RNA–Protein interactions for RNA: ENST00000457953.6

KCNMA1-216, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-216ENST00000457953 PCDHA1Q9Y5I3 950 aa14.71□□□□□ -0.05
KCNMA1-216ENST00000457953 CD19P15391 556 aa14.71□□□□□ -0.06
KCNMA1-216ENST00000457953 ATF7P17544 494 aaPredicted RBP14.71□□□□□ -0.06
KCNMA1-216ENST00000457953 ICA1Q05084 483 aa14.71□□□□□ -0.06
KCNMA1-216ENST00000457953 P2RX5Q93086 422 aa14.71□□□□□ -0.06
KCNMA1-216ENST00000457953 PP2D1A8MPX8 630 aa14.7□□□□□ -0.06
KCNMA1-216ENST00000457953 CLIC2O15247 247 aa14.7□□□□□ -0.06
KCNMA1-216ENST00000457953 FDPSP14324 419 aaKnown RBP14.7□□□□□ -0.06
KCNMA1-216ENST00000457953 CDK8P49336 464 aa14.7□□□□□ -0.06
KCNMA1-216ENST00000457953 MYO1EQ12965 1108 aa14.7□□□□□ -0.06
KCNMA1-216ENST00000457953 PABPC4Q13310 644 aaKnown RBP eCLIP14.7□□□□□ -0.06
KCNMA1-216ENST00000457953 PPP2R5CQ13362 524 aa14.7□□□□□ -0.06
KCNMA1-216ENST00000457953 CASC4Q6P4E1 433 aa14.7□□□□□ -0.06
KCNMA1-216ENST00000457953 FOXR1Q6PIV2 292 aa14.7□□□□□ -0.06
KCNMA1-216ENST00000457953 SHC4Q6S5L8 630 aa14.7□□□□□ -0.06
KCNMA1-216ENST00000457953 EP400NLQ6ZTU2 488 aa14.7□□□□□ -0.06
KCNMA1-216ENST00000457953 NOA1Q8NC60 698 aaKnown RBP14.7□□□□□ -0.06
KCNMA1-216ENST00000457953 GSDMBQ8TAX9 411 aa14.7□□□□□ -0.06
KCNMA1-216ENST00000457953 FOXP1Q9H334 677 aaPredicted RBP14.7□□□□□ -0.06
KCNMA1-216ENST00000457953 SMARCAL1Q9NZC9 954 aa14.7□□□□□ -0.06
KCNMA1-216ENST00000457953 THRAP3Q9Y2W1 955 aaKnown RBP14.7□□□□□ -0.06
KCNMA1-216ENST00000457953 AFDNP55196 1824 aaKnown RBP14.7□□□□□ -0.06
KCNMA1-216ENST00000457953 BRD2P25440 801 aaKnown RBP14.7□□□□□ -0.06
KCNMA1-216ENST00000457953 ZBED6P86452 979 aa14.7□□□□□ -0.06
KCNMA1-216ENST00000457953 NUGGCQ68CJ6 796 aa14.7□□□□□ -0.06
KCNMA1-216ENST00000457953 YIPF3Q9GZM5 350 aa14.7□□□□□ -0.06
KCNMA1-216ENST00000457953 ZNF408Q9H9D4 720 aa14.7□□□□□ -0.06
KCNMA1-216ENST00000457953 H3BQF6 201 aa14.7□□□□□ -0.06
KCNMA1-216ENST00000457953 SUN1O94901 812 aa14.7□□□□□ -0.06
KCNMA1-216ENST00000457953 EXOC3L4Q17RC7 722 aa14.7□□□□□ -0.06
KCNMA1-216ENST00000457953 HAUS3Q68CZ6 603 aa14.7□□□□□ -0.06
KCNMA1-216ENST00000457953 INTS5Q6P9B9 1019 aaKnown RBP14.7□□□□□ -0.06
KCNMA1-216ENST00000457953 ZNF354CQ86Y25 554 aa14.7□□□□□ -0.06
KCNMA1-216ENST00000457953 TBCKQ8TEA7 893 aa14.7□□□□□ -0.06
KCNMA1-216ENST00000457953 GJD4Q96KN9 370 aaPredicted RBP14.7□□□□□ -0.06
KCNMA1-216ENST00000457953 CSRNP1Q96S65 589 aa14.7□□□□□ -0.06
KCNMA1-216ENST00000457953 ABHD10Q9NUJ1 306 aa14.7□□□□□ -0.06
KCNMA1-216ENST00000457953 PANK4Q9NVE7 773 aa14.7□□□□□ -0.06
KCNMA1-216ENST00000457953 KIAA1024Q9UPX6 916 aa14.7□□□□□ -0.06
KCNMA1-216ENST00000457953 MRFAP1Q9Y605 127 aa14.7□□□□□ -0.06
KCNMA1-216ENST00000457953 ATP1A1P05023 1023 aaKnown RBP14.69□□□□□ -0.06
KCNMA1-216ENST00000457953 HDLBPQ00341 1268 aaKnown RBP14.69□□□□□ -0.06
KCNMA1-216ENST00000457953 PPP2R5BQ15173 497 aa14.69□□□□□ -0.06
KCNMA1-216ENST00000457953 FAM47EQ6ZV65 393 aa14.69□□□□□ -0.06
KCNMA1-216ENST00000457953 ALS2Q96Q42 1657 aa14.69□□□□□ -0.06
KCNMA1-216ENST00000457953 LRRD1A4D1F6 860 aa14.69□□□□□ -0.06
KCNMA1-216ENST00000457953 CHUKO15111 745 aa14.69□□□□□ -0.06
KCNMA1-216ENST00000457953 NTSR2O95665 410 aa14.69□□□□□ -0.06
KCNMA1-216ENST00000457953 NR2F2P24468 414 aa14.69□□□□□ -0.06
KCNMA1-216ENST00000457953 RCN2Q14257 317 aa14.69□□□□□ -0.06
KCNMA1-216ENST00000457953 SLFN13Q68D06 897 aa14.69□□□□□ -0.06
KCNMA1-216ENST00000457953 NEK8Q86SG6 692 aa14.69□□□□□ -0.06
KCNMA1-216ENST00000457953 VCX3BQ9H321 246 aa14.69□□□□□ -0.06
KCNMA1-216ENST00000457953 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.69□□□□□ -0.06
KCNMA1-216ENST00000457953 GINS2Q9Y248 185 aa14.69□□□□□ -0.06
KCNMA1-216ENST00000457953 PLAAQ9Y263 795 aa14.69□□□□□ -0.06
KCNMA1-216ENST00000457953 PCDHA13Q9Y5I0 950 aa14.69□□□□□ -0.06
KCNMA1-216ENST00000457953 SRPRBQ9Y5M8 271 aaKnown RBP14.69□□□□□ -0.06
KCNMA1-216ENST00000457953 CALUO43852 315 aaPredicted RBP14.69□□□□□ -0.06
KCNMA1-216ENST00000457953 GPSM2P81274 684 aa14.69□□□□□ -0.06
KCNMA1-216ENST00000457953 FUT8Q9BYC5 575 aa14.69□□□□□ -0.06
KCNMA1-216ENST00000457953 KDM4FA0A1W2PPD8 638 aa14.68□□□□□ -0.06
KCNMA1-216ENST00000457953 ACSL3O95573 720 aa14.68□□□□□ -0.06
KCNMA1-216ENST00000457953 PTPREP23469 700 aa14.68□□□□□ -0.06
KCNMA1-216ENST00000457953 MAN1A1P33908 653 aa14.68□□□□□ -0.06
KCNMA1-216ENST00000457953 TAF11Q15544 211 aa14.68□□□□□ -0.06
KCNMA1-216ENST00000457953 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.68□□□□□ -0.06
KCNMA1-216ENST00000457953 PLCB1Q9NQ66 1216 aa14.68□□□□□ -0.06
KCNMA1-216ENST00000457953 EEF1GP26641 437 aaKnown RBP14.68□□□□□ -0.06
KCNMA1-216ENST00000457953 COG7P83436 770 aa14.68□□□□□ -0.06
KCNMA1-216ENST00000457953 TDRD3Q9H7E2 651 aaKnown RBP14.68□□□□□ -0.06
KCNMA1-216ENST00000457953 CLEC11AQ9Y240 323 aa14.68□□□□□ -0.06
KCNMA1-216ENST00000457953 SNX24Q9Y343 169 aa14.68□□□□□ -0.06
KCNMA1-216ENST00000457953 BBOX1O75936 387 aa14.68□□□□□ -0.06
KCNMA1-216ENST00000457953 FMR1Q06787 632 aaKnown RBP eCLIP14.68□□□□□ -0.06
KCNMA1-216ENST00000457953 SPATS2Q86XZ4 545 aaKnown RBP14.68□□□□□ -0.06
KCNMA1-216ENST00000457953 MAK16Q9BXY0 300 aaKnown RBP14.68□□□□□ -0.06
KCNMA1-216ENST00000457953 DDX47Q9H0S4 455 aaKnown RBP14.68□□□□□ -0.06
KCNMA1-216ENST00000457953 NUCKS1Q9H1E3 243 aaKnown RBP14.68□□□□□ -0.06
KCNMA1-216ENST00000457953 MEIS1O00470 390 aa14.67□□□□□ -0.06
KCNMA1-216ENST00000457953 GFPT2O94808 682 aa14.67□□□□□ -0.06
KCNMA1-216ENST00000457953 CHRNA5P30532 468 aa14.67□□□□□ -0.06
KCNMA1-216ENST00000457953 FXR1P51114 621 aaKnown RBP eCLIP14.67□□□□□ -0.06
KCNMA1-216ENST00000457953 NKX1-1Q15270 411 aaPredicted RBP14.67□□□□□ -0.06
KCNMA1-216ENST00000457953 WDR44Q5JSH3 913 aa14.67□□□□□ -0.06
KCNMA1-216ENST00000457953 ZNF658Q5TYW1 1059 aaPredicted RBP14.67□□□□□ -0.06
KCNMA1-216ENST00000457953 MMS19Q96T76 1030 aa14.67□□□□□ -0.06
KCNMA1-216ENST00000457953 TMEM47Q9BQJ4 181 aa14.67□□□□□ -0.06
KCNMA1-216ENST00000457953 NDST4Q9H3R1 872 aa14.67□□□□□ -0.06
KCNMA1-216ENST00000457953 ZNF148Q9UQR1 794 aa14.67□□□□□ -0.06
KCNMA1-216ENST00000457953 ARFGEF2Q9Y6D5 1785 aa14.67□□□□□ -0.06
KCNMA1-216ENST00000457953 USP17L5A8MUK1 530 aa14.67□□□□□ -0.06
KCNMA1-216ENST00000457953 KRT14P02533 472 aa14.67□□□□□ -0.06
KCNMA1-216ENST00000457953 CASP7P55210 303 aa14.67□□□□□ -0.06
KCNMA1-216ENST00000457953 GRIN1Q05586 938 aa14.67□□□□□ -0.06
KCNMA1-216ENST00000457953 GEN1Q17RS7 908 aa14.67□□□□□ -0.06
KCNMA1-216ENST00000457953 GNPTABQ3T906 1256 aa14.67□□□□□ -0.06
KCNMA1-216ENST00000457953 MB21D1Q8N884 522 aa14.67□□□□□ -0.06
KCNMA1-216ENST00000457953 LAMB4A4D0S4 1761 aa14.67□□□□□ -0.06
KCNMA1-216ENST00000457953 DDAH1O94760 285 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms