1-220ENST00000458038 GLG1Q92896 1179 aa24.69■■□□□ 1.54
CPNE1-220ENST00000458038 OSBPL7Q9BZF2 842 aa24.69■■□□□ 1.54
CPNE1-220ENST00000458038 LSG1Q9H089 658 aaKnown RBP24.69■■□□□ 1.54
CPNE1-220ENST00000458038 EPHX3Q9H6B9 360 aa24.69■■□□□ 1.54
CPNE1-220ENST00000458038 TTC3P53804 2025 aa24.68■■□□□ 1.54
CPNE1-220ENST00000458038 GSTTP1A0A1W2PQM5 241 aa24.68■■□□□ 1.54
CPNE1-220ENST00000458038 MBLAC1A4D2B0 266 aaPredicted RBP24.68■■□□□ 1.54
CPNE1-220ENST00000458038 RRN3P2A6NIE6 340 aa24.68■■□□□ 1.54
CPNE1-220ENST00000458038 SLC27A2O14975 620 aa24.68■■□□□ 1.54
CPNE1-220ENST00000458038 NCK2O43639 380 aa24.68■■□□□ 1.54
CPNE1-220ENST00000458038 RB1P06400 928 aa24.68■■□□□ 1.54
CPNE1-220ENST00000458038 KCNA5P22460 613 aa24.68■■□□□ 1.54
CPNE1-220ENST00000458038 TMEM31Q5JXX7 168 aa24.68■■□□□ 1.54
CPNE1-220ENST00000458038 FIBCD1Q8N539 461 aa24.68■■□□□ 1.54
CPNE1-220ENST00000458038 BANK1Q8NDB2 785 aa24.68■■□□□ 1.54
CPNE1-220ENST00000458038 JADE2Q9NQC1 790 aa24.68■■□□□ 1.54
CPNE1-220ENST00000458038 TUBE1Q9UJT0 475 aa24.68■■□□□ 1.54
CPNE1-220ENST00000458038 TELO2Q9Y4R8 837 aa24.68■■□□□ 1.54
CPNE1-220ENST00000458038 NECTIN1Q15223 517 aa24.67■■□□□ 1.54
CPNE1-220ENST00000458038 GRIK4Q16099 956 aa24.67■■□□□ 1.54
CPNE1-220ENST00000458038 SYNE3Q6ZMZ3 975 aa24.67■■□□□ 1.54
CPNE1-220ENST00000458038 SGMS1Q86VZ5 419 aa24.67■■□□□ 1.54
CPNE1-220ENST00000458038 FAM178BQ8IXR5 827 aa24.67■■□□□ 1.54
CPNE1-220ENST00000458038 LRFN3Q9BTN0 628 aa24.67■■□□□ 1.54
CPNE1-220ENST00000458038 PCDHA6Q9UN73 950 aa24.67■■□□□ 1.54
CPNE1-220ENST00000458038 PCDHA8Q9Y5H6 950 aa24.67■■□□□ 1.54
CPNE1-220ENST00000458038 C5orf67F2Z3F1 127 aa24.66■■□□□ 1.54
CPNE1-220ENST00000458038 GPR37L1O60883 481 aa24.66■■□□□ 1.54
CPNE1-220ENST00000458038 GHRP10912 638 aa24.66■■□□□ 1.54
CPNE1-220ENST00000458038 PLA2G5P39877 138 aa24.66■■□□□ 1.54
CPNE1-220ENST00000458038 RUFY4Q6ZNE9 571 aa24.66■■□□□ 1.54
CPNE1-220ENST00000458038 TMTC3Q6ZXV5 915 aa24.66■■□□□ 1.54
CPNE1-220ENST00000458038 CMTR1Q8N1G2 835 aaKnown RBP24.66■■□□□ 1.54
CPNE1-220ENST00000458038 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.66■■□□□ 1.54
CPNE1-220ENST00000458038 NEK9Q8TD19 979 aa24.66■■□□□ 1.54
CPNE1-220ENST00000458038 FAM122AQ96E09 287 aa24.66■■□□□ 1.54
CPNE1-220ENST00000458038 ESYT1Q9BSJ8 1104 aa24.66■■□□□ 1.54
CPNE1-220ENST00000458038 LMAN2LQ9H0V9 348 aa24.66■■□□□ 1.54
CPNE1-220ENST00000458038 NSUN3Q9H649 340 aaKnown RBP24.66■■□□□ 1.54
CPNE1-220ENST00000458038 RAPGEFL1Q9UHV5 662 aa24.66■■□□□ 1.54
CPNE1-220ENST00000458038 FAM50BQ9Y247 325 aa24.66■■□□□ 1.54
CPNE1-220ENST00000458038 SQORQ9Y6N5 450 aa24.66■■□□□ 1.54
CPNE1-220ENST00000458038 MGAT3Q09327 533 aa24.65■■□□□ 1.54
CPNE1-220ENST00000458038 LPIN1Q14693 890 aa24.65■■□□□ 1.54
CPNE1-220ENST00000458038 RNF20Q5VTR2 975 aa24.65■■□□□ 1.54
CPNE1-220ENST00000458038 CREB3L3Q68CJ9 461 aa24.65■■□□□ 1.54
CPNE1-220ENST00000458038 PTCRAQ6ISU1 281 aaPredicted RBP24.65■■□□□ 1.54
CPNE1-220ENST00000458038 FAM43BQ6ZT52 329 aaPredicted RBP24.65■■□□□ 1.54
CPNE1-220ENST00000458038 PABPC5Q96DU9 382 aaKnown RBP24.65■■□□□ 1.54
CPNE1-220ENST00000458038 C11orf84Q9BUA3 381 aaPredicted RBP24.65■■□□□ 1.54
CPNE1-220ENST00000458038 AZI2Q9H6S1 392 aa24.65■■□□□ 1.54
CPNE1-220ENST00000458038 GRXCR2A6NFK2 248 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms